RNA–Protein interactions for RNA: ENST00000560785.1

PCSK6-212, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 4

Gene PCSK6, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-212ENST00000560785 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
PCSK6-212ENST00000560785 CCDC180Q9P1Z9 1646 aa28.36■■■□□ 2.13
PCSK6-212ENST00000560785 ABCC9O60706 1549 aa28.32■■■□□ 2.12
PCSK6-212ENST00000560785 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
PCSK6-212ENST00000560785 NACADO15069 1562 aa26.81■■□□□ 1.88
PCSK6-212ENST00000560785 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
PCSK6-212ENST00000560785 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
PCSK6-212ENST00000560785 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
PCSK6-212ENST00000560785 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
PCSK6-212ENST00000560785 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
PCSK6-212ENST00000560785 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
PCSK6-212ENST00000560785 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
PCSK6-212ENST00000560785 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
PCSK6-212ENST00000560785 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
PCSK6-212ENST00000560785 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
PCSK6-212ENST00000560785 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
PCSK6-212ENST00000560785 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
PCSK6-212ENST00000560785 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
PCSK6-212ENST00000560785 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
PCSK6-212ENST00000560785 DNAJC5Q9H3Z4 198 aa24.69■■□□□ 1.54
PCSK6-212ENST00000560785 CUX2O14529 1486 aa24.62■■□□□ 1.53
PCSK6-212ENST00000560785 ATAD2BQ9ULI0 1458 aa24.61■■□□□ 1.53
PCSK6-212ENST00000560785 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
PCSK6-212ENST00000560785 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
PCSK6-212ENST00000560785 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
PCSK6-212ENST00000560785 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
PCSK6-212ENST00000560785 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
PCSK6-212ENST00000560785 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
PCSK6-212ENST00000560785 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
PCSK6-212ENST00000560785 NESP48681 1621 aa24.29■■□□□ 1.48
PCSK6-212ENST00000560785 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
PCSK6-212ENST00000560785 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.47
PCSK6-212ENST00000560785 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
PCSK6-212ENST00000560785 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
PCSK6-212ENST00000560785 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
PCSK6-212ENST00000560785 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
PCSK6-212ENST00000560785 WDR62O43379 1518 aa23.84■■□□□ 1.41
PCSK6-212ENST00000560785 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
PCSK6-212ENST00000560785 WIZO95785 1651 aa23.83■■□□□ 1.41
PCSK6-212ENST00000560785 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
PCSK6-212ENST00000560785 CFTRP13569 1480 aa23.67■■□□□ 1.38
PCSK6-212ENST00000560785 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
PCSK6-212ENST00000560785 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
PCSK6-212ENST00000560785 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
PCSK6-212ENST00000560785 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
PCSK6-212ENST00000560785 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
PCSK6-212ENST00000560785 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
PCSK6-212ENST00000560785 OSCARQ8IYS5 282 aa23.32■■□□□ 1.32
PCSK6-212ENST00000560785 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
PCSK6-212ENST00000560785 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
PCSK6-212ENST00000560785 TOPBP1Q92547 1522 aa23.2■■□□□ 1.3
PCSK6-212ENST00000560785 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
PCSK6-212ENST00000560785 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
PCSK6-212ENST00000560785 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
PCSK6-212ENST00000560785 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
PCSK6-212ENST00000560785 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
PCSK6-212ENST00000560785 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
PCSK6-212ENST00000560785 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
PCSK6-212ENST00000560785 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
PCSK6-212ENST00000560785 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
PCSK6-212ENST00000560785 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
PCSK6-212ENST00000560785 CHD1O14646 1710 aa22.91■■□□□ 1.26
PCSK6-212ENST00000560785 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.264e-7■□□□□ 9.4
PCSK6-212ENST00000560785 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
PCSK6-212ENST00000560785 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
PCSK6-212ENST00000560785 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
PCSK6-212ENST00000560785 SOGA1O94964 1423 aa22.78■■□□□ 1.24
PCSK6-212ENST00000560785 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
PCSK6-212ENST00000560785 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
PCSK6-212ENST00000560785 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
PCSK6-212ENST00000560785 CUX1P39880 1505 aa22.72■■□□□ 1.23
PCSK6-212ENST00000560785 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
PCSK6-212ENST00000560785 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
PCSK6-212ENST00000560785 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
PCSK6-212ENST00000560785 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
PCSK6-212ENST00000560785 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
PCSK6-212ENST00000560785 FBLN2P98095 1184 aa22.65■■□□□ 1.22
PCSK6-212ENST00000560785 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
PCSK6-212ENST00000560785 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
PCSK6-212ENST00000560785 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
PCSK6-212ENST00000560785 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
PCSK6-212ENST00000560785 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
PCSK6-212ENST00000560785 GAPVD1Q14C86 1478 aa22.53■■□□□ 1.2
PCSK6-212ENST00000560785 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
PCSK6-212ENST00000560785 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
PCSK6-212ENST00000560785 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
PCSK6-212ENST00000560785 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
PCSK6-212ENST00000560785 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
PCSK6-212ENST00000560785 NUP160Q12769 1436 aa22.35■■□□□ 1.17
PCSK6-212ENST00000560785 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
PCSK6-212ENST00000560785 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
PCSK6-212ENST00000560785 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
PCSK6-212ENST00000560785 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
PCSK6-212ENST00000560785 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
PCSK6-212ENST00000560785 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
PCSK6-212ENST00000560785 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
PCSK6-212ENST00000560785 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
PCSK6-212ENST00000560785 PRG4Q92954 1404 aaPredicted RBP22.05■■□□□ 1.12
PCSK6-212ENST00000560785 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
PCSK6-212ENST00000560785 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms