RNA–Protein interactions for RNA: ENST00000320985.14

ZEB1-201, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZEB1, Length 5,423 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-201ENST00000320985 NISCHQ9Y2I1 1504 aa14.09□□□□□ -0.15
ZEB1-201ENST00000320985 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
ZEB1-201ENST00000320985 ABCC9O60706 1549 aa12.51□□□□□ -0.41
ZEB1-201ENST00000320985 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
ZEB1-201ENST00000320985 NACADO15069 1562 aa12.16□□□□□ -0.46
ZEB1-201ENST00000320985 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.49
ZEB1-201ENST00000320985 SHROOM4Q9ULL8 1493 aa11.92□□□□□ -0.5
ZEB1-201ENST00000320985 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
ZEB1-201ENST00000320985 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
ZEB1-201ENST00000320985 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
ZEB1-201ENST00000320985 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZEB1-201ENST00000320985 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
ZEB1-201ENST00000320985 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
ZEB1-201ENST00000320985 SCRIBQ14160 1630 aa11.46□□□□□ -0.58
ZEB1-201ENST00000320985 CECR2Q9BXF3 1484 aa11.4□□□□□ -0.58
ZEB1-201ENST00000320985 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
ZEB1-201ENST00000320985 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
ZEB1-201ENST00000320985 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
ZEB1-201ENST00000320985 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
ZEB1-201ENST00000320985 CUX2O14529 1486 aa11.11□□□□□ -0.63
ZEB1-201ENST00000320985 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
ZEB1-201ENST00000320985 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
ZEB1-201ENST00000320985 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-201ENST00000320985 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
ZEB1-201ENST00000320985 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
ZEB1-201ENST00000320985 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
ZEB1-201ENST00000320985 ATAD2BQ9ULI0 1458 aa10.97□□□□□ -0.65
ZEB1-201ENST00000320985 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
ZEB1-201ENST00000320985 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
ZEB1-201ENST00000320985 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
ZEB1-201ENST00000320985 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
ZEB1-201ENST00000320985 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
ZEB1-201ENST00000320985 CADPSQ9ULU8 1353 aa10.75□□□□□ -0.69
ZEB1-201ENST00000320985 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
ZEB1-201ENST00000320985 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
ZEB1-201ENST00000320985 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
ZEB1-201ENST00000320985 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
ZEB1-201ENST00000320985 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
ZEB1-201ENST00000320985 WDR62O43379 1518 aa10.66□□□□□ -0.7
ZEB1-201ENST00000320985 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
ZEB1-201ENST00000320985 KIF21AQ7Z4S6 1674 aa10.62□□□□□ -0.71
ZEB1-201ENST00000320985 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
ZEB1-201ENST00000320985 NESP48681 1621 aa10.61□□□□□ -0.71
ZEB1-201ENST00000320985 CFTRP13569 1480 aa10.59□□□□□ -0.71
ZEB1-201ENST00000320985 WIZO95785 1651 aa10.57□□□□□ -0.72
ZEB1-201ENST00000320985 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
ZEB1-201ENST00000320985 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
ZEB1-201ENST00000320985 WDR97A6NE52 1622 aa10.53□□□□□ -0.72
ZEB1-201ENST00000320985 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
ZEB1-201ENST00000320985 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
ZEB1-201ENST00000320985 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
ZEB1-201ENST00000320985 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
ZEB1-201ENST00000320985 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
ZEB1-201ENST00000320985 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
ZEB1-201ENST00000320985 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
ZEB1-201ENST00000320985 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
ZEB1-201ENST00000320985 SOGA1O94964 1423 aa10.29□□□□□ -0.76
ZEB1-201ENST00000320985 EIF4G3O43432 1585 aaKnown RBP10.28□□□□□ -0.76
ZEB1-201ENST00000320985 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
ZEB1-201ENST00000320985 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
ZEB1-201ENST00000320985 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
ZEB1-201ENST00000320985 FBLN2P98095 1184 aa10.22□□□□□ -0.77
ZEB1-201ENST00000320985 POLA1P09884 1462 aaPredicted RBP10.22□□□□□ -0.77
ZEB1-201ENST00000320985 SYNJ2O15056 1496 aa10.21□□□□□ -0.77
ZEB1-201ENST00000320985 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.77
ZEB1-201ENST00000320985 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.77
ZEB1-201ENST00000320985 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.77
ZEB1-201ENST00000320985 WRNQ14191 1432 aaPredicted RBP eCLIP10.21□□□□□ -0.78
ZEB1-201ENST00000320985 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.78
ZEB1-201ENST00000320985 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
ZEB1-201ENST00000320985 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
ZEB1-201ENST00000320985 CHD1O14646 1710 aa10.18□□□□□ -0.78
ZEB1-201ENST00000320985 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
ZEB1-201ENST00000320985 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
ZEB1-201ENST00000320985 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
ZEB1-201ENST00000320985 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
ZEB1-201ENST00000320985 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
ZEB1-201ENST00000320985 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.79
ZEB1-201ENST00000320985 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
ZEB1-201ENST00000320985 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
ZEB1-201ENST00000320985 SRCAPQ6ZRS2 3230 aa10.12□□□□□ -0.79
ZEB1-201ENST00000320985 FHAD1B1AJZ9 1412 aa10.12□□□□□ -0.79
ZEB1-201ENST00000320985 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
ZEB1-201ENST00000320985 CUX1P39880 1505 aa10.11□□□□□ -0.79
ZEB1-201ENST00000320985 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
ZEB1-201ENST00000320985 CLASP1Q7Z460 1538 aa10.1□□□□□ -0.79
ZEB1-201ENST00000320985 RAD54L2Q9Y4B4 1467 aa10.09□□□□□ -0.79
ZEB1-201ENST00000320985 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
ZEB1-201ENST00000320985 TOP2BQ02880 1626 aa10.09□□□□□ -0.79
ZEB1-201ENST00000320985 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
ZEB1-201ENST00000320985 ABCA5Q8WWZ7 1642 aa10.08□□□□□ -0.8
ZEB1-201ENST00000320985 CYB5RLQ6IPT4 315 aa10.07□□□□□ -0.8
ZEB1-201ENST00000320985 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
ZEB1-201ENST00000320985 GRIN2AQ12879 1464 aa10.05□□□□□ -0.8
ZEB1-201ENST00000320985 CUL7Q14999 1698 aa10.04□□□□□ -0.8
ZEB1-201ENST00000320985 KIF27Q86VH2 1401 aa10.03□□□□□ -0.8
ZEB1-201ENST00000320985 AEBP2Q6ZN18 517 aaPredicted RBP10.03□□□□□ -0.8
ZEB1-201ENST00000320985 ARAP1Q96P48 1450 aa10.03□□□□□ -0.8
ZEB1-201ENST00000320985 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.81
ZEB1-201ENST00000320985 CARMIL2Q6F5E8 1435 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms