RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
RAP1B-201ENST00000250559 NISCHQ9Y2I1 1504 aa8.2□□□□□ -1.1
RAP1B-201ENST00000250559 EHMT2Q96KQ7 1210 aa8.13□□□□□ -1.11
RAP1B-201ENST00000250559 SHROOM4Q9ULL8 1493 aa8.05□□□□□ -1.12
RAP1B-201ENST00000250559 SUPT5HO00267 1087 aaKnown RBP8.04□□□□□ -1.12
RAP1B-201ENST00000250559 TTBK1Q5TCY1 1321 aaPredicted RBP7.88□□□□□ -1.15
RAP1B-201ENST00000250559 RANGAP1P46060 587 aaPredicted RBP7.79□□□□□ -1.16
RAP1B-201ENST00000250559 CHIC1Q5VXU3 224 aa7.72□□□□□ -1.17
RAP1B-201ENST00000250559 PLPPR3Q6T4P5 718 aa7.67□□□□□ -1.18
RAP1B-201ENST00000250559 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
RAP1B-201ENST00000250559 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
RAP1B-201ENST00000250559 FAM9AQ8IZU1 332 aaPredicted RBP7.6□□□□□ -1.19
RAP1B-201ENST00000250559 PABPN1Q86U42 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
RAP1B-201ENST00000250559 SENP3Q9H4L4 574 aaPredicted RBP7.47□□□□□ -1.21
RAP1B-201ENST00000250559 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
RAP1B-201ENST00000250559 FBLN2P98095 1184 aa7.4□□□□□ -1.22
RAP1B-201ENST00000250559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.4□□□□□ -1.22
RAP1B-201ENST00000250559 HNRNPUL2Q1KMD3 747 aaKnown RBP7.4□□□□□ -1.22
RAP1B-201ENST00000250559 TRIM41Q8WV44 630 aa7.39□□□□□ -1.23
RAP1B-201ENST00000250559 PPARGC1BQ86YN6 1023 aaKnown RBP7.37□□□□□ -1.23
RAP1B-201ENST00000250559 APLP2Q06481 763 aa7.34□□□□□ -1.23
RAP1B-201ENST00000250559 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
RAP1B-201ENST00000250559 CCER1Q8TC90 406 aaPredicted RBP7.26□□□□□ -1.25
RAP1B-201ENST00000250559 PLEKHG5O94827 1062 aa7.25□□□□□ -1.25
RAP1B-201ENST00000250559 AEBP2Q6ZN18 517 aaPredicted RBP7.24□□□□□ -1.25
RAP1B-201ENST00000250559 UBTFP17480 764 aaKnown RBP7.22□□□□□ -1.25
RAP1B-201ENST00000250559 ARID3CA6NKF2 412 aa7.22□□□□□ -1.25
RAP1B-201ENST00000250559 ABCC9O60706 1549 aa7.21□□□□□ -1.25
RAP1B-201ENST00000250559 LOC105371045A0A1W2PR82 267 aa7.21□□□□□ -1.25
RAP1B-201ENST00000250559 CNGB1Q14028 1251 aaPredicted RBP7.2□□□□□ -1.26
RAP1B-201ENST00000250559 YTHDC1Q96MU7 727 aaKnown RBP7.18□□□□□ -1.26
RAP1B-201ENST00000250559 BCANQ96GW7 911 aa7.16□□□□□ -1.26
RAP1B-201ENST00000250559 SCAF1Q9H7N4 1312 aaKnown RBP7.12□□□□□ -1.27
RAP1B-201ENST00000250559 SLC4A1APQ9BWU0 796 aaKnown RBP7.12□□□□□ -1.27
RAP1B-201ENST00000250559 ITGAEP38570 1179 aa7.09□□□□□ -1.27
RAP1B-201ENST00000250559 A0A0G2JS52 829 aa7.09□□□□□ -1.27
RAP1B-201ENST00000250559 POLR3GLQ9BT43 218 aa7.07□□□□□ -1.28
RAP1B-201ENST00000250559 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
RAP1B-201ENST00000250559 PELP1Q8IZL8 1130 aaKnown RBP7.06□□□□□ -1.28
RAP1B-201ENST00000250559 ZEB1P37275 1124 aaPredicted RBP7.03□□□□□ -1.28
RAP1B-201ENST00000250559 CENPBP07199 599 aaPredicted RBP7.02□□□□□ -1.29
RAP1B-201ENST00000250559 SLC24A1O60721 1099 aa6.99□□□□□ -1.29
RAP1B-201ENST00000250559 HRCP23327 699 aa6.98□□□□□ -1.29
RAP1B-201ENST00000250559 ERICH6Q7L0X2 663 aa6.94□□□□□ -1.3
RAP1B-201ENST00000250559 ESF1Q9H501 851 aaKnown RBP6.93□□□□□ -1.3
RAP1B-201ENST00000250559 P3H3Q8IVL6 736 aa6.92□□□□□ -1.3
RAP1B-201ENST00000250559 SCRIBQ14160 1630 aa6.91□□□□□ -1.3
RAP1B-201ENST00000250559 ZBTB7CA1YPR0 619 aa6.91□□□□□ -1.3
RAP1B-201ENST00000250559 NPM1P06748 294 aaKnown RBP eCLIP6.91□□□□□ -1.3
RAP1B-201ENST00000250559 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
RAP1B-201ENST00000250559 BCL11AQ9H165 835 aa6.9□□□□□ -1.3
RAP1B-201ENST00000250559 FAM50AQ14320 339 aaKnown RBP6.89□□□□□ -1.31
RAP1B-201ENST00000250559 MYT1Q01538 1121 aa6.88□□□□□ -1.31
RAP1B-201ENST00000250559 PHF23Q9BUL5 403 aaPredicted RBP6.88□□□□□ -1.31
RAP1B-201ENST00000250559 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
RAP1B-201ENST00000250559 MLECQ14165 292 aa6.86□□□□□ -1.31
RAP1B-201ENST00000250559 NEFLP07196 543 aa6.84□□□□□ -1.31
RAP1B-201ENST00000250559 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
RAP1B-201ENST00000250559 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
RAP1B-201ENST00000250559 ZNF777Q9ULD5 760 aaPredicted RBP6.84□□□□□ -1.32
RAP1B-201ENST00000250559 STAG3Q9UJ98 1225 aa6.82□□□□□ -1.32
RAP1B-201ENST00000250559 ZCCHC6Q5VYS8 1495 aaKnown RBP6.82□□□□□ -1.32
RAP1B-201ENST00000250559 KCNH8Q96L42 1107 aa6.81□□□□□ -1.32
RAP1B-201ENST00000250559 C14orf37Q86TY3 774 aa6.8□□□□□ -1.32
RAP1B-201ENST00000250559 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
RAP1B-201ENST00000250559 ZNF326Q5BKZ1 582 aaKnown RBP6.76□□□□□ -1.33
RAP1B-201ENST00000250559 MYO15BQ96JP2 1530 aa6.76□□□□□ -1.33
RAP1B-201ENST00000250559 HAP1P54257 671 aaPredicted RBP6.75□□□□□ -1.33
RAP1B-201ENST00000250559 LMOD2Q6P5Q4 547 aa6.73□□□□□ -1.33
RAP1B-201ENST00000250559 CYB5RLQ6IPT4 315 aa6.72□□□□□ -1.33
RAP1B-201ENST00000250559 GTF3C3Q9Y5Q9 886 aa6.71□□□□□ -1.34
RAP1B-201ENST00000250559 CCDC180Q9P1Z9 1646 aa6.69□□□□□ -1.34
RAP1B-201ENST00000250559 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.68□□□□□ -1.34
RAP1B-201ENST00000250559 ARXQ96QS3 562 aa6.68□□□□□ -1.34
RAP1B-201ENST00000250559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.68□□□□□ -1.34
RAP1B-201ENST00000250559 CHMP7Q8WUX9 453 aaPredicted RBP6.66□□□□□ -1.34
RAP1B-201ENST00000250559 CSRNP3Q8WYN3 585 aa6.66□□□□□ -1.34
RAP1B-201ENST00000250559 KLHL34Q8N239 644 aa6.66□□□□□ -1.34
RAP1B-201ENST00000250559 CCDC9Q9Y3X0 531 aaKnown RBP6.66□□□□□ -1.34
RAP1B-201ENST00000250559 ZNF316A6NFI3 1004 aaPredicted RBP6.62□□□□□ -1.35
RAP1B-201ENST00000250559 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
RAP1B-201ENST00000250559 CHIC2Q9UKJ5 165 aa6.6□□□□□ -1.35
RAP1B-201ENST00000250559 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
RAP1B-201ENST00000250559 CLSPNQ9HAW4 1339 aa6.59□□□□□ -1.35
RAP1B-201ENST00000250559 ANP32CO43423 234 aa6.58□□□□□ -1.36
RAP1B-201ENST00000250559 RSF1Q96T23 1441 aaPredicted RBP6.58□□□□□ -1.36
RAP1B-201ENST00000250559 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
RAP1B-201ENST00000250559 DCAF1Q9Y4B6 1507 aa6.56□□□□□ -1.36
RAP1B-201ENST00000250559 ERCC6Q03468 1493 aa6.56□□□□□ -1.36
RAP1B-201ENST00000250559 SALL2Q9Y467 1007 aaPredicted RBP6.56□□□□□ -1.36
RAP1B-201ENST00000250559 PPP1R15AO75807 674 aaPredicted RBP6.56□□□□□ -1.36
RAP1B-201ENST00000250559 CECR2Q9BXF3 1484 aa6.55□□□□□ -1.36
RAP1B-201ENST00000250559 ACIN1Q9UKV3 1341 aaKnown RBP6.54□□□□□ -1.36
RAP1B-201ENST00000250559 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
RAP1B-201ENST00000250559 SOX12O15370 315 aa6.54□□□□□ -1.36
RAP1B-201ENST00000250559 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
RAP1B-201ENST00000250559 FKBP8Q14318 412 aa6.53□□□□□ -1.36
RAP1B-201ENST00000250559 FAM9BQ8IZU0 186 aa6.53□□□□□ -1.36
RAP1B-201ENST00000250559 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
RAP1B-201ENST00000250559 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms