Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.161e-9■■■■■ 28.6
XRN2Q9H0D6 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.111e-9■■■■■ 28.6
XRN2Q9H0D6 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.961e-9■■■■■ 28.6
XRN2Q9H0D6 CDC42-205ENST00000498236 816 ntTSL 58.18□□□□□ -1.11e-9■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.044e-6■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-201ENST00000239117 555 ntTSL 1 (best)11.67□□□□□ -0.544e-6■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC11.62□□□□□ -0.554e-6■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-212ENST00000472764 847 ntTSL 59.79□□□□□ -0.844e-6■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.874e-6■■■■■ 28.6
XRN2Q9H0D6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC9□□□□□ -0.974e-6■■■■■ 28.6
XRN2Q9H0D6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.682e-6■■■■■ 28.6
XRN2Q9H0D6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.381e-8■■■■■ 28.6
XRN2Q9H0D6 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)24.44■■□□□ 1.54e-8■■■■■ 28.6
XRN2Q9H0D6 SLC2A4RG-202ENST00000473157 991 ntTSL 321.64■■□□□ 1.051e-16■■■■■ 28.6
XRN2Q9H0D6 USP3-205ENST00000557884 958 ntTSL 316.54■□□□□ 0.241e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-221ENST00000561442 542 ntTSL 516.54■□□□□ 0.241e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.49□□□□□ -0.091e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.431e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-216ENST00000559873 584 ntTSL 511.5□□□□□ -0.571e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-219ENST00000561326 543 ntTSL 411.23□□□□□ -0.611e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-206ENST00000558157 2439 ntTSL 1 (best)11.04□□□□□ -0.641e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-217ENST00000560070 545 ntTSL 49.94□□□□□ -0.821e-6■■■■■ 28.5
XRN2Q9H0D6 USP3-210ENST00000559192 5499 ntTSL 1 (best)6.87□□□□□ -1.311e-6■■■■■ 28.5
XRN2Q9H0D6 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.596e-7■■■■■ 28.5
XRN2Q9H0D6 PPIF-203ENST00000472580 761 ntTSL 520.1■□□□□ 0.811e-8■■■■■ 28.5
XRN2Q9H0D6 PPIF-202ENST00000448165 821 ntTSL 218.58■□□□□ 0.561e-8■■■■■ 28.5
XRN2Q9H0D6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-8■■■■■ 28.5
XRN2Q9H0D6 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)25.2■■□□□ 1.631e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.92■□□□□ 0.781e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-211ENST00000589528 441 ntTSL 218.86■□□□□ 0.611e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.74■□□□□ 0.591e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.66■□□□□ 0.11e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.061e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-204ENST00000527071 680 ntTSL 315.14■□□□□ 0.011e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.011e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -01e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-206ENST00000489451 654 ntTSL 314.36□□□□□ -0.111e-7■■■■■ 28.5
XRN2Q9H0D6 ACTN4-209ENST00000586538 546 ntTSL 513.5□□□□□ -0.251e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-205ENST00000527552 5832 ntTSL 1 (best)12.89□□□□□ -0.351e-7■■■■■ 28.5
XRN2Q9H0D6 MROH1-208ENST00000532255 3905 ntTSL 211.92□□□□□ -0.51e-7■■■■■ 28.5
XRN2Q9H0D6 LARP1-210ENST00000519931 569 ntTSL 48.2□□□□□ -1.15e-15■■■■■ 28.5
XRN2Q9H0D6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.046e-10■■■■■ 28.5
XRN2Q9H0D6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.81□□□□□ -0.042e-6■■■■■ 28.5
XRN2Q9H0D6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.946e-10■■■■■ 28.5
XRN2Q9H0D6 CHD9-217ENST00000565832 2169 ntTSL 1 (best)6.57□□□□□ -1.361e-6■■■■■ 28.4
XRN2Q9H0D6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.61□□□□□ -1.671e-6■■■■■ 28.4
XRN2Q9H0D6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.85□□□□□ -1.951e-6■■■■■ 28.4
XRN2Q9H0D6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.961e-6■■■■■ 28.4
XRN2Q9H0D6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.77■■■□□ 2.522e-7■■■■■ 28.4
XRN2Q9H0D6 VAPA-204ENST00000577901 917 ntTSL 219.48■□□□□ 0.713e-10■■■■■ 28.4
XRN2Q9H0D6 VAPA-209ENST00000585042 567 ntTSL 418.29■□□□□ 0.523e-10■■■■■ 28.4
XRN2Q9H0D6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.29■□□□□ 0.523e-10■■■■■ 28.4
XRN2Q9H0D6 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.233e-10■■■■■ 28.4
XRN2Q9H0D6 RAP1B-215ENST00000535492 509 ntTSL 428.93■■■□□ 2.228e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-218ENST00000538877 550 ntTSL 428.93■■■□□ 2.228e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-233ENST00000545720 552 ntTSL 528.93■■■□□ 2.228e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-217ENST00000538283 591 ntTSL 425.67■■□□□ 1.78e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.23■■□□□ 1.638e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.588e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-213ENST00000501412 1488 ntTSL 224.66■■□□□ 1.548e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-209ENST00000460800 755 ntTSL 323.88■■□□□ 1.418e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.88■■□□□ 1.418e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-214ENST00000534899 606 ntTSL 423.88■■□□□ 1.418e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-206ENST00000425247 855 ntTSL 523.59■■□□□ 1.378e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-222ENST00000540781 571 ntTSL 423.59■■□□□ 1.378e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-227ENST00000542018 633 ntTSL 423.46■■□□□ 1.358e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-219ENST00000538980 587 ntTSL 323.4■■□□□ 1.348e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-223ENST00000541167 561 ntTSL 423.4■■□□□ 1.348e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-212ENST00000489473 561 ntTSL 423.4■■□□□ 1.348e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-205ENST00000422358 468 ntTSL 423.1■■□□□ 1.298e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.1■■□□□ 1.298e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-208ENST00000453560 530 ntTSL 423.1■■□□□ 1.298e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.1■■□□□ 1.298e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.84■■□□□ 1.258e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-232ENST00000545270 640 ntTSL 322.37■■□□□ 1.178e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.37■■□□□ 1.178e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-225ENST00000541386 480 ntTSL 422.37■■□□□ 1.178e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.048e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-210ENST00000463493 781 ntTSL 420.79■□□□□ 0.928e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-211ENST00000485252 312 ntTSL 520.72■□□□□ 0.918e-42■■■■■ 28.4
XRN2Q9H0D6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.97■□□□□ 0.471e-6■■■■■ 28.4
XRN2Q9H0D6 PUF60-205ENST00000524570 1934 ntTSL 217.56■□□□□ 0.41e-7■■■■■ 28.4
XRN2Q9H0D6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.198e-42■■■■■ 28.4
XRN2Q9H0D6 PCSK6-212ENST00000560785 507 ntTSL 415.2■□□□□ 0.021e-6■■■■■ 28.4
XRN2Q9H0D6 PCSK6-205ENST00000558433 543 ntTSL 414.7□□□□□ -0.061e-6■■■■■ 28.4
XRN2Q9H0D6 NFKBIA-206ENST00000556664 381 ntTSL 213.64□□□□□ -0.231e-7■■■■■ 28.4
XRN2Q9H0D6 PCSK6-207ENST00000558951 543 ntTSL 311.57□□□□□ -0.561e-6■■■■■ 28.4
XRN2Q9H0D6 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.6□□□□□ -1.038e-42■■■■■ 28.4
XRN2Q9H0D6 PCSK6-206ENST00000558864 3868 ntTSL 26.27□□□□□ -1.41e-6■■■■■ 28.4
XRN2Q9H0D6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.638e-42■■■■■ 28.4
XRN2Q9H0D6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.71□□□□□ -1.668e-42■■■■■ 28.4
XRN2Q9H0D6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.34■■□□□ 1.817e-7■■■■■ 28.4
XRN2Q9H0D6 VWA1-202ENST00000471398 458 ntTSL 321.68■■□□□ 1.067e-7■■■■■ 28.4
XRN2Q9H0D6 VWA1-204ENST00000495558 819 ntTSL 218.31■□□□□ 0.527e-7■■■■■ 28.4
XRN2Q9H0D6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.417e-7■■■■■ 28.4
XRN2Q9H0D6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.57■■□□□ 1.523e-6■■■■■ 28.4
XRN2Q9H0D6 TRIM11-205ENST00000602308 586 ntTSL 318.59■□□□□ 0.573e-6■■■■■ 28.4
XRN2Q9H0D6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.64■□□□□ 0.413e-6■■■■■ 28.4
XRN2Q9H0D6 TRIM11-206ENST00000602582 682 ntTSL 317.01■□□□□ 0.313e-6■■■■■ 28.4
Retrieved 100 of 21,068 protein–RNA pairs in 172.5 ms