RNA–Protein interactions for RNA: ENST00000586055.2

PALM-203, Transcript of paralemmin, humanhuman

TSL 4

Gene PALM, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-203ENST00000586055 NISCHQ9Y2I1 1504 aa69.79■■■■■ 8.76
PALM-203ENST00000586055 CCDC180Q9P1Z9 1646 aa62.42■■■■■ 7.58
PALM-203ENST00000586055 ABCC9O60706 1549 aa61.84■■■■■ 7.49
PALM-203ENST00000586055 RB1CC1Q8TDY2 1594 aa59.13■■■■■ 7.06
PALM-203ENST00000586055 NACADO15069 1562 aa58.85■■■■■ 7.01
PALM-203ENST00000586055 DCAF8L2P0C7V8 631 aa58.64■■■■■ 6.98
PALM-203ENST00000586055 MYO15BQ96JP2 1530 aa58.22■■■■■ 6.91
PALM-203ENST00000586055 ZCCHC6Q5VYS8 1495 aaKnown RBP57.98■■■■■ 6.87
PALM-203ENST00000586055 UNC13AQ9UPW8 1703 aa57.85■■■■■ 6.85
PALM-203ENST00000586055 DCAF1Q9Y4B6 1507 aa57.69■■■■■ 6.83
PALM-203ENST00000586055 PABPN1Q86U42 306 aaKnown RBP eCLIP57.64■■■■■ 6.82
PALM-203ENST00000586055 DNAJC5BQ9UF47 199 aa57.49■■■■■ 6.79
PALM-203ENST00000586055 BICRAQ9NZM4 1560 aa57.4■■■■■ 6.78
PALM-203ENST00000586055 SCRIBQ14160 1630 aa56.91■■■■■ 6.7
PALM-203ENST00000586055 SHROOM4Q9ULL8 1493 aa56.65■■■■■ 6.66
PALM-203ENST00000586055 EIF4G1Q04637 1599 aaKnown RBP55.93■■■■■ 6.54
PALM-203ENST00000586055 CC2D2AQ9P2K1 1620 aa55.92■■■■■ 6.54
PALM-203ENST00000586055 CECR2Q9BXF3 1484 aa55.64■■■■■ 6.5
PALM-203ENST00000586055 SMARCA4P51532 1647 aa54.35■■■■■ 6.29
PALM-203ENST00000586055 NCAPD3P42695 1498 aa54.31■■■■■ 6.28
PALM-203ENST00000586055 ATAD2BQ9ULI0 1458 aa54.23■■■■■ 6.27
PALM-203ENST00000586055 BAZ1AQ9NRL2 1556 aaPredicted RBP54.15■■■■■ 6.26
PALM-203ENST00000586055 SMARCA2P51531 1590 aa54.12■■■■■ 6.25
PALM-203ENST00000586055 HMGXB3Q12766 1538 aa53.98■■■■■ 6.23
PALM-203ENST00000586055 PEG3Q9GZU2 1588 aa53.81■■■■■ 6.2
PALM-203ENST00000586055 MROH2BQ7Z745 1585 aa53.8■■■■■ 6.2
PALM-203ENST00000586055 BAZ1BQ9UIG0 1483 aaKnown RBP53.74■■■■■ 6.19
PALM-203ENST00000586055 ERCC6Q03468 1493 aa53.34■■■■■ 6.13
PALM-203ENST00000586055 NESP48681 1621 aa53.3■■■■■ 6.12
PALM-203ENST00000586055 WIZO95785 1651 aa53.2■■■■■ 6.11
PALM-203ENST00000586055 CUX2O14529 1486 aa53.06■■■■■ 6.08
PALM-203ENST00000586055 LAMC3Q9Y6N6 1575 aa53.02■■■■■ 6.08
PALM-203ENST00000586055 RSF1Q96T23 1441 aaPredicted RBP52.87■■■■■ 6.05
PALM-203ENST00000586055 CADPSQ9ULU8 1353 aa52.69■■■■■ 6.02
PALM-203ENST00000586055 THOC2Q8NI27 1593 aaKnown RBP52.67■■■■■ 6.02
PALM-203ENST00000586055 KIF21AQ7Z4S6 1674 aa52.67■■■■■ 6.02
PALM-203ENST00000586055 PDS5BQ9NTI5 1447 aa52.66■■■■■ 6.02
PALM-203ENST00000586055 TOP2AP11388 1531 aaKnown RBP52.56■■■■■ 6
PALM-203ENST00000586055 DNAJC5Q9H3Z4 198 aa52.36■■■■■ 5.97
PALM-203ENST00000586055 CFTRP13569 1480 aa52.21■■■■■ 5.95
PALM-203ENST00000586055 MRC2Q9UBG0 1479 aa52.19■■■■■ 5.95
PALM-203ENST00000586055 CEP164Q9UPV0 1460 aa52.11■■■■■ 5.93
PALM-203ENST00000586055 FANCD2Q9BXW9 1451 aa52.1■■■■■ 5.93
PALM-203ENST00000586055 WDR62O43379 1518 aa52.06■■■■■ 5.92
PALM-203ENST00000586055 CCDC88BA6NC98 1476 aa51.94■■■■■ 5.91
PALM-203ENST00000586055 PRDM2Q13029 1718 aa51.81■■■■■ 5.88
PALM-203ENST00000586055 URB2Q14146 1524 aaKnown RBP51.64■■■■■ 5.86
PALM-203ENST00000586055 TOPBP1Q92547 1522 aa51.18■■■■■ 5.78
PALM-203ENST00000586055 ABCC8Q09428 1581 aa51.09■■■■■ 5.77
PALM-203ENST00000586055 DNMBPQ6XZF7 1577 aa51.06■■■■■ 5.76
PALM-203ENST00000586055 IFT140Q96RY7 1462 aa51.03■■■■■ 5.76
PALM-203ENST00000586055 SUPT5HO00267 1087 aaKnown RBP50.94■■■■■ 5.75
PALM-203ENST00000586055 ZNF608Q9ULD9 1512 aaPredicted RBP50.91■■■■■ 5.74
PALM-203ENST00000586055 OSCARQ8IYS5 282 aa50.71■■■■■ 5.71
PALM-203ENST00000586055 TARBP1Q13395 1621 aaKnown RBP50.7■■■■■ 5.71
PALM-203ENST00000586055 POLA1P09884 1462 aaPredicted RBP50.7■■■■■ 5.71
PALM-203ENST00000586055 EIF4G3O43432 1585 aaKnown RBP50.68■■■■■ 5.7
PALM-203ENST00000586055 AQRO60306 1485 aaKnown RBP eCLIP50.52■■■■■ 5.68
PALM-203ENST00000586055 CUX1P39880 1505 aa50.52■■■■■ 5.68
PALM-203ENST00000586055 RAD54L2Q9Y4B4 1467 aa50.5■■■■■ 5.67
PALM-203ENST00000586055 FGD5Q6ZNL6 1462 aa50.46■■■■■ 5.67
PALM-203ENST00000586055 SOGA1O94964 1423 aa50.45■■■■■ 5.67
PALM-203ENST00000586055 TRIM41Q8WV44 630 aa50.32■■■■■ 5.65
PALM-203ENST00000586055 TDRD9Q8NDG6 1382 aaKnown RBP50.29■■■■■ 5.64
PALM-203ENST00000586055 CHD1O14646 1710 aa50.22■■■■■ 5.63
PALM-203ENST00000586055 WDR97A6NE52 1622 aa50.22■■■■■ 5.63
PALM-203ENST00000586055 FBLN2P98095 1184 aa50.05■■■■■ 5.6
PALM-203ENST00000586055 RIMBP3CA6NJZ7 1639 aa50.04■■■■■ 5.6
PALM-203ENST00000586055 RIMBP3BA6NNM3 1639 aa50.04■■■■■ 5.6
PALM-203ENST00000586055 RIMBP3Q9UFD9 1639 aa50.04■■■■■ 5.6
PALM-203ENST00000586055 SNAPC4Q5SXM2 1469 aa50.02■■■■■ 5.6
PALM-203ENST00000586055 GRIN2BQ13224 1484 aa49.96■■■■■ 5.59
PALM-203ENST00000586055 ARHGEF11O15085 1522 aa49.93■■■■■ 5.58
PALM-203ENST00000586055 ABCA10Q8WWZ4 1543 aa49.92■■■■■ 5.58
PALM-203ENST00000586055 MAGI1Q96QZ7 1491 aaPredicted RBP49.91■■■■■ 5.58
PALM-203ENST00000586055 BIVM-ERCC5R4GMW8 1640 aa49.89■■■■■ 5.58
PALM-203ENST00000586055 GAPVD1Q14C86 1478 aa49.87■■■■■ 5.57
PALM-203ENST00000586055 PBRM1Q86U86 1689 aa49.87■■■■■ 5.57
PALM-203ENST00000586055 WRNQ14191 1432 aaPredicted RBP eCLIP49.86■■■■■ 5.57
PALM-203ENST00000586055 TOP2BQ02880 1626 aa49.86■■■■■ 5.57
PALM-203ENST00000586055 SYNJ1O43426 1573 aa49.83■■■■■ 5.57
PALM-203ENST00000586055 ABCA5Q8WWZ7 1642 aa49.82■■■■■ 5.57
PALM-203ENST00000586055 CHMP7Q8WUX9 453 aaPredicted RBP49.77■■■■■ 5.56
PALM-203ENST00000586055 SYNJ2O15056 1496 aa49.73■■■■■ 5.55
PALM-203ENST00000586055 CLASP1Q7Z460 1538 aa49.62■■■■■ 5.53
PALM-203ENST00000586055 CYB5RLQ6IPT4 315 aa49.49■■■■■ 5.51
PALM-203ENST00000586055 ARAP1Q96P48 1450 aa49.47■■■■■ 5.51
PALM-203ENST00000586055 ADAMTS12P58397 1594 aa49.4■■■■■ 5.5
PALM-203ENST00000586055 GRIN2AQ12879 1464 aa49.33■■■■■ 5.49
PALM-203ENST00000586055 ERICH3Q5RHP9 1530 aa49.3■■■■■ 5.48
PALM-203ENST00000586055 FHAD1B1AJZ9 1412 aa49.25■■■■■ 5.47
PALM-203ENST00000586055 NUP160Q12769 1436 aa49.14■■■■■ 5.46
PALM-203ENST00000586055 CEP170Q5SW79 1584 aa49.14■■■■■ 5.46
PALM-203ENST00000586055 ERCC6L2Q5T890 1561 aa48.9■■■■■ 5.42
PALM-203ENST00000586055 SHROOM2Q13796 1616 aa48.88■■■■■ 5.42
PALM-203ENST00000586055 KIF27Q86VH2 1401 aa48.88■■■■■ 5.42
PALM-203ENST00000586055 IGF1RP08069 1367 aa48.78■■■■■ 5.4
PALM-203ENST00000586055 TRHP20396 242 aaPredicted RBP48.76■■■■■ 5.4
PALM-203ENST00000586055 CUL7Q14999 1698 aa48.72■■■■■ 5.39
PALM-203ENST00000586055 RUSC2Q8N2Y8 1516 aa48.68■■■■■ 5.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms