RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 NISCHQ9Y2I1 1504 aa48.22■■■■■ 5.31
RAP1B-227ENST00000542018 ABCC9O60706 1549 aa43.85■■■■■ 4.61
RAP1B-227ENST00000542018 CCDC180Q9P1Z9 1646 aa43.42■■■■■ 4.54
RAP1B-227ENST00000542018 DNAJC5BQ9UF47 199 aa41.64■■■■■ 4.26
RAP1B-227ENST00000542018 RB1CC1Q8TDY2 1594 aa41.5■■■■■ 4.23
RAP1B-227ENST00000542018 NACADO15069 1562 aa41.14■■■■■ 4.18
RAP1B-227ENST00000542018 PABPN1Q86U42 306 aaKnown RBP eCLIP40.77■■■■■ 4.12
RAP1B-227ENST00000542018 DCAF8L2P0C7V8 631 aa40.76■■■■■ 4.12
RAP1B-227ENST00000542018 UNC13AQ9UPW8 1703 aa40.7■■■■■ 4.11
RAP1B-227ENST00000542018 MYO15BQ96JP2 1530 aa40.46■■■■■ 4.07
RAP1B-227ENST00000542018 BICRAQ9NZM4 1560 aa40.45■■■■■ 4.07
RAP1B-227ENST00000542018 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.98
RAP1B-227ENST00000542018 DCAF1Q9Y4B6 1507 aa39.79■■■■□ 3.96
RAP1B-227ENST00000542018 SHROOM4Q9ULL8 1493 aa39.72■■■■□ 3.95
RAP1B-227ENST00000542018 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
RAP1B-227ENST00000542018 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
RAP1B-227ENST00000542018 CECR2Q9BXF3 1484 aa39.53■■■■□ 3.92
RAP1B-227ENST00000542018 EIF4G1Q04637 1599 aaKnown RBP39.42■■■■□ 3.9
RAP1B-227ENST00000542018 DNAJC5Q9H3Z4 198 aa38.43■■■■□ 3.74
RAP1B-227ENST00000542018 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
RAP1B-227ENST00000542018 CUX2O14529 1486 aa37.92■■■■□ 3.66
RAP1B-227ENST00000542018 ATAD2BQ9ULI0 1458 aa37.85■■■■□ 3.65
RAP1B-227ENST00000542018 ERCC6Q03468 1493 aa37.8■■■■□ 3.64
RAP1B-227ENST00000542018 SMARCA4P51532 1647 aa37.7■■■■□ 3.63
RAP1B-227ENST00000542018 HMGXB3Q12766 1538 aa37.67■■■■□ 3.62
RAP1B-227ENST00000542018 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
RAP1B-227ENST00000542018 NESP48681 1621 aa37.61■■■■□ 3.61
RAP1B-227ENST00000542018 BAZ1AQ9NRL2 1556 aaPredicted RBP37.41■■■■□ 3.58
RAP1B-227ENST00000542018 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
RAP1B-227ENST00000542018 PEG3Q9GZU2 1588 aa37.36■■■■□ 3.57
RAP1B-227ENST00000542018 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
RAP1B-227ENST00000542018 MROH2BQ7Z745 1585 aa37.19■■■■□ 3.54
RAP1B-227ENST00000542018 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
RAP1B-227ENST00000542018 KIF21AQ7Z4S6 1674 aa37.09■■■■□ 3.53
RAP1B-227ENST00000542018 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
RAP1B-227ENST00000542018 CADPSQ9ULU8 1353 aa36.82■■■■□ 3.49
RAP1B-227ENST00000542018 WIZO95785 1651 aa36.72■■■■□ 3.47
RAP1B-227ENST00000542018 MRC2Q9UBG0 1479 aa36.7■■■■□ 3.47
RAP1B-227ENST00000542018 WDR62O43379 1518 aa36.66■■■■□ 3.46
RAP1B-227ENST00000542018 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
RAP1B-227ENST00000542018 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
RAP1B-227ENST00000542018 FANCD2Q9BXW9 1451 aa36.4■■■■□ 3.42
RAP1B-227ENST00000542018 CFTRP13569 1480 aa36.34■■■■□ 3.41
RAP1B-227ENST00000542018 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
RAP1B-227ENST00000542018 URB2Q14146 1524 aaKnown RBP36.19■■■■□ 3.38
RAP1B-227ENST00000542018 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
RAP1B-227ENST00000542018 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
RAP1B-227ENST00000542018 PRDM2Q13029 1718 aa35.94■■■■□ 3.34
RAP1B-227ENST00000542018 ZNF608Q9ULD9 1512 aaPredicted RBP35.82■■■■□ 3.32
RAP1B-227ENST00000542018 CCDC88BA6NC98 1476 aa35.8■■■■□ 3.32
RAP1B-227ENST00000542018 RIMBP3CA6NJZ7 1639 aa35.76■■■■□ 3.32
RAP1B-227ENST00000542018 RIMBP3BA6NNM3 1639 aa35.76■■■■□ 3.32
RAP1B-227ENST00000542018 RIMBP3Q9UFD9 1639 aa35.76■■■■□ 3.32
RAP1B-227ENST00000542018 IFT140Q96RY7 1462 aa35.74■■■■□ 3.31
RAP1B-227ENST00000542018 TOPBP1Q92547 1522 aa35.69■■■■□ 3.3
RAP1B-227ENST00000542018 ARHGEF11O15085 1522 aa35.58■■■■□ 3.29
RAP1B-227ENST00000542018 EIF4G3O43432 1585 aaKnown RBP35.56■■■■□ 3.28
RAP1B-227ENST00000542018 ABCC8Q09428 1581 aa35.5■■■■□ 3.27
RAP1B-227ENST00000542018 DNMBPQ6XZF7 1577 aa35.5■■■■□ 3.27
RAP1B-227ENST00000542018 TARBP1Q13395 1621 aaKnown RBP35.44■■■■□ 3.26
RAP1B-227ENST00000542018 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.261e-6■■■■□ 26.1
RAP1B-227ENST00000542018 CHD1O14646 1710 aa35.39■■■■□ 3.26
RAP1B-227ENST00000542018 CYB5RLQ6IPT4 315 aa35.31■■■■□ 3.24
RAP1B-227ENST00000542018 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
RAP1B-227ENST00000542018 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
RAP1B-227ENST00000542018 RAD54L2Q9Y4B4 1467 aa35.21■■■■□ 3.23
RAP1B-227ENST00000542018 FBLN2P98095 1184 aa35.16■■■■□ 3.22
RAP1B-227ENST00000542018 TDRD9Q8NDG6 1382 aaKnown RBP35.12■■■■□ 3.21
RAP1B-227ENST00000542018 SOGA1O94964 1423 aa35.09■■■■□ 3.21
RAP1B-227ENST00000542018 SNAPC4Q5SXM2 1469 aa35.02■■■■□ 3.2
RAP1B-227ENST00000542018 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
RAP1B-227ENST00000542018 TRHP20396 242 aaPredicted RBP34.99■■■■□ 3.19
RAP1B-227ENST00000542018 CLASP1Q7Z460 1538 aa34.99■■■■□ 3.19
RAP1B-227ENST00000542018 CUX1P39880 1505 aa34.96■■■■□ 3.19
RAP1B-227ENST00000542018 WDR97A6NE52 1622 aa34.95■■■■□ 3.19
RAP1B-227ENST00000542018 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
RAP1B-227ENST00000542018 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
RAP1B-227ENST00000542018 CHMP7Q8WUX9 453 aaPredicted RBP34.83■■■■□ 3.17
RAP1B-227ENST00000542018 GRIN2BQ13224 1484 aa34.83■■■■□ 3.17
RAP1B-227ENST00000542018 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
RAP1B-227ENST00000542018 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
RAP1B-227ENST00000542018 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
RAP1B-227ENST00000542018 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
RAP1B-227ENST00000542018 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
RAP1B-227ENST00000542018 ERCC6L2Q5T890 1561 aa34.46■■■■□ 3.11
RAP1B-227ENST00000542018 GRIN2AQ12879 1464 aa34.4■■■■□ 3.1
RAP1B-227ENST00000542018 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
RAP1B-227ENST00000542018 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
RAP1B-227ENST00000542018 NUP160Q12769 1436 aa34.33■■■■□ 3.09
RAP1B-227ENST00000542018 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
RAP1B-227ENST00000542018 SHROOM2Q13796 1616 aa34.26■■■■□ 3.07
RAP1B-227ENST00000542018 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.07
RAP1B-227ENST00000542018 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
RAP1B-227ENST00000542018 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
RAP1B-227ENST00000542018 AEBP2Q6ZN18 517 aaPredicted RBP34.21■■■■□ 3.07
RAP1B-227ENST00000542018 FHAD1B1AJZ9 1412 aa34.2■■■■□ 3.06
RAP1B-227ENST00000542018 ERICH3Q5RHP9 1530 aa34.12■■■■□ 3.05
RAP1B-227ENST00000542018 KIF13AQ9H1H9 1805 aa34.04■■■■□ 3.04
RAP1B-227ENST00000542018 PRG4Q92954 1404 aaPredicted RBP34■■■■□ 3.03
RAP1B-227ENST00000542018 JPH4Q96JJ6 628 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms