RNA–Protein interactions for RNA: ENST00000412128.1

PTMA-206, Transcript of prothymosin alpha, humanhuman

TSL 3

Gene PTMA, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-206ENST00000412128 NISCHQ9Y2I1 1504 aa60.88■■■■■ 7.34
PTMA-206ENST00000412128 CCDC180Q9P1Z9 1646 aa54.37■■■■■ 6.29
PTMA-206ENST00000412128 ABCC9O60706 1549 aa53.86■■■■■ 6.21
PTMA-206ENST00000412128 RB1CC1Q8TDY2 1594 aa51.52■■■■■ 5.84
PTMA-206ENST00000412128 NACADO15069 1562 aa51.32■■■■■ 5.81
PTMA-206ENST00000412128 DCAF8L2P0C7V8 631 aa51.11■■■■■ 5.77
PTMA-206ENST00000412128 MYO15BQ96JP2 1530 aa50.85■■■■■ 5.73
PTMA-206ENST00000412128 ZCCHC6Q5VYS8 1495 aaKnown RBP50.55■■■■■ 5.68
PTMA-206ENST00000412128 DCAF1Q9Y4B6 1507 aa50.37■■■■■ 5.65
PTMA-206ENST00000412128 UNC13AQ9UPW8 1703 aa50.29■■■■■ 5.64
PTMA-206ENST00000412128 PABPN1Q86U42 306 aaKnown RBP eCLIP50.25■■■■■ 5.63
PTMA-206ENST00000412128 DNAJC5BQ9UF47 199 aa50.15■■■■■ 5.62
PTMA-206ENST00000412128 BICRAQ9NZM4 1560 aa50.01■■■■■ 5.6
PTMA-206ENST00000412128 SCRIBQ14160 1630 aa49.52■■■■■ 5.52
PTMA-206ENST00000412128 SHROOM4Q9ULL8 1493 aa49.44■■■■■ 5.51
PTMA-206ENST00000412128 EIF4G1Q04637 1599 aaKnown RBP48.72■■■■■ 5.39
PTMA-206ENST00000412128 CC2D2AQ9P2K1 1620 aa48.69■■■■■ 5.38
PTMA-206ENST00000412128 CECR2Q9BXF3 1484 aa48.49■■■■■ 5.35
PTMA-206ENST00000412128 NCAPD3P42695 1498 aa47.41■■■■■ 5.18
PTMA-206ENST00000412128 SMARCA4P51532 1647 aa47.34■■■■■ 5.17
PTMA-206ENST00000412128 ATAD2BQ9ULI0 1458 aa47.31■■■■■ 5.16
PTMA-206ENST00000412128 BAZ1AQ9NRL2 1556 aaPredicted RBP47.21■■■■■ 5.15
PTMA-206ENST00000412128 SMARCA2P51531 1590 aa47.18■■■■■ 5.14
PTMA-206ENST00000412128 HMGXB3Q12766 1538 aa47.05■■■■■ 5.12
PTMA-206ENST00000412128 PEG3Q9GZU2 1588 aa46.94■■■■■ 5.11
PTMA-206ENST00000412128 MROH2BQ7Z745 1585 aa46.9■■■■■ 5.1
PTMA-206ENST00000412128 BAZ1BQ9UIG0 1483 aaKnown RBP46.83■■■■■ 5.09
PTMA-206ENST00000412128 ERCC6Q03468 1493 aa46.44■■■■■ 5.03
PTMA-206ENST00000412128 NESP48681 1621 aa46.42■■■■■ 5.02
PTMA-206ENST00000412128 WIZO95785 1651 aa46.32■■■■■ 5.01
PTMA-206ENST00000412128 CUX2O14529 1486 aa46.25■■■■■ 5
PTMA-206ENST00000412128 LAMC3Q9Y6N6 1575 aa46.21■■■■■ 4.99
PTMA-206ENST00000412128 RSF1Q96T23 1441 aaPredicted RBP46.15■■■■■ 4.98
PTMA-206ENST00000412128 CADPSQ9ULU8 1353 aa45.98■■■■■ 4.95
PTMA-206ENST00000412128 PDS5BQ9NTI5 1447 aa45.94■■■■■ 4.95
PTMA-206ENST00000412128 THOC2Q8NI27 1593 aaKnown RBP45.84■■■■■ 4.93
PTMA-206ENST00000412128 TOP2AP11388 1531 aaKnown RBP45.8■■■■■ 4.92
PTMA-206ENST00000412128 KIF21AQ7Z4S6 1674 aa45.79■■■■■ 4.92
PTMA-206ENST00000412128 DNAJC5Q9H3Z4 198 aa45.7■■■■■ 4.91
PTMA-206ENST00000412128 CFTRP13569 1480 aa45.56■■■■■ 4.88
PTMA-206ENST00000412128 MRC2Q9UBG0 1479 aa45.49■■■■■ 4.87
PTMA-206ENST00000412128 FANCD2Q9BXW9 1451 aa45.42■■■■■ 4.86
PTMA-206ENST00000412128 CEP164Q9UPV0 1460 aa45.4■■■■■ 4.86
PTMA-206ENST00000412128 WDR62O43379 1518 aa45.36■■■■■ 4.85
PTMA-206ENST00000412128 CCDC88BA6NC98 1476 aa45.31■■■■■ 4.84
PTMA-206ENST00000412128 PRDM2Q13029 1718 aa45.04■■■■■ 4.8
PTMA-206ENST00000412128 URB2Q14146 1524 aaKnown RBP45.01■■■■■ 4.8
PTMA-206ENST00000412128 TOPBP1Q92547 1522 aa44.61■■■■■ 4.73
PTMA-206ENST00000412128 ABCC8Q09428 1581 aa44.6■■■■■ 4.73
PTMA-206ENST00000412128 IFT140Q96RY7 1462 aa44.51■■■■■ 4.72
PTMA-206ENST00000412128 DNMBPQ6XZF7 1577 aa44.48■■■■■ 4.71
PTMA-206ENST00000412128 SUPT5HO00267 1087 aaKnown RBP44.43■■■■■ 4.7
PTMA-206ENST00000412128 ZNF608Q9ULD9 1512 aaPredicted RBP44.36■■■■■ 4.69
PTMA-206ENST00000412128 OSCARQ8IYS5 282 aa44.26■■■■■ 4.68
PTMA-206ENST00000412128 POLA1P09884 1462 aaPredicted RBP44.2■■■■■ 4.67
PTMA-206ENST00000412128 TARBP1Q13395 1621 aaKnown RBP44.18■■■■■ 4.66
PTMA-206ENST00000412128 EIF4G3O43432 1585 aaKnown RBP44.1■■■■■ 4.65
PTMA-206ENST00000412128 AQRO60306 1485 aaKnown RBP eCLIP44.03■■■■■ 4.646e-22■■■■■ 42
PTMA-206ENST00000412128 SOGA1O94964 1423 aa44.03■■■■■ 4.64
PTMA-206ENST00000412128 CUX1P39880 1505 aa44.03■■■■■ 4.64
PTMA-206ENST00000412128 RAD54L2Q9Y4B4 1467 aa44.01■■■■■ 4.64
PTMA-206ENST00000412128 FGD5Q6ZNL6 1462 aa43.97■■■■■ 4.63
PTMA-206ENST00000412128 TDRD9Q8NDG6 1382 aaKnown RBP43.85■■■■■ 4.61
PTMA-206ENST00000412128 TRIM41Q8WV44 630 aa43.79■■■■■ 4.6
PTMA-206ENST00000412128 WDR97A6NE52 1622 aa43.79■■■■■ 4.6
PTMA-206ENST00000412128 CHD1O14646 1710 aa43.65■■■■■ 4.58
PTMA-206ENST00000412128 FBLN2P98095 1184 aa43.61■■■■■ 4.57
PTMA-206ENST00000412128 GRIN2BQ13224 1484 aa43.57■■■■■ 4.57
PTMA-206ENST00000412128 SNAPC4Q5SXM2 1469 aa43.57■■■■■ 4.57
PTMA-206ENST00000412128 ABCA10Q8WWZ4 1543 aa43.55■■■■■ 4.56
PTMA-206ENST00000412128 RIMBP3CA6NJZ7 1639 aa43.55■■■■■ 4.56
PTMA-206ENST00000412128 RIMBP3BA6NNM3 1639 aa43.55■■■■■ 4.56
PTMA-206ENST00000412128 RIMBP3Q9UFD9 1639 aa43.55■■■■■ 4.56
PTMA-206ENST00000412128 MAGI1Q96QZ7 1491 aaPredicted RBP43.52■■■■■ 4.56
PTMA-206ENST00000412128 WRNQ14191 1432 aaPredicted RBP eCLIP43.49■■■■■ 4.55
PTMA-206ENST00000412128 ARHGEF11O15085 1522 aa43.48■■■■■ 4.55
PTMA-206ENST00000412128 GAPVD1Q14C86 1478 aa43.48■■■■■ 4.55
PTMA-206ENST00000412128 TOP2BQ02880 1626 aa43.46■■■■■ 4.55
PTMA-206ENST00000412128 BIVM-ERCC5R4GMW8 1640 aa43.44■■■■■ 4.55
PTMA-206ENST00000412128 CHMP7Q8WUX9 453 aaPredicted RBP43.42■■■■■ 4.54
PTMA-206ENST00000412128 SYNJ1O43426 1573 aa43.4■■■■■ 4.54
PTMA-206ENST00000412128 ABCA5Q8WWZ7 1642 aa43.39■■■■■ 4.54
PTMA-206ENST00000412128 SYNJ2O15056 1496 aa43.37■■■■■ 4.53
PTMA-206ENST00000412128 PBRM1Q86U86 1689 aa43.34■■■■■ 4.53
PTMA-206ENST00000412128 CLASP1Q7Z460 1538 aa43.24■■■■■ 4.51
PTMA-206ENST00000412128 CYB5RLQ6IPT4 315 aa43.15■■■■■ 4.5
PTMA-206ENST00000412128 ARAP1Q96P48 1450 aa43.1■■■■■ 4.49
PTMA-206ENST00000412128 ADAMTS12P58397 1594 aa43.01■■■■■ 4.48
PTMA-206ENST00000412128 ERICH3Q5RHP9 1530 aa43■■■■■ 4.47
PTMA-206ENST00000412128 GRIN2AQ12879 1464 aa43■■■■■ 4.47
PTMA-206ENST00000412128 FHAD1B1AJZ9 1412 aa42.97■■■■■ 4.47
PTMA-206ENST00000412128 NUP160Q12769 1436 aa42.87■■■■■ 4.45
PTMA-206ENST00000412128 CEP170Q5SW79 1584 aa42.8■■■■■ 4.44
PTMA-206ENST00000412128 KIF27Q86VH2 1401 aa42.64■■■■■ 4.42
PTMA-206ENST00000412128 IGF1RP08069 1367 aa42.63■■■■■ 4.41
PTMA-206ENST00000412128 SHROOM2Q13796 1616 aa42.59■■■■■ 4.41
PTMA-206ENST00000412128 ERCC6L2Q5T890 1561 aa42.57■■■■■ 4.41
PTMA-206ENST00000412128 TRHP20396 242 aaPredicted RBP42.46■■■■■ 4.39
PTMA-206ENST00000412128 JPH4Q96JJ6 628 aa42.45■■■■■ 4.39
PTMA-206ENST00000412128 CUL7Q14999 1698 aa42.44■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms