RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 AEBP2Q6ZN18 517 aaPredicted RBP31.22■■■□□ 2.59
RAP1B-224ENST00000541216 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
RAP1B-224ENST00000541216 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
RAP1B-224ENST00000541216 PHF23Q9BUL5 403 aaPredicted RBP26.39■■□□□ 1.82
RAP1B-224ENST00000541216 FOXD1Q16676 465 aa25.04■■□□□ 1.6
RAP1B-224ENST00000541216 POTEDQ86YR6 584 aa24.22■■□□□ 1.47
RAP1B-224ENST00000541216 MSH5O43196 834 aa23.8■■□□□ 1.4
RAP1B-224ENST00000541216 PIAS4Q8N2W9 510 aaPredicted RBP23.29■■□□□ 1.32
RAP1B-224ENST00000541216 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
RAP1B-224ENST00000541216 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
RAP1B-224ENST00000541216 ADRA2BP18089 450 aa22.78■■□□□ 1.24
RAP1B-224ENST00000541216 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
RAP1B-224ENST00000541216 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
RAP1B-224ENST00000541216 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
RAP1B-224ENST00000541216 CACNB1Q02641 598 aaPredicted RBP20.79■□□□□ 0.92
RAP1B-224ENST00000541216 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
RAP1B-224ENST00000541216 RNF39Q9H2S5 420 aa20.17■□□□□ 0.82
RAP1B-224ENST00000541216 HOXD11P31277 338 aaPredicted RBP20.15■□□□□ 0.82
RAP1B-224ENST00000541216 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
RAP1B-224ENST00000541216 C1QBPQ07021 282 aaKnown RBP19.91■□□□□ 0.78
RAP1B-224ENST00000541216 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
RAP1B-224ENST00000541216 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
RAP1B-224ENST00000541216 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
RAP1B-224ENST00000541216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.67
RAP1B-224ENST00000541216 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
RAP1B-224ENST00000541216 POTEHQ6S545 545 aa18.88■□□□□ 0.61
RAP1B-224ENST00000541216 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
RAP1B-224ENST00000541216 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
RAP1B-224ENST00000541216 CAPN15O75808 1086 aa18.67■□□□□ 0.58
RAP1B-224ENST00000541216 DSG3P32926 999 aa18.67■□□□□ 0.58
RAP1B-224ENST00000541216 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
RAP1B-224ENST00000541216 APLP2Q06481 763 aa18.29■□□□□ 0.52
RAP1B-224ENST00000541216 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
RAP1B-224ENST00000541216 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
RAP1B-224ENST00000541216 ABCB7O75027 752 aa18.11■□□□□ 0.49
RAP1B-224ENST00000541216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
RAP1B-224ENST00000541216 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
RAP1B-224ENST00000541216 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
RAP1B-224ENST00000541216 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
RAP1B-224ENST00000541216 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
RAP1B-224ENST00000541216 KCNA4P22459 653 aa17.82■□□□□ 0.44
RAP1B-224ENST00000541216 CHRDL2Q6WN34 429 aa17.73■□□□□ 0.43
RAP1B-224ENST00000541216 POLA2Q14181 598 aa17.56■□□□□ 0.4
RAP1B-224ENST00000541216 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
RAP1B-224ENST00000541216 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
RAP1B-224ENST00000541216 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
RAP1B-224ENST00000541216 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
RAP1B-224ENST00000541216 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
RAP1B-224ENST00000541216 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
RAP1B-224ENST00000541216 HAX1O00165 279 aa17.06■□□□□ 0.32
RAP1B-224ENST00000541216 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
RAP1B-224ENST00000541216 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
RAP1B-224ENST00000541216 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
RAP1B-224ENST00000541216 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
RAP1B-224ENST00000541216 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
RAP1B-224ENST00000541216 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
RAP1B-224ENST00000541216 EVX2Q03828 476 aa16.67■□□□□ 0.26
RAP1B-224ENST00000541216 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
RAP1B-224ENST00000541216 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
RAP1B-224ENST00000541216 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
RAP1B-224ENST00000541216 FBLN2P98095 1184 aa16.54■□□□□ 0.24
RAP1B-224ENST00000541216 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
RAP1B-224ENST00000541216 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
RAP1B-224ENST00000541216 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
RAP1B-224ENST00000541216 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
RAP1B-224ENST00000541216 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
RAP1B-224ENST00000541216 GABBR2O75899 941 aa16.35■□□□□ 0.21
RAP1B-224ENST00000541216 LHX8Q68G74 356 aa16.34■□□□□ 0.21
RAP1B-224ENST00000541216 ZBTB22O15209 634 aa16.31■□□□□ 0.2
RAP1B-224ENST00000541216 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
RAP1B-224ENST00000541216 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
RAP1B-224ENST00000541216 MKRN4PQ13434 485 aaPredicted RBP16.17■□□□□ 0.18
RAP1B-224ENST00000541216 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
RAP1B-224ENST00000541216 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
RAP1B-224ENST00000541216 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
RAP1B-224ENST00000541216 CLCN6P51797 869 aa16.01■□□□□ 0.15
RAP1B-224ENST00000541216 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
RAP1B-224ENST00000541216 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
RAP1B-224ENST00000541216 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
RAP1B-224ENST00000541216 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
RAP1B-224ENST00000541216 PLSCR2Q9NRY7 297 aa15.82■□□□□ 0.12
RAP1B-224ENST00000541216 ZNF579Q8NAF0 562 aaKnown RBP15.69■□□□□ 0.1
RAP1B-224ENST00000541216 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
RAP1B-224ENST00000541216 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
RAP1B-224ENST00000541216 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
RAP1B-224ENST00000541216 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
RAP1B-224ENST00000541216 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
RAP1B-224ENST00000541216 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
RAP1B-224ENST00000541216 POTEMA6NI47 508 aa15.4■□□□□ 0.06
RAP1B-224ENST00000541216 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
RAP1B-224ENST00000541216 POTEGQ6S5H5 508 aa15.33■□□□□ 0.04
RAP1B-224ENST00000541216 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
RAP1B-224ENST00000541216 PHF12Q96QT6 1004 aa15.32■□□□□ 0.04
RAP1B-224ENST00000541216 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
RAP1B-224ENST00000541216 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
RAP1B-224ENST00000541216 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
RAP1B-224ENST00000541216 SLC39A7Q92504 469 aa15.19■□□□□ 0.02
RAP1B-224ENST00000541216 METRNQ9UJH8 293 aa15.19■□□□□ 0.02
RAP1B-224ENST00000541216 C7P10643 843 aa15.18■□□□□ 0.02
RAP1B-224ENST00000541216 ASTLQ6HA08 431 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms