RNA–Protein interactions for RNA: ENST00000382998.8

CTIF-202, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 1 (best) BASIC

Gene CTIF, Length 4,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-202ENST00000382998 MYT1Q01538 1121 aa24.19■■□□□ 1.46
CTIF-202ENST00000382998 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
CTIF-202ENST00000382998 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
CTIF-202ENST00000382998 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.44
CTIF-202ENST00000382998 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
CTIF-202ENST00000382998 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
CTIF-202ENST00000382998 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
CTIF-202ENST00000382998 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
CTIF-202ENST00000382998 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
CTIF-202ENST00000382998 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
CTIF-202ENST00000382998 ABCC9O60706 1549 aa21.41■■□□□ 1.02
CTIF-202ENST00000382998 PRKCSHP14314 528 aaPredicted RBP21.27■■□□□ 1
CTIF-202ENST00000382998 BCL11AQ9H165 835 aa21.21■□□□□ 0.99
CTIF-202ENST00000382998 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
CTIF-202ENST00000382998 HRCP23327 699 aa21.13■□□□□ 0.97
CTIF-202ENST00000382998 PABPN1Q86U42 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
CTIF-202ENST00000382998 EIF5BO60841 1220 aaKnown RBP20.89■□□□□ 0.93
CTIF-202ENST00000382998 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
CTIF-202ENST00000382998 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
CTIF-202ENST00000382998 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
CTIF-202ENST00000382998 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
CTIF-202ENST00000382998 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
CTIF-202ENST00000382998 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
CTIF-202ENST00000382998 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
CTIF-202ENST00000382998 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
CTIF-202ENST00000382998 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
CTIF-202ENST00000382998 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
CTIF-202ENST00000382998 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
CTIF-202ENST00000382998 GLIPR1L2Q4G1C9 344 aa20.33■□□□□ 0.85
CTIF-202ENST00000382998 APLP2Q06481 763 aa20.32■□□□□ 0.84
CTIF-202ENST00000382998 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.84
CTIF-202ENST00000382998 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
CTIF-202ENST00000382998 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
CTIF-202ENST00000382998 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
CTIF-202ENST00000382998 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
CTIF-202ENST00000382998 PODXL2Q9NZ53 605 aa20.08■□□□□ 0.8
CTIF-202ENST00000382998 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
CTIF-202ENST00000382998 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
CTIF-202ENST00000382998 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
CTIF-202ENST00000382998 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
CTIF-202ENST00000382998 NEFLP07196 543 aa19.94■□□□□ 0.78
CTIF-202ENST00000382998 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
CTIF-202ENST00000382998 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
CTIF-202ENST00000382998 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
CTIF-202ENST00000382998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
CTIF-202ENST00000382998 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
CTIF-202ENST00000382998 FBLN2P98095 1184 aa19.79■□□□□ 0.76
CTIF-202ENST00000382998 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
CTIF-202ENST00000382998 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
CTIF-202ENST00000382998 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
CTIF-202ENST00000382998 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.74
CTIF-202ENST00000382998 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
CTIF-202ENST00000382998 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
CTIF-202ENST00000382998 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
CTIF-202ENST00000382998 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
CTIF-202ENST00000382998 NACADO15069 1562 aa19.55■□□□□ 0.72
CTIF-202ENST00000382998 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
CTIF-202ENST00000382998 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
CTIF-202ENST00000382998 A0A0U1RQG5 324 aaPredicted RBP19.49■□□□□ 0.71
CTIF-202ENST00000382998 RTN4Q9NQC3 1192 aaKnown RBP19.48■□□□□ 0.71
CTIF-202ENST00000382998 BCANQ96GW7 911 aa19.38■□□□□ 0.69
CTIF-202ENST00000382998 UBE2Q2Q8WVN8 375 aa19.34■□□□□ 0.69
CTIF-202ENST00000382998 ITGAEP38570 1179 aa19.33■□□□□ 0.68
CTIF-202ENST00000382998 ZNF316A6NFI3 1004 aaPredicted RBP19.3■□□□□ 0.68
CTIF-202ENST00000382998 PDE4CQ08493 712 aa19.29■□□□□ 0.68
CTIF-202ENST00000382998 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
CTIF-202ENST00000382998 ERICH6BQ5W0A0 696 aa19.27■□□□□ 0.67
CTIF-202ENST00000382998 DEKP35659 375 aaKnown RBP19.25■□□□□ 0.67
CTIF-202ENST00000382998 VSIG10Q8N0Z9 540 aa19.25■□□□□ 0.67
CTIF-202ENST00000382998 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
CTIF-202ENST00000382998 NBR1Q14596 966 aa19.24■□□□□ 0.67
CTIF-202ENST00000382998 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
CTIF-202ENST00000382998 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
CTIF-202ENST00000382998 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
CTIF-202ENST00000382998 SALL2Q9Y467 1007 aaPredicted RBP19.12■□□□□ 0.65
CTIF-202ENST00000382998 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
CTIF-202ENST00000382998 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
CTIF-202ENST00000382998 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
CTIF-202ENST00000382998 PDIA4P13667 645 aaKnown RBP19.06■□□□□ 0.64
CTIF-202ENST00000382998 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
CTIF-202ENST00000382998 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
CTIF-202ENST00000382998 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.63
CTIF-202ENST00000382998 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
CTIF-202ENST00000382998 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
CTIF-202ENST00000382998 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
CTIF-202ENST00000382998 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
CTIF-202ENST00000382998 HAP1P54257 671 aaPredicted RBP18.9■□□□□ 0.62
CTIF-202ENST00000382998 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
CTIF-202ENST00000382998 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
CTIF-202ENST00000382998 NCLP19338 710 aaKnown RBP18.85■□□□□ 0.61
CTIF-202ENST00000382998 ANP32AP39687 249 aaKnown RBP18.85■□□□□ 0.61
CTIF-202ENST00000382998 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
CTIF-202ENST00000382998 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
CTIF-202ENST00000382998 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
CTIF-202ENST00000382998 ZNF777Q9ULD5 760 aaPredicted RBP18.81■□□□□ 0.6
CTIF-202ENST00000382998 TSHZ2Q9NRE2 1034 aa18.8■□□□□ 0.6
CTIF-202ENST00000382998 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
CTIF-202ENST00000382998 FKBP8Q14318 412 aa18.76■□□□□ 0.59
CTIF-202ENST00000382998 NEFMP07197 916 aa18.75■□□□□ 0.59
CTIF-202ENST00000382998 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms