RNA–Protein interactions for RNA: ENST00000361642.9

ZEB1-202, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZEB1, Length 5,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-202ENST00000361642 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
ZEB1-202ENST00000361642 CCDC180Q9P1Z9 1646 aa10.01□□□□□ -0.81
ZEB1-202ENST00000361642 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
ZEB1-202ENST00000361642 ABCC9O60706 1549 aa9.76□□□□□ -0.85
ZEB1-202ENST00000361642 RB1CC1Q8TDY2 1594 aa9.52□□□□□ -0.89
ZEB1-202ENST00000361642 NACADO15069 1562 aa9.46□□□□□ -0.89
ZEB1-202ENST00000361642 MYO15BQ96JP2 1530 aa9.3□□□□□ -0.92
ZEB1-202ENST00000361642 DCAF1Q9Y4B6 1507 aa9.26□□□□□ -0.93
ZEB1-202ENST00000361642 ZCCHC6Q5VYS8 1495 aaKnown RBP9.26□□□□□ -0.93
ZEB1-202ENST00000361642 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
ZEB1-202ENST00000361642 SHROOM4Q9ULL8 1493 aa9.16□□□□□ -0.94
ZEB1-202ENST00000361642 FAM9AQ8IZU1 332 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-202ENST00000361642 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
ZEB1-202ENST00000361642 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
ZEB1-202ENST00000361642 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
ZEB1-202ENST00000361642 UNC13AQ9UPW8 1703 aa8.88□□□□□ -0.99
ZEB1-202ENST00000361642 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
ZEB1-202ENST00000361642 SMARCA2P51531 1590 aa8.79□□□□□ -1
ZEB1-202ENST00000361642 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1
ZEB1-202ENST00000361642 BAZ1AQ9NRL2 1556 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-202ENST00000361642 CC2D2AQ9P2K1 1620 aa8.75□□□□□ -1.01
ZEB1-202ENST00000361642 AEBP2Q6ZN18 517 aaPredicted RBP8.71□□□□□ -1.01
ZEB1-202ENST00000361642 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
ZEB1-202ENST00000361642 PDS5BQ9NTI5 1447 aa8.68□□□□□ -1.02
ZEB1-202ENST00000361642 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
ZEB1-202ENST00000361642 TRIM41Q8WV44 630 aa8.64□□□□□ -1.03
ZEB1-202ENST00000361642 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
ZEB1-202ENST00000361642 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
ZEB1-202ENST00000361642 CUX2O14529 1486 aa8.6□□□□□ -1.03
ZEB1-202ENST00000361642 NCAPD3P42695 1498 aa8.6□□□□□ -1.03
ZEB1-202ENST00000361642 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
ZEB1-202ENST00000361642 ATAD2BQ9ULI0 1458 aa8.58□□□□□ -1.04
ZEB1-202ENST00000361642 TRHP20396 242 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-202ENST00000361642 FBLN2P98095 1184 aa8.57□□□□□ -1.04
ZEB1-202ENST00000361642 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
ZEB1-202ENST00000361642 SUPT5HO00267 1087 aaKnown RBP8.52□□□□□ -1.05
ZEB1-202ENST00000361642 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
ZEB1-202ENST00000361642 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
ZEB1-202ENST00000361642 PEG3Q9GZU2 1588 aa8.49□□□□□ -1.05
ZEB1-202ENST00000361642 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
ZEB1-202ENST00000361642 MROH2BQ7Z745 1585 aa8.48□□□□□ -1.05
ZEB1-202ENST00000361642 CHMP7Q8WUX9 453 aaPredicted RBP8.45□□□□□ -1.06
ZEB1-202ENST00000361642 RSF1Q96T23 1441 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-202ENST00000361642 CEP164Q9UPV0 1460 aa8.43□□□□□ -1.06
ZEB1-202ENST00000361642 CADPSQ9ULU8 1353 aa8.43□□□□□ -1.06
ZEB1-202ENST00000361642 ABCC8Q09428 1581 aa8.42□□□□□ -1.06
ZEB1-202ENST00000361642 WIZO95785 1651 aa8.42□□□□□ -1.06
ZEB1-202ENST00000361642 MRC2Q9UBG0 1479 aa8.39□□□□□ -1.07
ZEB1-202ENST00000361642 FANCD2Q9BXW9 1451 aa8.34□□□□□ -1.07
ZEB1-202ENST00000361642 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
ZEB1-202ENST00000361642 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
ZEB1-202ENST00000361642 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
ZEB1-202ENST00000361642 CFTRP13569 1480 aa8.29□□□□□ -1.08
ZEB1-202ENST00000361642 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
ZEB1-202ENST00000361642 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
ZEB1-202ENST00000361642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-202ENST00000361642 HNRNPUL2Q1KMD3 747 aaKnown RBP8.26□□□□□ -1.09
ZEB1-202ENST00000361642 NESP48681 1621 aa8.24□□□□□ -1.09
ZEB1-202ENST00000361642 KIF21AQ7Z4S6 1674 aa8.23□□□□□ -1.09
ZEB1-202ENST00000361642 WDR62O43379 1518 aa8.22□□□□□ -1.09
ZEB1-202ENST00000361642 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
ZEB1-202ENST00000361642 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
ZEB1-202ENST00000361642 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
ZEB1-202ENST00000361642 WDR97A6NE52 1622 aa8.2□□□□□ -1.1
ZEB1-202ENST00000361642 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
ZEB1-202ENST00000361642 SOGA1O94964 1423 aa8.18□□□□□ -1.1
ZEB1-202ENST00000361642 THOC2Q8NI27 1593 aaKnown RBP8.17□□□□□ -1.1
ZEB1-202ENST00000361642 APLP2Q06481 763 aa8.17□□□□□ -1.1
ZEB1-202ENST00000361642 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
ZEB1-202ENST00000361642 CDK11AQ9UQ88 783 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-202ENST00000361642 CARMIL2Q6F5E8 1435 aa8.13□□□□□ -1.11
ZEB1-202ENST00000361642 ATP1B4Q9UN42 357 aaPredicted RBP8.12□□□□□ -1.11
ZEB1-202ENST00000361642 KIF27Q86VH2 1401 aa8.1□□□□□ -1.11
ZEB1-202ENST00000361642 GRIN2BQ13224 1484 aa8.09□□□□□ -1.11
ZEB1-202ENST00000361642 URB2Q14146 1524 aaKnown RBP8.09□□□□□ -1.11
ZEB1-202ENST00000361642 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
ZEB1-202ENST00000361642 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
ZEB1-202ENST00000361642 SYNJ1O43426 1573 aa8.07□□□□□ -1.12
ZEB1-202ENST00000361642 MAGI1Q96QZ7 1491 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-202ENST00000361642 FOXD1Q16676 465 aa8.06□□□□□ -1.12
ZEB1-202ENST00000361642 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
ZEB1-202ENST00000361642 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
ZEB1-202ENST00000361642 POLA1P09884 1462 aaPredicted RBP8.03□□□□□ -1.12
ZEB1-202ENST00000361642 EEA1Q15075 1411 aa8.02□□□□□ -1.12
ZEB1-202ENST00000361642 BIVM-ERCC5R4GMW8 1640 aa8.02□□□□□ -1.13
ZEB1-202ENST00000361642 FHAD1B1AJZ9 1412 aa8.01□□□□□ -1.13
ZEB1-202ENST00000361642 SNAPC4Q5SXM2 1469 aa8.01□□□□□ -1.13
ZEB1-202ENST00000361642 CUX1P39880 1505 aa8.01□□□□□ -1.13
ZEB1-202ENST00000361642 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
ZEB1-202ENST00000361642 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
ZEB1-202ENST00000361642 EIF4G3O43432 1585 aaKnown RBP8□□□□□ -1.13
ZEB1-202ENST00000361642 FAM69CQ0P6D2 419 aa8□□□□□ -1.13
ZEB1-202ENST00000361642 TDRD9Q8NDG6 1382 aaKnown RBP7.99□□□□□ -1.13
ZEB1-202ENST00000361642 CUL7Q14999 1698 aa7.99□□□□□ -1.13
ZEB1-202ENST00000361642 ERICH3Q5RHP9 1530 aa7.99□□□□□ -1.13
ZEB1-202ENST00000361642 RAD54L2Q9Y4B4 1467 aa7.99□□□□□ -1.13
ZEB1-202ENST00000361642 AQRO60306 1485 aaKnown RBP eCLIP7.98□□□□□ -1.13
ZEB1-202ENST00000361642 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
ZEB1-202ENST00000361642 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
ZEB1-202ENST00000361642 GOLGA3Q08378 1498 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms