RNA–Protein interactions for RNA: ENST00000558433.5

PCSK6-205, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 4

Gene PCSK6, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-205ENST00000558433 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
PCSK6-205ENST00000558433 CCDC180Q9P1Z9 1646 aa27.36■■□□□ 1.97
PCSK6-205ENST00000558433 ABCC9O60706 1549 aa26.42■■□□□ 1.82
PCSK6-205ENST00000558433 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
PCSK6-205ENST00000558433 NACADO15069 1562 aa25.62■■□□□ 1.69
PCSK6-205ENST00000558433 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
PCSK6-205ENST00000558433 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
PCSK6-205ENST00000558433 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
PCSK6-205ENST00000558433 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
PCSK6-205ENST00000558433 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
PCSK6-205ENST00000558433 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
PCSK6-205ENST00000558433 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
PCSK6-205ENST00000558433 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
PCSK6-205ENST00000558433 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
PCSK6-205ENST00000558433 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
PCSK6-205ENST00000558433 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
PCSK6-205ENST00000558433 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
PCSK6-205ENST00000558433 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
PCSK6-205ENST00000558433 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
PCSK6-205ENST00000558433 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
PCSK6-205ENST00000558433 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
PCSK6-205ENST00000558433 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
PCSK6-205ENST00000558433 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
PCSK6-205ENST00000558433 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
PCSK6-205ENST00000558433 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
PCSK6-205ENST00000558433 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
PCSK6-205ENST00000558433 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
PCSK6-205ENST00000558433 WIZO95785 1651 aa23.54■■□□□ 1.36
PCSK6-205ENST00000558433 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
PCSK6-205ENST00000558433 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
PCSK6-205ENST00000558433 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
PCSK6-205ENST00000558433 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
PCSK6-205ENST00000558433 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
PCSK6-205ENST00000558433 NESP48681 1621 aa22.95■■□□□ 1.26
PCSK6-205ENST00000558433 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
PCSK6-205ENST00000558433 CFTRP13569 1480 aa22.87■■□□□ 1.25
PCSK6-205ENST00000558433 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
PCSK6-205ENST00000558433 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
PCSK6-205ENST00000558433 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
PCSK6-205ENST00000558433 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
PCSK6-205ENST00000558433 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
PCSK6-205ENST00000558433 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
PCSK6-205ENST00000558433 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
PCSK6-205ENST00000558433 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
PCSK6-205ENST00000558433 WDR62O43379 1518 aa22.48■■□□□ 1.19
PCSK6-205ENST00000558433 CUX2O14529 1486 aa22.44■■□□□ 1.18
PCSK6-205ENST00000558433 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
PCSK6-205ENST00000558433 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
PCSK6-205ENST00000558433 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
PCSK6-205ENST00000558433 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
PCSK6-205ENST00000558433 CUX1P39880 1505 aa22.3■■□□□ 1.16
PCSK6-205ENST00000558433 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
PCSK6-205ENST00000558433 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
PCSK6-205ENST00000558433 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
PCSK6-205ENST00000558433 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
PCSK6-205ENST00000558433 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
PCSK6-205ENST00000558433 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
PCSK6-205ENST00000558433 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
PCSK6-205ENST00000558433 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
PCSK6-205ENST00000558433 SOGA1O94964 1423 aa22.06■■□□□ 1.12
PCSK6-205ENST00000558433 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
PCSK6-205ENST00000558433 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
PCSK6-205ENST00000558433 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
PCSK6-205ENST00000558433 ABCA10Q8WWZ4 1543 aa21.98■■□□□ 1.11
PCSK6-205ENST00000558433 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
PCSK6-205ENST00000558433 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.14e-7■□□□□ 9.4
PCSK6-205ENST00000558433 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
PCSK6-205ENST00000558433 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
PCSK6-205ENST00000558433 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
PCSK6-205ENST00000558433 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
PCSK6-205ENST00000558433 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
PCSK6-205ENST00000558433 GRIN2BQ13224 1484 aa21.8■■□□□ 1.08
PCSK6-205ENST00000558433 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
PCSK6-205ENST00000558433 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
PCSK6-205ENST00000558433 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
PCSK6-205ENST00000558433 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
PCSK6-205ENST00000558433 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
PCSK6-205ENST00000558433 ADAMTS12P58397 1594 aa21.66■■□□□ 1.06
PCSK6-205ENST00000558433 CHD1O14646 1710 aa21.65■■□□□ 1.06
PCSK6-205ENST00000558433 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
PCSK6-205ENST00000558433 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
PCSK6-205ENST00000558433 IGF1RP08069 1367 aa21.61■■□□□ 1.05
PCSK6-205ENST00000558433 CUL7Q14999 1698 aa21.6■■□□□ 1.05
PCSK6-205ENST00000558433 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
PCSK6-205ENST00000558433 EEA1Q15075 1411 aa21.55■■□□□ 1.04
PCSK6-205ENST00000558433 FBLN2P98095 1184 aa21.53■■□□□ 1.04
PCSK6-205ENST00000558433 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
PCSK6-205ENST00000558433 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
PCSK6-205ENST00000558433 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
PCSK6-205ENST00000558433 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
PCSK6-205ENST00000558433 NUP160Q12769 1436 aa21.43■■□□□ 1.02
PCSK6-205ENST00000558433 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
PCSK6-205ENST00000558433 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
PCSK6-205ENST00000558433 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
PCSK6-205ENST00000558433 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
PCSK6-205ENST00000558433 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
PCSK6-205ENST00000558433 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
PCSK6-205ENST00000558433 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
PCSK6-205ENST00000558433 KIF21BO75037 1637 aa21.32■■□□□ 1
PCSK6-205ENST00000558433 KIAA0586Q9BVV6 1533 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms