RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 NISCHQ9Y2I1 1504 aa12.09□□□□□ -0.47
ZEB1-217ENST00000559858 HRCP23327 699 aa11.31□□□□□ -0.6
ZEB1-217ENST00000559858 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
ZEB1-217ENST00000559858 PPARGC1BQ86YN6 1023 aaKnown RBP10.96□□□□□ -0.65
ZEB1-217ENST00000559858 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
ZEB1-217ENST00000559858 MYT1Q01538 1121 aa10.89□□□□□ -0.67
ZEB1-217ENST00000559858 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
ZEB1-217ENST00000559858 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
ZEB1-217ENST00000559858 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
ZEB1-217ENST00000559858 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
ZEB1-217ENST00000559858 SHROOM4Q9ULL8 1493 aa10.73□□□□□ -0.69
ZEB1-217ENST00000559858 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
ZEB1-217ENST00000559858 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
ZEB1-217ENST00000559858 AEBP2Q6ZN18 517 aaPredicted RBP10.64□□□□□ -0.71
ZEB1-217ENST00000559858 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
ZEB1-217ENST00000559858 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
ZEB1-217ENST00000559858 ACIN1Q9UKV3 1341 aaKnown RBP10.47□□□□□ -0.73
ZEB1-217ENST00000559858 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
ZEB1-217ENST00000559858 NEUROD1Q13562 356 aa10.39□□□□□ -0.75
ZEB1-217ENST00000559858 GTF3C3Q9Y5Q9 886 aa10.36□□□□□ -0.75
ZEB1-217ENST00000559858 CENPBP07199 599 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-217ENST00000559858 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
ZEB1-217ENST00000559858 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.77
ZEB1-217ENST00000559858 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
ZEB1-217ENST00000559858 CCER1Q8TC90 406 aaPredicted RBP10.11□□□□□ -0.79
ZEB1-217ENST00000559858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
ZEB1-217ENST00000559858 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
ZEB1-217ENST00000559858 BCL11AQ9H165 835 aa10.02□□□□□ -0.81
ZEB1-217ENST00000559858 ZNF316A6NFI3 1004 aaPredicted RBP9.99□□□□□ -0.81
ZEB1-217ENST00000559858 YTHDC1Q96MU7 727 aaKnown RBP9.98□□□□□ -0.81
ZEB1-217ENST00000559858 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
ZEB1-217ENST00000559858 ANP32EQ9BTT0 268 aa9.97□□□□□ -0.81
ZEB1-217ENST00000559858 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.81
ZEB1-217ENST00000559858 CLSPNQ9HAW4 1339 aa9.94□□□□□ -0.82
ZEB1-217ENST00000559858 MIER1Q8N108 512 aa9.9□□□□□ -0.82
ZEB1-217ENST00000559858 EHMT2Q96KQ7 1210 aa9.86□□□□□ -0.83
ZEB1-217ENST00000559858 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
ZEB1-217ENST00000559858 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.84
ZEB1-217ENST00000559858 CSRNP3Q8WYN3 585 aa9.82□□□□□ -0.84
ZEB1-217ENST00000559858 ABCC9O60706 1549 aa9.82□□□□□ -0.84
ZEB1-217ENST00000559858 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
ZEB1-217ENST00000559858 WRNQ14191 1432 aaPredicted RBP eCLIP9.76□□□□□ -0.85
ZEB1-217ENST00000559858 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
ZEB1-217ENST00000559858 PRKCSHP14314 528 aaPredicted RBP9.7□□□□□ -0.86
ZEB1-217ENST00000559858 CEP162Q5TB80 1403 aa9.62□□□□□ -0.87
ZEB1-217ENST00000559858 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
ZEB1-217ENST00000559858 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
ZEB1-217ENST00000559858 TNIKQ9UKE5 1360 aa9.59□□□□□ -0.87
ZEB1-217ENST00000559858 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
ZEB1-217ENST00000559858 BCANQ96GW7 911 aa9.54□□□□□ -0.88
ZEB1-217ENST00000559858 FKBP8Q14318 412 aa9.54□□□□□ -0.88
ZEB1-217ENST00000559858 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
ZEB1-217ENST00000559858 PHF23Q9BUL5 403 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-217ENST00000559858 NEFLP07196 543 aa9.51□□□□□ -0.89
ZEB1-217ENST00000559858 MSH5O43196 834 aa9.5□□□□□ -0.89
ZEB1-217ENST00000559858 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
ZEB1-217ENST00000559858 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
ZEB1-217ENST00000559858 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
ZEB1-217ENST00000559858 EEA1Q15075 1411 aa9.47□□□□□ -0.89
ZEB1-217ENST00000559858 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
ZEB1-217ENST00000559858 APLP2Q06481 763 aa9.44□□□□□ -0.9
ZEB1-217ENST00000559858 CCDC88BA6NC98 1476 aa9.44□□□□□ -0.9
ZEB1-217ENST00000559858 KCNH8Q96L42 1107 aa9.43□□□□□ -0.9
ZEB1-217ENST00000559858 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
ZEB1-217ENST00000559858 MROH2BQ7Z745 1585 aa9.43□□□□□ -0.9
ZEB1-217ENST00000559858 GOLGA3Q08378 1498 aa9.42□□□□□ -0.9
ZEB1-217ENST00000559858 SOGA1O94964 1423 aa9.42□□□□□ -0.9
ZEB1-217ENST00000559858 DEKP35659 375 aaKnown RBP9.41□□□□□ -0.9
ZEB1-217ENST00000559858 ABCC8Q09428 1581 aa9.41□□□□□ -0.9
ZEB1-217ENST00000559858 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
ZEB1-217ENST00000559858 ITGAEP38570 1179 aa9.41□□□□□ -0.9
ZEB1-217ENST00000559858 WIZO95785 1651 aa9.4□□□□□ -0.9
ZEB1-217ENST00000559858 CDK11AQ9UQ88 783 aaPredicted RBP9.39□□□□□ -0.91
ZEB1-217ENST00000559858 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
ZEB1-217ENST00000559858 ERICH6BQ5W0A0 696 aa9.36□□□□□ -0.91
ZEB1-217ENST00000559858 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
ZEB1-217ENST00000559858 ANO8Q9HCE9 1232 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-217ENST00000559858 CLIP1P30622 1438 aa9.34□□□□□ -0.91
ZEB1-217ENST00000559858 RUSC2Q8N2Y8 1516 aa9.34□□□□□ -0.91
ZEB1-217ENST00000559858 CCER2I3L3R5 266 aa9.33□□□□□ -0.92
ZEB1-217ENST00000559858 CEP164Q9UPV0 1460 aa9.31□□□□□ -0.92
ZEB1-217ENST00000559858 DDX10Q13206 875 aaKnown RBP9.31□□□□□ -0.92
ZEB1-217ENST00000559858 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
ZEB1-217ENST00000559858 KIF21BO75037 1637 aa9.28□□□□□ -0.92
ZEB1-217ENST00000559858 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
ZEB1-217ENST00000559858 ANP32CO43423 234 aa9.27□□□□□ -0.93
ZEB1-217ENST00000559858 NACADO15069 1562 aa9.26□□□□□ -0.93
ZEB1-217ENST00000559858 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-217ENST00000559858 CUX2O14529 1486 aa9.26□□□□□ -0.93
ZEB1-217ENST00000559858 NOP58Q9Y2X3 529 aaKnown RBP9.25□□□□□ -0.93
ZEB1-217ENST00000559858 TOP2AP11388 1531 aaKnown RBP9.25□□□□□ -0.93
ZEB1-217ENST00000559858 BAZ1BQ9UIG0 1483 aaKnown RBP9.25□□□□□ -0.93
ZEB1-217ENST00000559858 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
ZEB1-217ENST00000559858 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
ZEB1-217ENST00000559858 NBR1Q14596 966 aa9.22□□□□□ -0.93
ZEB1-217ENST00000559858 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
ZEB1-217ENST00000559858 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
ZEB1-217ENST00000559858 IRX6P78412 446 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-217ENST00000559858 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-217ENST00000559858 TIMELESSQ9UNS1 1208 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms