RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
ZEB1-208ENST00000542815 CCDC180Q9P1Z9 1646 aa12.16□□□□□ -0.46
ZEB1-208ENST00000542815 ABCC9O60706 1549 aa11.51□□□□□ -0.57
ZEB1-208ENST00000542815 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
ZEB1-208ENST00000542815 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
ZEB1-208ENST00000542815 NACADO15069 1562 aa11.33□□□□□ -0.6
ZEB1-208ENST00000542815 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
ZEB1-208ENST00000542815 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
ZEB1-208ENST00000542815 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
ZEB1-208ENST00000542815 BICRAQ9NZM4 1560 aa11.04□□□□□ -0.64
ZEB1-208ENST00000542815 ZCCHC6Q5VYS8 1495 aaKnown RBP10.95□□□□□ -0.66
ZEB1-208ENST00000542815 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
ZEB1-208ENST00000542815 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
ZEB1-208ENST00000542815 CC2D2AQ9P2K1 1620 aa10.67□□□□□ -0.7
ZEB1-208ENST00000542815 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
ZEB1-208ENST00000542815 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
ZEB1-208ENST00000542815 PABPN1Q86U42 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
ZEB1-208ENST00000542815 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
ZEB1-208ENST00000542815 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
ZEB1-208ENST00000542815 NCAPD3P42695 1498 aa10.37□□□□□ -0.75
ZEB1-208ENST00000542815 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
ZEB1-208ENST00000542815 CUX2O14529 1486 aa10.34□□□□□ -0.75
ZEB1-208ENST00000542815 SMARCA4P51532 1647 aa10.31□□□□□ -0.76
ZEB1-208ENST00000542815 BAZ1AQ9NRL2 1556 aaPredicted RBP10.24□□□□□ -0.77
ZEB1-208ENST00000542815 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
ZEB1-208ENST00000542815 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.77
ZEB1-208ENST00000542815 LAMC3Q9Y6N6 1575 aa10.21□□□□□ -0.77
ZEB1-208ENST00000542815 DCAF8L2P0C7V8 631 aa10.2□□□□□ -0.78
ZEB1-208ENST00000542815 PRDM2Q13029 1718 aa10.14□□□□□ -0.79
ZEB1-208ENST00000542815 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
ZEB1-208ENST00000542815 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
ZEB1-208ENST00000542815 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
ZEB1-208ENST00000542815 WDR62O43379 1518 aa10.04□□□□□ -0.8
ZEB1-208ENST00000542815 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
ZEB1-208ENST00000542815 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
ZEB1-208ENST00000542815 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
ZEB1-208ENST00000542815 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
ZEB1-208ENST00000542815 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
ZEB1-208ENST00000542815 NESP48681 1621 aa9.92□□□□□ -0.82
ZEB1-208ENST00000542815 WIZO95785 1651 aa9.9□□□□□ -0.82
ZEB1-208ENST00000542815 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
ZEB1-208ENST00000542815 CFTRP13569 1480 aa9.88□□□□□ -0.83
ZEB1-208ENST00000542815 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
ZEB1-208ENST00000542815 CEP164Q9UPV0 1460 aa9.8□□□□□ -0.84
ZEB1-208ENST00000542815 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
ZEB1-208ENST00000542815 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
ZEB1-208ENST00000542815 RSF1Q96T23 1441 aaPredicted RBP9.76□□□□□ -0.85
ZEB1-208ENST00000542815 URB2Q14146 1524 aaKnown RBP9.74□□□□□ -0.85
ZEB1-208ENST00000542815 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.85
ZEB1-208ENST00000542815 TARBP1Q13395 1621 aaKnown RBP9.71□□□□□ -0.85
ZEB1-208ENST00000542815 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
ZEB1-208ENST00000542815 EIF4G3O43432 1585 aaKnown RBP9.65□□□□□ -0.87
ZEB1-208ENST00000542815 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
ZEB1-208ENST00000542815 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
ZEB1-208ENST00000542815 RIMBP3BA6NNM3 1639 aa9.63□□□□□ -0.87
ZEB1-208ENST00000542815 RIMBP3Q9UFD9 1639 aa9.63□□□□□ -0.87
ZEB1-208ENST00000542815 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
ZEB1-208ENST00000542815 CHD1O14646 1710 aa9.61□□□□□ -0.87
ZEB1-208ENST00000542815 CLASP1Q7Z460 1538 aa9.59□□□□□ -0.87
ZEB1-208ENST00000542815 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
ZEB1-208ENST00000542815 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
ZEB1-208ENST00000542815 BIVM-ERCC5R4GMW8 1640 aa9.52□□□□□ -0.88
ZEB1-208ENST00000542815 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
ZEB1-208ENST00000542815 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
ZEB1-208ENST00000542815 POLA1P09884 1462 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-208ENST00000542815 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-208ENST00000542815 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
ZEB1-208ENST00000542815 SYNJ1O43426 1573 aa9.47□□□□□ -0.89
ZEB1-208ENST00000542815 CUX1P39880 1505 aa9.45□□□□□ -0.9
ZEB1-208ENST00000542815 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
ZEB1-208ENST00000542815 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
ZEB1-208ENST00000542815 ARAP1Q96P48 1450 aa9.41□□□□□ -0.9
ZEB1-208ENST00000542815 TOP2BQ02880 1626 aa9.41□□□□□ -0.9
ZEB1-208ENST00000542815 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
ZEB1-208ENST00000542815 ADAMTS12P58397 1594 aa9.4□□□□□ -0.9
ZEB1-208ENST00000542815 GRIN2BQ13224 1484 aa9.4□□□□□ -0.9
ZEB1-208ENST00000542815 FGD5Q6ZNL6 1462 aa9.39□□□□□ -0.91
ZEB1-208ENST00000542815 ERICH3Q5RHP9 1530 aa9.37□□□□□ -0.91
ZEB1-208ENST00000542815 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
ZEB1-208ENST00000542815 NUP160Q12769 1436 aa9.34□□□□□ -0.91
ZEB1-208ENST00000542815 SOGA1O94964 1423 aa9.34□□□□□ -0.92
ZEB1-208ENST00000542815 AQRO60306 1485 aaKnown RBP eCLIP9.31□□□□□ -0.92
ZEB1-208ENST00000542815 CEP170Q5SW79 1584 aa9.3□□□□□ -0.92
ZEB1-208ENST00000542815 RAD54L2Q9Y4B4 1467 aa9.3□□□□□ -0.92
ZEB1-208ENST00000542815 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
ZEB1-208ENST00000542815 CUL7Q14999 1698 aa9.29□□□□□ -0.92
ZEB1-208ENST00000542815 KIF13AQ9H1H9 1805 aa9.29□□□□□ -0.92
ZEB1-208ENST00000542815 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
ZEB1-208ENST00000542815 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
ZEB1-208ENST00000542815 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
ZEB1-208ENST00000542815 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
ZEB1-208ENST00000542815 WRNQ14191 1432 aaPredicted RBP eCLIP9.21□□□□□ -0.93
ZEB1-208ENST00000542815 GLI2P10070 1586 aa9.17□□□□□ -0.94
ZEB1-208ENST00000542815 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
ZEB1-208ENST00000542815 ERCC6L2Q5T890 1561 aa9.16□□□□□ -0.94
ZEB1-208ENST00000542815 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
ZEB1-208ENST00000542815 DIP2BQ9P265 1576 aa9.14□□□□□ -0.95
ZEB1-208ENST00000542815 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
ZEB1-208ENST00000542815 UHRF1BP1LA0JNW5 1464 aa9.12□□□□□ -0.95
ZEB1-208ENST00000542815 PPRC1Q5VV67 1664 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms