RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-215ENST00000571945 NISCHQ9Y2I1 1504 aa61.7■■■■■ 7.47
ABR-215ENST00000571945 CCDC180Q9P1Z9 1646 aa55.02■■■■■ 6.4
ABR-215ENST00000571945 ABCC9O60706 1549 aa53.56■■■■■ 6.16
ABR-215ENST00000571945 RB1CC1Q8TDY2 1594 aa51.68■■■■■ 5.86
ABR-215ENST00000571945 NACADO15069 1562 aa51.63■■■■■ 5.86
ABR-215ENST00000571945 ZCCHC6Q5VYS8 1495 aaKnown RBP51.45■■■■■ 5.83
ABR-215ENST00000571945 MYO15BQ96JP2 1530 aa51.39■■■■■ 5.82
ABR-215ENST00000571945 DCAF8L2P0C7V8 631 aa51.22■■■■■ 5.79
ABR-215ENST00000571945 DCAF1Q9Y4B6 1507 aa51.16■■■■■ 5.78
ABR-215ENST00000571945 UNC13AQ9UPW8 1703 aa50.56■■■■■ 5.68
ABR-215ENST00000571945 BICRAQ9NZM4 1560 aa50.08■■■■■ 5.61
ABR-215ENST00000571945 SCRIBQ14160 1630 aa50.03■■■■■ 5.6
ABR-215ENST00000571945 PABPN1Q86U42 306 aaKnown RBP eCLIP49.91■■■■■ 5.58
ABR-215ENST00000571945 SHROOM4Q9ULL8 1493 aa49.71■■■■■ 5.55
ABR-215ENST00000571945 DNAJC5BQ9UF47 199 aa49■■■■■ 5.43
ABR-215ENST00000571945 EIF4G1Q04637 1599 aaKnown RBP48.77■■■■■ 5.4
ABR-215ENST00000571945 CC2D2AQ9P2K1 1620 aa48.54■■■■■ 5.36
ABR-215ENST00000571945 CECR2Q9BXF3 1484 aa48.16■■■■■ 5.3
ABR-215ENST00000571945 SMARCA4P51532 1647 aa47.92■■■■■ 5.26
ABR-215ENST00000571945 BAZ1AQ9NRL2 1556 aaPredicted RBP47.88■■■■■ 5.25
ABR-215ENST00000571945 SMARCA2P51531 1590 aa47.61■■■■■ 5.21
ABR-215ENST00000571945 ATAD2BQ9ULI0 1458 aa47.59■■■■■ 5.21
ABR-215ENST00000571945 NCAPD3P42695 1498 aa47.57■■■■■ 5.21
ABR-215ENST00000571945 PEG3Q9GZU2 1588 aa47.51■■■■■ 5.2
ABR-215ENST00000571945 MROH2BQ7Z745 1585 aa47.5■■■■■ 5.19
ABR-215ENST00000571945 HMGXB3Q12766 1538 aa47.45■■■■■ 5.19
ABR-215ENST00000571945 BAZ1BQ9UIG0 1483 aaKnown RBP47.21■■■■■ 5.15
ABR-215ENST00000571945 WIZO95785 1651 aa47.02■■■■■ 5.12
ABR-215ENST00000571945 RSF1Q96T23 1441 aaPredicted RBP46.95■■■■■ 5.11
ABR-215ENST00000571945 TOP2AP11388 1531 aaKnown RBP46.59■■■■■ 5.05
ABR-215ENST00000571945 LAMC3Q9Y6N6 1575 aa46.39■■■■■ 5.02
ABR-215ENST00000571945 NESP48681 1621 aa46.35■■■■■ 5.01
ABR-215ENST00000571945 ERCC6Q03468 1493 aa46.21■■■■■ 4.99
ABR-215ENST00000571945 CADPSQ9ULU8 1353 aa46.14■■■■■ 4.98
ABR-215ENST00000571945 PDS5BQ9NTI5 1447 aa45.99■■■■■ 4.95
ABR-215ENST00000571945 KIF21AQ7Z4S6 1674 aa45.95■■■■■ 4.95
ABR-215ENST00000571945 CCDC88BA6NC98 1476 aa45.92■■■■■ 4.94
ABR-215ENST00000571945 CFTRP13569 1480 aa45.92■■■■■ 4.94
ABR-215ENST00000571945 THOC2Q8NI27 1593 aaKnown RBP45.81■■■■■ 4.92
ABR-215ENST00000571945 CUX2O14529 1486 aa45.8■■■■■ 4.92
ABR-215ENST00000571945 PRDM2Q13029 1718 aa45.78■■■■■ 4.92
ABR-215ENST00000571945 FANCD2Q9BXW9 1451 aa45.64■■■■■ 4.9
ABR-215ENST00000571945 CEP164Q9UPV0 1460 aa45.61■■■■■ 4.89
ABR-215ENST00000571945 SUPT5HO00267 1087 aaKnown RBP45.56■■■■■ 4.88
ABR-215ENST00000571945 MRC2Q9UBG0 1479 aa45.55■■■■■ 4.88
ABR-215ENST00000571945 WDR62O43379 1518 aa45.45■■■■■ 4.87
ABR-215ENST00000571945 URB2Q14146 1524 aaKnown RBP45.18■■■■■ 4.82
ABR-215ENST00000571945 ABCC8Q09428 1581 aa44.98■■■■■ 4.79
ABR-215ENST00000571945 DNMBPQ6XZF7 1577 aa44.94■■■■■ 4.79
ABR-215ENST00000571945 TOPBP1Q92547 1522 aa44.93■■■■■ 4.78
ABR-215ENST00000571945 IFT140Q96RY7 1462 aa44.66■■■■■ 4.74
ABR-215ENST00000571945 CUX1P39880 1505 aa44.59■■■■■ 4.73
ABR-215ENST00000571945 POLA1P09884 1462 aaPredicted RBP44.54■■■■■ 4.72
ABR-215ENST00000571945 TARBP1Q13395 1621 aaKnown RBP44.49■■■■■ 4.71
ABR-215ENST00000571945 FGD5Q6ZNL6 1462 aa44.43■■■■■ 4.7
ABR-215ENST00000571945 ZNF608Q9ULD9 1512 aaPredicted RBP44.39■■■■■ 4.7
ABR-215ENST00000571945 EIF4G3O43432 1585 aaKnown RBP44.35■■■■■ 4.69
ABR-215ENST00000571945 BIVM-ERCC5R4GMW8 1640 aa44.32■■■■■ 4.68
ABR-215ENST00000571945 SOGA1O94964 1423 aa44.29■■■■■ 4.68
ABR-215ENST00000571945 WRNQ14191 1432 aaPredicted RBP eCLIP44.29■■■■■ 4.68
ABR-215ENST00000571945 TOP2BQ02880 1626 aa44.28■■■■■ 4.68
ABR-215ENST00000571945 RAD54L2Q9Y4B4 1467 aa44.27■■■■■ 4.68
ABR-215ENST00000571945 WDR97A6NE52 1622 aa44.26■■■■■ 4.68
ABR-215ENST00000571945 SYNJ1O43426 1573 aa44.22■■■■■ 4.67
ABR-215ENST00000571945 DNAJC5Q9H3Z4 198 aa44.2■■■■■ 4.67
ABR-215ENST00000571945 AQRO60306 1485 aaKnown RBP eCLIP44.08■■■■■ 4.65
ABR-215ENST00000571945 ABCA10Q8WWZ4 1543 aa44.04■■■■■ 4.64
ABR-215ENST00000571945 TDRD9Q8NDG6 1382 aaKnown RBP43.99■■■■■ 4.63
ABR-215ENST00000571945 ABCA5Q8WWZ7 1642 aa43.92■■■■■ 4.62
ABR-215ENST00000571945 PBRM1Q86U86 1689 aa43.87■■■■■ 4.61
ABR-215ENST00000571945 GRIN2BQ13224 1484 aa43.85■■■■■ 4.61
ABR-215ENST00000571945 GAPVD1Q14C86 1478 aa43.83■■■■■ 4.61
ABR-215ENST00000571945 CHD1O14646 1710 aa43.79■■■■■ 4.6
ABR-215ENST00000571945 MAGI1Q96QZ7 1491 aaPredicted RBP43.78■■■■■ 4.6
ABR-215ENST00000571945 SNAPC4Q5SXM2 1469 aa43.77■■■■■ 4.6
ABR-215ENST00000571945 OSCARQ8IYS5 282 aa43.72■■■■■ 4.59
ABR-215ENST00000571945 SYNJ2O15056 1496 aa43.58■■■■■ 4.57
ABR-215ENST00000571945 ERICH3Q5RHP9 1530 aa43.55■■■■■ 4.56
ABR-215ENST00000571945 ADAMTS12P58397 1594 aa43.5■■■■■ 4.55
ABR-215ENST00000571945 FBLN2P98095 1184 aa43.46■■■■■ 4.55
ABR-215ENST00000571945 CHMP7Q8WUX9 453 aaPredicted RBP43.41■■■■■ 4.54
ABR-215ENST00000571945 KIF27Q86VH2 1401 aa43.36■■■■■ 4.53
ABR-215ENST00000571945 FHAD1B1AJZ9 1412 aa43.34■■■■■ 4.53
ABR-215ENST00000571945 CLASP1Q7Z460 1538 aa43.3■■■■■ 4.52
ABR-215ENST00000571945 GRIN2AQ12879 1464 aa43.29■■■■■ 4.52
ABR-215ENST00000571945 CUL7Q14999 1698 aa43.21■■■■■ 4.51
ABR-215ENST00000571945 RIMBP3CA6NJZ7 1639 aa43.18■■■■■ 4.5
ABR-215ENST00000571945 RIMBP3BA6NNM3 1639 aa43.18■■■■■ 4.5
ABR-215ENST00000571945 RIMBP3Q9UFD9 1639 aa43.18■■■■■ 4.5
ABR-215ENST00000571945 ARHGEF11O15085 1522 aa43.16■■■■■ 4.5
ABR-215ENST00000571945 IGF1RP08069 1367 aa43.11■■■■■ 4.49
ABR-215ENST00000571945 NUP160Q12769 1436 aa43.11■■■■■ 4.49
ABR-215ENST00000571945 TRIM41Q8WV44 630 aa43.1■■■■■ 4.49
ABR-215ENST00000571945 CEP170Q5SW79 1584 aa43.09■■■■■ 4.49
ABR-215ENST00000571945 RUSC2Q8N2Y8 1516 aa42.87■■■■■ 4.45
ABR-215ENST00000571945 CARMIL1Q5VZK9 1371 aa42.87■■■■■ 4.45
ABR-215ENST00000571945 SHROOM2Q13796 1616 aa42.86■■■■■ 4.45
ABR-215ENST00000571945 ARAP1Q96P48 1450 aa42.8■■■■■ 4.44
ABR-215ENST00000571945 RAPGEF2Q9Y4G8 1499 aa42.68■■■■■ 4.42
ABR-215ENST00000571945 KIAA0586Q9BVV6 1533 aa42.68■■■■■ 4.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms