RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
ZEB1-211ENST00000558440 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
ZEB1-211ENST00000558440 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
ZEB1-211ENST00000558440 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
ZEB1-211ENST00000558440 FOXD1Q16676 465 aa21.73■■□□□ 1.07
ZEB1-211ENST00000558440 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
ZEB1-211ENST00000558440 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
ZEB1-211ENST00000558440 MSH5O43196 834 aa20.51■□□□□ 0.87
ZEB1-211ENST00000558440 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
ZEB1-211ENST00000558440 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
ZEB1-211ENST00000558440 ADRA2BP18089 450 aa20.1■□□□□ 0.81
ZEB1-211ENST00000558440 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
ZEB1-211ENST00000558440 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
ZEB1-211ENST00000558440 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
ZEB1-211ENST00000558440 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
ZEB1-211ENST00000558440 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
ZEB1-211ENST00000558440 CNKSR2Q8WXI2 1034 aa17.87■□□□□ 0.45
ZEB1-211ENST00000558440 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
ZEB1-211ENST00000558440 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
ZEB1-211ENST00000558440 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
ZEB1-211ENST00000558440 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
ZEB1-211ENST00000558440 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
ZEB1-211ENST00000558440 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
ZEB1-211ENST00000558440 KCNA4P22459 653 aa17.37■□□□□ 0.37
ZEB1-211ENST00000558440 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
ZEB1-211ENST00000558440 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
ZEB1-211ENST00000558440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
ZEB1-211ENST00000558440 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
ZEB1-211ENST00000558440 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
ZEB1-211ENST00000558440 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
ZEB1-211ENST00000558440 CAPN15O75808 1086 aa16.27■□□□□ 0.2
ZEB1-211ENST00000558440 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
ZEB1-211ENST00000558440 DSG3P32926 999 aa16.21■□□□□ 0.19
ZEB1-211ENST00000558440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
ZEB1-211ENST00000558440 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
ZEB1-211ENST00000558440 POTEHQ6S545 545 aa16.13■□□□□ 0.17
ZEB1-211ENST00000558440 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
ZEB1-211ENST00000558440 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
ZEB1-211ENST00000558440 APLP2Q06481 763 aa16.1■□□□□ 0.17
ZEB1-211ENST00000558440 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
ZEB1-211ENST00000558440 ZBTB22O15209 634 aa15.99■□□□□ 0.15
ZEB1-211ENST00000558440 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
ZEB1-211ENST00000558440 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
ZEB1-211ENST00000558440 ABCB7O75027 752 aa15.83■□□□□ 0.12
ZEB1-211ENST00000558440 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
ZEB1-211ENST00000558440 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
ZEB1-211ENST00000558440 POLA2Q14181 598 aa15.58■□□□□ 0.08
ZEB1-211ENST00000558440 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
ZEB1-211ENST00000558440 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
ZEB1-211ENST00000558440 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
ZEB1-211ENST00000558440 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
ZEB1-211ENST00000558440 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
ZEB1-211ENST00000558440 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
ZEB1-211ENST00000558440 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
ZEB1-211ENST00000558440 FBLN2P98095 1184 aa15.07■□□□□ 0
ZEB1-211ENST00000558440 AKT1S1Q96B36 256 aa15.06■□□□□ 0
ZEB1-211ENST00000558440 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
ZEB1-211ENST00000558440 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
ZEB1-211ENST00000558440 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
ZEB1-211ENST00000558440 SPDYE2BA6NHP3 402 aa14.87□□□□□ -0.03
ZEB1-211ENST00000558440 SPDYE6P0CI01 402 aa14.87□□□□□ -0.03
ZEB1-211ENST00000558440 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
ZEB1-211ENST00000558440 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
ZEB1-211ENST00000558440 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
ZEB1-211ENST00000558440 HAX1O00165 279 aa14.74□□□□□ -0.05
ZEB1-211ENST00000558440 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
ZEB1-211ENST00000558440 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
ZEB1-211ENST00000558440 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
ZEB1-211ENST00000558440 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
ZEB1-211ENST00000558440 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
ZEB1-211ENST00000558440 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
ZEB1-211ENST00000558440 EVX2Q03828 476 aa14.46□□□□□ -0.09
ZEB1-211ENST00000558440 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
ZEB1-211ENST00000558440 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
ZEB1-211ENST00000558440 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
ZEB1-211ENST00000558440 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
ZEB1-211ENST00000558440 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
ZEB1-211ENST00000558440 PROM2Q8N271 834 aa14.19□□□□□ -0.14
ZEB1-211ENST00000558440 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
ZEB1-211ENST00000558440 GABBR2O75899 941 aa14.14□□□□□ -0.15
ZEB1-211ENST00000558440 FKBP8Q14318 412 aa14.07□□□□□ -0.16
ZEB1-211ENST00000558440 LHX8Q68G74 356 aa14.02□□□□□ -0.17
ZEB1-211ENST00000558440 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
ZEB1-211ENST00000558440 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
ZEB1-211ENST00000558440 ABCC9O60706 1549 aa13.92□□□□□ -0.18
ZEB1-211ENST00000558440 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
ZEB1-211ENST00000558440 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
ZEB1-211ENST00000558440 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
ZEB1-211ENST00000558440 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
ZEB1-211ENST00000558440 CLCN6P51797 869 aa13.8□□□□□ -0.2
ZEB1-211ENST00000558440 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
ZEB1-211ENST00000558440 MIER1Q8N108 512 aa13.73□□□□□ -0.21
ZEB1-211ENST00000558440 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
ZEB1-211ENST00000558440 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
ZEB1-211ENST00000558440 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
ZEB1-211ENST00000558440 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
ZEB1-211ENST00000558440 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
ZEB1-211ENST00000558440 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
ZEB1-211ENST00000558440 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
ZEB1-211ENST00000558440 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms