RNA–Protein interactions for RNA: ENST00000239117.3

KCNIP2-201, Transcript of potassium voltage-gated channel interacting protein 2, humanhuman

TSL 1 (best)

Gene KCNIP2, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP2-201ENST00000239117 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
KCNIP2-201ENST00000239117 ABCC9O60706 1549 aa21.82■■□□□ 1.08
KCNIP2-201ENST00000239117 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
KCNIP2-201ENST00000239117 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
KCNIP2-201ENST00000239117 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
KCNIP2-201ENST00000239117 NACADO15069 1562 aa20.37■□□□□ 0.85
KCNIP2-201ENST00000239117 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
KCNIP2-201ENST00000239117 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
KCNIP2-201ENST00000239117 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
KCNIP2-201ENST00000239117 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
KCNIP2-201ENST00000239117 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
KCNIP2-201ENST00000239117 SHROOM4Q9ULL8 1493 aa19.77■□□□□ 0.76
KCNIP2-201ENST00000239117 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
KCNIP2-201ENST00000239117 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
KCNIP2-201ENST00000239117 EIF4G1Q04637 1599 aaKnown RBP19.55■□□□□ 0.72
KCNIP2-201ENST00000239117 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
KCNIP2-201ENST00000239117 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
KCNIP2-201ENST00000239117 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
KCNIP2-201ENST00000239117 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
KCNIP2-201ENST00000239117 CUX2O14529 1486 aa19.03■□□□□ 0.64
KCNIP2-201ENST00000239117 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
KCNIP2-201ENST00000239117 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
KCNIP2-201ENST00000239117 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
KCNIP2-201ENST00000239117 HMGXB3Q12766 1538 aa18.64■□□□□ 0.58
KCNIP2-201ENST00000239117 SMARCA2P51531 1590 aa18.64■□□□□ 0.58
KCNIP2-201ENST00000239117 NESP48681 1621 aa18.59■□□□□ 0.57
KCNIP2-201ENST00000239117 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
KCNIP2-201ENST00000239117 THOC2Q8NI27 1593 aaKnown RBP18.53■□□□□ 0.56
KCNIP2-201ENST00000239117 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
KCNIP2-201ENST00000239117 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
KCNIP2-201ENST00000239117 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
KCNIP2-201ENST00000239117 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
KCNIP2-201ENST00000239117 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
KCNIP2-201ENST00000239117 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
KCNIP2-201ENST00000239117 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
KCNIP2-201ENST00000239117 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
KCNIP2-201ENST00000239117 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
KCNIP2-201ENST00000239117 WDR62O43379 1518 aa18.19■□□□□ 0.5
KCNIP2-201ENST00000239117 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
KCNIP2-201ENST00000239117 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
KCNIP2-201ENST00000239117 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
KCNIP2-201ENST00000239117 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
KCNIP2-201ENST00000239117 WIZO95785 1651 aa17.96■□□□□ 0.47
KCNIP2-201ENST00000239117 CFTRP13569 1480 aa17.9■□□□□ 0.46
KCNIP2-201ENST00000239117 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
KCNIP2-201ENST00000239117 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
KCNIP2-201ENST00000239117 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
KCNIP2-201ENST00000239117 URB2Q14146 1524 aaKnown RBP17.85■□□□□ 0.45
KCNIP2-201ENST00000239117 ARHGEF11O15085 1522 aa17.77■□□□□ 0.44
KCNIP2-201ENST00000239117 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
KCNIP2-201ENST00000239117 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
KCNIP2-201ENST00000239117 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
KCNIP2-201ENST00000239117 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
KCNIP2-201ENST00000239117 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
KCNIP2-201ENST00000239117 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
KCNIP2-201ENST00000239117 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
KCNIP2-201ENST00000239117 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
KCNIP2-201ENST00000239117 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
KCNIP2-201ENST00000239117 ABCC8Q09428 1581 aa17.58■□□□□ 0.41
KCNIP2-201ENST00000239117 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
KCNIP2-201ENST00000239117 CHD1O14646 1710 aa17.55■□□□□ 0.4
KCNIP2-201ENST00000239117 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
KCNIP2-201ENST00000239117 FBLN2P98095 1184 aa17.51■□□□□ 0.39
KCNIP2-201ENST00000239117 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
KCNIP2-201ENST00000239117 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■■□□ 17.4
KCNIP2-201ENST00000239117 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
KCNIP2-201ENST00000239117 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
KCNIP2-201ENST00000239117 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
KCNIP2-201ENST00000239117 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
KCNIP2-201ENST00000239117 WDR97A6NE52 1622 aa17.34■□□□□ 0.37
KCNIP2-201ENST00000239117 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
KCNIP2-201ENST00000239117 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
KCNIP2-201ENST00000239117 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
KCNIP2-201ENST00000239117 SOGA1O94964 1423 aa17.31■□□□□ 0.36
KCNIP2-201ENST00000239117 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
KCNIP2-201ENST00000239117 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
KCNIP2-201ENST00000239117 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
KCNIP2-201ENST00000239117 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
KCNIP2-201ENST00000239117 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
KCNIP2-201ENST00000239117 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
KCNIP2-201ENST00000239117 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
KCNIP2-201ENST00000239117 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
KCNIP2-201ENST00000239117 CUX1P39880 1505 aa17.13■□□□□ 0.33
KCNIP2-201ENST00000239117 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
KCNIP2-201ENST00000239117 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
KCNIP2-201ENST00000239117 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
KCNIP2-201ENST00000239117 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
KCNIP2-201ENST00000239117 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
KCNIP2-201ENST00000239117 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
KCNIP2-201ENST00000239117 NUP160Q12769 1436 aa16.95■□□□□ 0.3
KCNIP2-201ENST00000239117 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
KCNIP2-201ENST00000239117 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
KCNIP2-201ENST00000239117 KIF13AQ9H1H9 1805 aa16.9■□□□□ 0.3
KCNIP2-201ENST00000239117 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
KCNIP2-201ENST00000239117 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
KCNIP2-201ENST00000239117 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
KCNIP2-201ENST00000239117 NPM1P06748 294 aaKnown RBP eCLIP16.81■□□□□ 0.28
KCNIP2-201ENST00000239117 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
KCNIP2-201ENST00000239117 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
KCNIP2-201ENST00000239117 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms