RNA–Protein interactions for RNA: ENST00000472580.6

PPIF-203, Transcript of peptidylprolyl isomerase F, humanhuman

TSL 5

Gene PPIF, Length 761 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPIF-203ENST00000472580 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
PPIF-203ENST00000472580 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
PPIF-203ENST00000472580 ABCC9O60706 1549 aa36.9■■■■□ 3.5
PPIF-203ENST00000472580 RB1CC1Q8TDY2 1594 aa35.24■■■■□ 3.23
PPIF-203ENST00000472580 DCAF8L2P0C7V8 631 aa35.16■■■■□ 3.22
PPIF-203ENST00000472580 NACADO15069 1562 aa35.14■■■■□ 3.22
PPIF-203ENST00000472580 ZCCHC6Q5VYS8 1495 aaKnown RBP34.98■■■■□ 3.19
PPIF-203ENST00000472580 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
PPIF-203ENST00000472580 UNC13AQ9UPW8 1703 aa34.76■■■■□ 3.16
PPIF-203ENST00000472580 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
PPIF-203ENST00000472580 PABPN1Q86U42 306 aaKnown RBP eCLIP34.47■■■■□ 3.11
PPIF-203ENST00000472580 BICRAQ9NZM4 1560 aa34.43■■■■□ 3.1
PPIF-203ENST00000472580 SCRIBQ14160 1630 aa34.26■■■■□ 3.07
PPIF-203ENST00000472580 DNAJC5BQ9UF47 199 aa34.19■■■■□ 3.06
PPIF-203ENST00000472580 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
PPIF-203ENST00000472580 EIF4G1Q04637 1599 aaKnown RBP33.41■■■□□ 2.94
PPIF-203ENST00000472580 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
PPIF-203ENST00000472580 CECR2Q9BXF3 1484 aa33.08■■■□□ 2.89
PPIF-203ENST00000472580 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
PPIF-203ENST00000472580 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
PPIF-203ENST00000472580 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
PPIF-203ENST00000472580 BAZ1AQ9NRL2 1556 aaPredicted RBP32.5■■■□□ 2.79
PPIF-203ENST00000472580 NCAPD3P42695 1498 aa32.47■■■□□ 2.79
PPIF-203ENST00000472580 SMARCA2P51531 1590 aa32.35■■■□□ 2.77
PPIF-203ENST00000472580 PEG3Q9GZU2 1588 aa32.31■■■□□ 2.76
PPIF-203ENST00000472580 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
PPIF-203ENST00000472580 WIZO95785 1651 aa32.19■■■□□ 2.74
PPIF-203ENST00000472580 BAZ1BQ9UIG0 1483 aaKnown RBP32.18■■■□□ 2.74
PPIF-203ENST00000472580 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
PPIF-203ENST00000472580 NESP48681 1621 aa31.97■■■□□ 2.71
PPIF-203ENST00000472580 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
PPIF-203ENST00000472580 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
PPIF-203ENST00000472580 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
PPIF-203ENST00000472580 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.64
PPIF-203ENST00000472580 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
PPIF-203ENST00000472580 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
PPIF-203ENST00000472580 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
PPIF-203ENST00000472580 CUX2O14529 1486 aa31.33■■■□□ 2.61
PPIF-203ENST00000472580 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
PPIF-203ENST00000472580 CFTRP13569 1480 aa31.31■■■□□ 2.6
PPIF-203ENST00000472580 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
PPIF-203ENST00000472580 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
PPIF-203ENST00000472580 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
PPIF-203ENST00000472580 CEP164Q9UPV0 1460 aa31.11■■■□□ 2.57
PPIF-203ENST00000472580 WDR62O43379 1518 aa31.08■■■□□ 2.57
PPIF-203ENST00000472580 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
PPIF-203ENST00000472580 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
PPIF-203ENST00000472580 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
PPIF-203ENST00000472580 TOPBP1Q92547 1522 aa30.71■■■□□ 2.51
PPIF-203ENST00000472580 DNMBPQ6XZF7 1577 aa30.61■■■□□ 2.49
PPIF-203ENST00000472580 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
PPIF-203ENST00000472580 CUX1P39880 1505 aa30.48■■■□□ 2.47
PPIF-203ENST00000472580 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
PPIF-203ENST00000472580 TARBP1Q13395 1621 aaKnown RBP30.45■■■□□ 2.47
PPIF-203ENST00000472580 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
PPIF-203ENST00000472580 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
PPIF-203ENST00000472580 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.46
PPIF-203ENST00000472580 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
PPIF-203ENST00000472580 EIF4G3O43432 1585 aaKnown RBP30.35■■■□□ 2.45
PPIF-203ENST00000472580 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.447e-9■■■■■ 31.4
PPIF-203ENST00000472580 SOGA1O94964 1423 aa30.24■■■□□ 2.43
PPIF-203ENST00000472580 SYNJ1O43426 1573 aa30.2■■■□□ 2.42
PPIF-203ENST00000472580 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
PPIF-203ENST00000472580 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
PPIF-203ENST00000472580 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
PPIF-203ENST00000472580 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
PPIF-203ENST00000472580 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.42e-6■■■■■ 40.4
PPIF-203ENST00000472580 CHD1O14646 1710 aa30.07■■■□□ 2.4
PPIF-203ENST00000472580 OSCARQ8IYS5 282 aa30■■■□□ 2.39
PPIF-203ENST00000472580 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
PPIF-203ENST00000472580 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
PPIF-203ENST00000472580 PBRM1Q86U86 1689 aa29.96■■■□□ 2.39
PPIF-203ENST00000472580 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
PPIF-203ENST00000472580 GAPVD1Q14C86 1478 aa29.89■■■□□ 2.38
PPIF-203ENST00000472580 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
PPIF-203ENST00000472580 FBLN2P98095 1184 aa29.83■■■□□ 2.37
PPIF-203ENST00000472580 MAGI1Q96QZ7 1491 aaPredicted RBP29.79■■■□□ 2.36
PPIF-203ENST00000472580 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
PPIF-203ENST00000472580 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
PPIF-203ENST00000472580 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
PPIF-203ENST00000472580 SYNJ2O15056 1496 aa29.71■■■□□ 2.35
PPIF-203ENST00000472580 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
PPIF-203ENST00000472580 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
PPIF-203ENST00000472580 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
PPIF-203ENST00000472580 CHMP7Q8WUX9 453 aaPredicted RBP29.65■■■□□ 2.34
PPIF-203ENST00000472580 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
PPIF-203ENST00000472580 ERICH3Q5RHP9 1530 aa29.56■■■□□ 2.32
PPIF-203ENST00000472580 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
PPIF-203ENST00000472580 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
PPIF-203ENST00000472580 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
PPIF-203ENST00000472580 ARAP1Q96P48 1450 aa29.46■■■□□ 2.31
PPIF-203ENST00000472580 NUP160Q12769 1436 aa29.43■■■□□ 2.3
PPIF-203ENST00000472580 IGF1RP08069 1367 aa29.42■■■□□ 2.3
PPIF-203ENST00000472580 ERCC6L2Q5T890 1561 aa29.41■■■□□ 2.3
PPIF-203ENST00000472580 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
PPIF-203ENST00000472580 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
PPIF-203ENST00000472580 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
PPIF-203ENST00000472580 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
PPIF-203ENST00000472580 CUL7Q14999 1698 aa29.28■■■□□ 2.28
PPIF-203ENST00000472580 CARMIL1Q5VZK9 1371 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms