RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
USP12-203ENST00000620323 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
USP12-203ENST00000620323 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
USP12-203ENST00000620323 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
USP12-203ENST00000620323 FOXD1Q16676 465 aa20.3■□□□□ 0.84
USP12-203ENST00000620323 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
USP12-203ENST00000620323 MSH5O43196 834 aa19.03■□□□□ 0.64
USP12-203ENST00000620323 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
USP12-203ENST00000620323 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
USP12-203ENST00000620323 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
USP12-203ENST00000620323 ADRA2BP18089 450 aa18.67■□□□□ 0.58
USP12-203ENST00000620323 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
USP12-203ENST00000620323 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
USP12-203ENST00000620323 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
USP12-203ENST00000620323 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
USP12-203ENST00000620323 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
USP12-203ENST00000620323 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
USP12-203ENST00000620323 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
USP12-203ENST00000620323 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
USP12-203ENST00000620323 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
USP12-203ENST00000620323 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
USP12-203ENST00000620323 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
USP12-203ENST00000620323 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
USP12-203ENST00000620323 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
USP12-203ENST00000620323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP12-203ENST00000620323 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
USP12-203ENST00000620323 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
USP12-203ENST00000620323 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
USP12-203ENST00000620323 CAPN15O75808 1086 aa15.14■□□□□ 0.01
USP12-203ENST00000620323 DSG3P32926 999 aa15.12■□□□□ 0.01
USP12-203ENST00000620323 KCNA4P22459 653 aa14.98□□□□□ -0.01
USP12-203ENST00000620323 POTEHQ6S545 545 aa14.98□□□□□ -0.01
USP12-203ENST00000620323 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
USP12-203ENST00000620323 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
USP12-203ENST00000620323 ABCB7O75027 752 aa14.81□□□□□ -0.04
USP12-203ENST00000620323 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
USP12-203ENST00000620323 APLP2Q06481 763 aa14.67□□□□□ -0.06
USP12-203ENST00000620323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
USP12-203ENST00000620323 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
USP12-203ENST00000620323 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
USP12-203ENST00000620323 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
USP12-203ENST00000620323 POLA2Q14181 598 aa14.34□□□□□ -0.11
USP12-203ENST00000620323 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
USP12-203ENST00000620323 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
USP12-203ENST00000620323 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
USP12-203ENST00000620323 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
USP12-203ENST00000620323 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
USP12-203ENST00000620323 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
USP12-203ENST00000620323 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
USP12-203ENST00000620323 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
USP12-203ENST00000620323 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
USP12-203ENST00000620323 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
USP12-203ENST00000620323 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
USP12-203ENST00000620323 ZBTB22O15209 634 aa13.8□□□□□ -0.2
USP12-203ENST00000620323 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
USP12-203ENST00000620323 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP12-203ENST00000620323 HAX1O00165 279 aa13.68□□□□□ -0.22
USP12-203ENST00000620323 EVX2Q03828 476 aa13.57□□□□□ -0.24
USP12-203ENST00000620323 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
USP12-203ENST00000620323 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
USP12-203ENST00000620323 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
USP12-203ENST00000620323 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
USP12-203ENST00000620323 FBLN2P98095 1184 aa13.48□□□□□ -0.25
USP12-203ENST00000620323 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
USP12-203ENST00000620323 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
USP12-203ENST00000620323 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
USP12-203ENST00000620323 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
USP12-203ENST00000620323 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
USP12-203ENST00000620323 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
USP12-203ENST00000620323 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
USP12-203ENST00000620323 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
USP12-203ENST00000620323 GABBR2O75899 941 aa13.18□□□□□ -0.3
USP12-203ENST00000620323 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP12-203ENST00000620323 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
USP12-203ENST00000620323 LHX8Q68G74 356 aa13.02□□□□□ -0.33
USP12-203ENST00000620323 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
USP12-203ENST00000620323 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
USP12-203ENST00000620323 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
USP12-203ENST00000620323 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
USP12-203ENST00000620323 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
USP12-203ENST00000620323 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
USP12-203ENST00000620323 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
USP12-203ENST00000620323 DCBLD2Q96PD2 775 aa12.71□□□□□ -0.37
USP12-203ENST00000620323 CLCN6P51797 869 aa12.69□□□□□ -0.38
USP12-203ENST00000620323 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
USP12-203ENST00000620323 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
USP12-203ENST00000620323 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
USP12-203ENST00000620323 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
USP12-203ENST00000620323 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
USP12-203ENST00000620323 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
USP12-203ENST00000620323 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
USP12-203ENST00000620323 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
USP12-203ENST00000620323 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
USP12-203ENST00000620323 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
USP12-203ENST00000620323 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
USP12-203ENST00000620323 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP12-203ENST00000620323 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
USP12-203ENST00000620323 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
USP12-203ENST00000620323 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
USP12-203ENST00000620323 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms