RNA–Protein interactions for RNA: ENST00000544304.5

RAB35-206, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 2,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-206ENST00000544304 NISCHQ9Y2I1 1504 aa44.13■■■■■ 4.65
RAB35-206ENST00000544304 SHROOM4Q9ULL8 1493 aa37.76■■■■□ 3.64
RAB35-206ENST00000544304 CCDC180Q9P1Z9 1646 aa37.36■■■■□ 3.57
RAB35-206ENST00000544304 ZCCHC6Q5VYS8 1495 aaKnown RBP37.34■■■■□ 3.57
RAB35-206ENST00000544304 SUPT5HO00267 1087 aaKnown RBP37.15■■■■□ 3.54
RAB35-206ENST00000544304 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
RAB35-206ENST00000544304 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
RAB35-206ENST00000544304 CHIC1Q5VXU3 224 aa36.18■■■■□ 3.38
RAB35-206ENST00000544304 MYO15BQ96JP2 1530 aa35.97■■■■□ 3.35
RAB35-206ENST00000544304 HRCP23327 699 aa35.31■■■■□ 3.24
RAB35-206ENST00000544304 PCGF6Q9BYE7 350 aa35.22■■■■□ 3.23
RAB35-206ENST00000544304 ABCC9O60706 1549 aa35.21■■■■□ 3.23
RAB35-206ENST00000544304 LOC105371045A0A1W2PR82 267 aa35.12■■■■□ 3.21
RAB35-206ENST00000544304 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
RAB35-206ENST00000544304 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
RAB35-206ENST00000544304 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
RAB35-206ENST00000544304 RB1CC1Q8TDY2 1594 aa34.6■■■■□ 3.13
RAB35-206ENST00000544304 NACADO15069 1562 aa34.59■■■■□ 3.13
RAB35-206ENST00000544304 TRIM26Q12899 539 aaPredicted RBP34.54■■■■□ 3.12
RAB35-206ENST00000544304 PPARGC1BQ86YN6 1023 aaKnown RBP34.51■■■■□ 3.12
RAB35-206ENST00000544304 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
RAB35-206ENST00000544304 FAM9AQ8IZU1 332 aaPredicted RBP34.32■■■■□ 3.08
RAB35-206ENST00000544304 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
RAB35-206ENST00000544304 WIZO95785 1651 aa34.08■■■■□ 3.05
RAB35-206ENST00000544304 EHMT2Q96KQ7 1210 aa34.01■■■■□ 3.03
RAB35-206ENST00000544304 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
RAB35-206ENST00000544304 ZEB1P37275 1124 aaPredicted RBP33.87■■■■□ 3.01
RAB35-206ENST00000544304 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
RAB35-206ENST00000544304 TOP2AP11388 1531 aaKnown RBP33.58■■■□□ 2.97
RAB35-206ENST00000544304 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
RAB35-206ENST00000544304 CCDC88BA6NC98 1476 aa33.49■■■□□ 2.95
RAB35-206ENST00000544304 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
RAB35-206ENST00000544304 SMARCA2P51531 1590 aa33.39■■■□□ 2.94
RAB35-206ENST00000544304 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
RAB35-206ENST00000544304 SOGA1O94964 1423 aa33.17■■■□□ 2.9
RAB35-206ENST00000544304 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
RAB35-206ENST00000544304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.11■■■□□ 2.89
RAB35-206ENST00000544304 WRNQ14191 1432 aaPredicted RBP eCLIP33.1■■■□□ 2.89
RAB35-206ENST00000544304 CEP162Q5TB80 1403 aa33.09■■■□□ 2.89
RAB35-206ENST00000544304 CSRNP3Q8WYN3 585 aa33.07■■■□□ 2.88
RAB35-206ENST00000544304 CCER1Q8TC90 406 aaPredicted RBP33.07■■■□□ 2.88
RAB35-206ENST00000544304 TNIKQ9UKE5 1360 aa33.06■■■□□ 2.88
RAB35-206ENST00000544304 EEA1Q15075 1411 aa33.06■■■□□ 2.88
RAB35-206ENST00000544304 BICRAQ9NZM4 1560 aa33.02■■■□□ 2.88
RAB35-206ENST00000544304 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
RAB35-206ENST00000544304 UBTFP17480 764 aaKnown RBP32.97■■■□□ 2.87
RAB35-206ENST00000544304 TTBK1Q5TCY1 1321 aaPredicted RBP32.95■■■□□ 2.87
RAB35-206ENST00000544304 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
RAB35-206ENST00000544304 GOLGA3Q08378 1498 aa32.82■■■□□ 2.84
RAB35-206ENST00000544304 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
RAB35-206ENST00000544304 SYNJ1O43426 1573 aa32.64■■■□□ 2.82
RAB35-206ENST00000544304 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
RAB35-206ENST00000544304 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
RAB35-206ENST00000544304 SCAF1Q9H7N4 1312 aaKnown RBP32.58■■■□□ 2.81
RAB35-206ENST00000544304 KIF21BO75037 1637 aa32.52■■■□□ 2.8
RAB35-206ENST00000544304 DIEXFQ68CQ4 756 aaKnown RBP32.48■■■□□ 2.79
RAB35-206ENST00000544304 CLIP1P30622 1438 aa32.47■■■□□ 2.79
RAB35-206ENST00000544304 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
RAB35-206ENST00000544304 VPS8Q8N3P4 1428 aa32.34■■■□□ 2.77
RAB35-206ENST00000544304 APLP2Q06481 763 aa32.3■■■□□ 2.76
RAB35-206ENST00000544304 HNRNPUL2Q1KMD3 747 aaKnown RBP32.3■■■□□ 2.76
RAB35-206ENST00000544304 ACIN1Q9UKV3 1341 aaKnown RBP32.28■■■□□ 2.76
RAB35-206ENST00000544304 RANGAP1P46060 587 aaPredicted RBP32.25■■■□□ 2.75
RAB35-206ENST00000544304 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
RAB35-206ENST00000544304 ZNF316A6NFI3 1004 aaPredicted RBP32.21■■■□□ 2.75
RAB35-206ENST00000544304 NEUROD1Q13562 356 aa32.21■■■□□ 2.75
RAB35-206ENST00000544304 CENPBP07199 599 aaPredicted RBP32.12■■■□□ 2.73
RAB35-206ENST00000544304 PELP1Q8IZL8 1130 aaKnown RBP32.11■■■□□ 2.73
RAB35-206ENST00000544304 BIVM-ERCC5R4GMW8 1640 aa32.09■■■□□ 2.73
RAB35-206ENST00000544304 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
RAB35-206ENST00000544304 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
RAB35-206ENST00000544304 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
RAB35-206ENST00000544304 HMGXB3Q12766 1538 aa32■■■□□ 2.71
RAB35-206ENST00000544304 CUX1P39880 1505 aa31.91■■■□□ 2.7
RAB35-206ENST00000544304 GTF3C3Q9Y5Q9 886 aa31.9■■■□□ 2.7
RAB35-206ENST00000544304 KIF27Q86VH2 1401 aa31.89■■■□□ 2.69
RAB35-206ENST00000544304 ARAP1Q96P48 1450 aa31.87■■■□□ 2.69
RAB35-206ENST00000544304 CFTRP13569 1480 aa31.83■■■□□ 2.69
RAB35-206ENST00000544304 KANK4Q5T7N3 995 aaPredicted RBP31.79■■■□□ 2.68
RAB35-206ENST00000544304 MIER1Q8N108 512 aa31.74■■■□□ 2.67
RAB35-206ENST00000544304 CLSPNQ9HAW4 1339 aa31.7■■■□□ 2.67
RAB35-206ENST00000544304 YTHDC1Q96MU7 727 aaKnown RBP31.69■■■□□ 2.66
RAB35-206ENST00000544304 DHX57Q6P158 1386 aaKnown RBP31.65■■■□□ 2.66
RAB35-206ENST00000544304 ARHGAP35Q9NRY4 1499 aa31.6■■■□□ 2.65
RAB35-206ENST00000544304 RRBP1Q9P2E9 1410 aaKnown RBP31.6■■■□□ 2.65
RAB35-206ENST00000544304 IGF1RP08069 1367 aa31.53■■■□□ 2.64
RAB35-206ENST00000544304 CUX2O14529 1486 aa31.52■■■□□ 2.64
RAB35-206ENST00000544304 CCNB3Q8WWL7 1395 aa31.5■■■□□ 2.63
RAB35-206ENST00000544304 CADPSQ9ULU8 1353 aa31.48■■■□□ 2.63
RAB35-206ENST00000544304 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
RAB35-206ENST00000544304 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
RAB35-206ENST00000544304 ITGAEP38570 1179 aa31.39■■■□□ 2.62
RAB35-206ENST00000544304 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
RAB35-206ENST00000544304 MAP3K1Q13233 1512 aa31.26■■■□□ 2.6
RAB35-206ENST00000544304 TIAM1Q13009 1591 aa31.25■■■□□ 2.59
RAB35-206ENST00000544304 RAB3GAP2Q9H2M9 1393 aa31.21■■■□□ 2.59
RAB35-206ENST00000544304 LRRC9Q6ZRR7 1453 aa31.18■■■□□ 2.58
RAB35-206ENST00000544304 FHAD1B1AJZ9 1412 aa31.16■■■□□ 2.58
RAB35-206ENST00000544304 FANCD2Q9BXW9 1451 aa31.15■■■□□ 2.58
RAB35-206ENST00000544304 P3H3Q8IVL6 736 aa31.14■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms