RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 NISCHQ9Y2I1 1504 aa48.02■■■■■ 5.28
RAP1B-208ENST00000453560 CCDC180Q9P1Z9 1646 aa42.95■■■■■ 4.47
RAP1B-208ENST00000453560 ABCC9O60706 1549 aa42.31■■■■■ 4.36
RAP1B-208ENST00000453560 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
RAP1B-208ENST00000453560 NACADO15069 1562 aa40.42■■■■■ 4.06
RAP1B-208ENST00000453560 DCAF8L2P0C7V8 631 aa40.12■■■■■ 4.01
RAP1B-208ENST00000453560 MYO15BQ96JP2 1530 aa40.07■■■■■ 4.01
RAP1B-208ENST00000453560 ZCCHC6Q5VYS8 1495 aaKnown RBP39.93■■■■□ 3.98
RAP1B-208ENST00000453560 UNC13AQ9UPW8 1703 aa39.76■■■■□ 3.96
RAP1B-208ENST00000453560 DCAF1Q9Y4B6 1507 aa39.75■■■■□ 3.95
RAP1B-208ENST00000453560 PABPN1Q86U42 306 aaKnown RBP eCLIP39.41■■■■□ 3.9
RAP1B-208ENST00000453560 BICRAQ9NZM4 1560 aa39.4■■■■□ 3.9
RAP1B-208ENST00000453560 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
RAP1B-208ENST00000453560 SCRIBQ14160 1630 aa39.09■■■■□ 3.85
RAP1B-208ENST00000453560 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
RAP1B-208ENST00000453560 EIF4G1Q04637 1599 aaKnown RBP38.37■■■■□ 3.73
RAP1B-208ENST00000453560 CC2D2AQ9P2K1 1620 aa38.32■■■■□ 3.73
RAP1B-208ENST00000453560 CECR2Q9BXF3 1484 aa38.08■■■■□ 3.69
RAP1B-208ENST00000453560 SMARCA4P51532 1647 aa37.38■■■■□ 3.57
RAP1B-208ENST00000453560 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
RAP1B-208ENST00000453560 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
RAP1B-208ENST00000453560 ATAD2BQ9ULI0 1458 aa37.24■■■■□ 3.55
RAP1B-208ENST00000453560 SMARCA2P51531 1590 aa37.19■■■■□ 3.54
RAP1B-208ENST00000453560 HMGXB3Q12766 1538 aa37.1■■■■□ 3.53
RAP1B-208ENST00000453560 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
RAP1B-208ENST00000453560 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
RAP1B-208ENST00000453560 BAZ1BQ9UIG0 1483 aaKnown RBP36.9■■■■□ 3.5
RAP1B-208ENST00000453560 WIZO95785 1651 aa36.61■■■■□ 3.45
RAP1B-208ENST00000453560 NESP48681 1621 aa36.52■■■■□ 3.44
RAP1B-208ENST00000453560 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
RAP1B-208ENST00000453560 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
RAP1B-208ENST00000453560 RSF1Q96T23 1441 aaPredicted RBP36.4■■■■□ 3.42
RAP1B-208ENST00000453560 CUX2O14529 1486 aa36.31■■■■□ 3.4
RAP1B-208ENST00000453560 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
RAP1B-208ENST00000453560 KIF21AQ7Z4S6 1674 aa36.15■■■■□ 3.38
RAP1B-208ENST00000453560 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
RAP1B-208ENST00000453560 THOC2Q8NI27 1593 aaKnown RBP36.13■■■■□ 3.37
RAP1B-208ENST00000453560 PDS5BQ9NTI5 1447 aa36.1■■■■□ 3.37
RAP1B-208ENST00000453560 CFTRP13569 1480 aa35.88■■■■□ 3.33
RAP1B-208ENST00000453560 MRC2Q9UBG0 1479 aa35.79■■■■□ 3.32
RAP1B-208ENST00000453560 FANCD2Q9BXW9 1451 aa35.75■■■■□ 3.31
RAP1B-208ENST00000453560 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
RAP1B-208ENST00000453560 WDR62O43379 1518 aa35.73■■■■□ 3.31
RAP1B-208ENST00000453560 CCDC88BA6NC98 1476 aa35.72■■■■□ 3.31
RAP1B-208ENST00000453560 PRDM2Q13029 1718 aa35.69■■■■□ 3.3
RAP1B-208ENST00000453560 DNAJC5Q9H3Z4 198 aa35.62■■■■□ 3.29
RAP1B-208ENST00000453560 URB2Q14146 1524 aaKnown RBP35.45■■■■□ 3.27
RAP1B-208ENST00000453560 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
RAP1B-208ENST00000453560 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
RAP1B-208ENST00000453560 DNMBPQ6XZF7 1577 aa35.09■■■■□ 3.21
RAP1B-208ENST00000453560 SUPT5HO00267 1087 aaKnown RBP35.05■■■■□ 3.2
RAP1B-208ENST00000453560 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
RAP1B-208ENST00000453560 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
RAP1B-208ENST00000453560 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
RAP1B-208ENST00000453560 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
RAP1B-208ENST00000453560 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
RAP1B-208ENST00000453560 CUX1P39880 1505 aa34.74■■■■□ 3.15
RAP1B-208ENST00000453560 FGD5Q6ZNL6 1462 aa34.67■■■■□ 3.14
RAP1B-208ENST00000453560 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
RAP1B-208ENST00000453560 OSCARQ8IYS5 282 aa34.63■■■■□ 3.13
RAP1B-208ENST00000453560 AQRO60306 1485 aaKnown RBP eCLIP34.63■■■■□ 3.131e-6■■■■□ 26.1
RAP1B-208ENST00000453560 SOGA1O94964 1423 aa34.62■■■■□ 3.13
RAP1B-208ENST00000453560 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
RAP1B-208ENST00000453560 TDRD9Q8NDG6 1382 aaKnown RBP34.48■■■■□ 3.11
RAP1B-208ENST00000453560 CHD1O14646 1710 aa34.46■■■■□ 3.11
RAP1B-208ENST00000453560 BIVM-ERCC5R4GMW8 1640 aa34.38■■■■□ 3.09
RAP1B-208ENST00000453560 TOP2BQ02880 1626 aa34.35■■■■□ 3.09
RAP1B-208ENST00000453560 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
RAP1B-208ENST00000453560 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
RAP1B-208ENST00000453560 SYNJ1O43426 1573 aa34.32■■■■□ 3.08
RAP1B-208ENST00000453560 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
RAP1B-208ENST00000453560 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
RAP1B-208ENST00000453560 GRIN2BQ13224 1484 aa34.29■■■■□ 3.08
RAP1B-208ENST00000453560 ABCA5Q8WWZ7 1642 aa34.28■■■■□ 3.08
RAP1B-208ENST00000453560 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
RAP1B-208ENST00000453560 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
RAP1B-208ENST00000453560 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
RAP1B-208ENST00000453560 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
RAP1B-208ENST00000453560 GAPVD1Q14C86 1478 aa34.24■■■■□ 3.07
RAP1B-208ENST00000453560 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
RAP1B-208ENST00000453560 FBLN2P98095 1184 aa34.21■■■■□ 3.07
RAP1B-208ENST00000453560 ARHGEF11O15085 1522 aa34.17■■■■□ 3.06
RAP1B-208ENST00000453560 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
RAP1B-208ENST00000453560 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
RAP1B-208ENST00000453560 CLASP1Q7Z460 1538 aa34.05■■■■□ 3.04
RAP1B-208ENST00000453560 ADAMTS12P58397 1594 aa33.96■■■■□ 3.03
RAP1B-208ENST00000453560 ERICH3Q5RHP9 1530 aa33.92■■■■□ 3.02
RAP1B-208ENST00000453560 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
RAP1B-208ENST00000453560 ARAP1Q96P48 1450 aa33.86■■■■□ 3.01
RAP1B-208ENST00000453560 FHAD1B1AJZ9 1412 aa33.82■■■■□ 3
RAP1B-208ENST00000453560 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
RAP1B-208ENST00000453560 CEP170Q5SW79 1584 aa33.76■■■□□ 2.99
RAP1B-208ENST00000453560 NUP160Q12769 1436 aa33.74■■■□□ 2.99
RAP1B-208ENST00000453560 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
RAP1B-208ENST00000453560 SHROOM2Q13796 1616 aa33.6■■■□□ 2.97
RAP1B-208ENST00000453560 CUL7Q14999 1698 aa33.55■■■□□ 2.96
RAP1B-208ENST00000453560 IGF1RP08069 1367 aa33.54■■■□□ 2.96
RAP1B-208ENST00000453560 ERCC6L2Q5T890 1561 aa33.54■■■□□ 2.96
RAP1B-208ENST00000453560 RUSC2Q8N2Y8 1516 aa33.48■■■□□ 2.95
RAP1B-208ENST00000453560 PRG4Q92954 1404 aaPredicted RBP33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms