RNA–Protein interactions for RNA: ENST00000558951.5

PCSK6-207, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 3

Gene PCSK6, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-207ENST00000558951 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
PCSK6-207ENST00000558951 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
PCSK6-207ENST00000558951 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
PCSK6-207ENST00000558951 ABCC9O60706 1549 aa21.41■■□□□ 1.02
PCSK6-207ENST00000558951 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
PCSK6-207ENST00000558951 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
PCSK6-207ENST00000558951 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
PCSK6-207ENST00000558951 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
PCSK6-207ENST00000558951 NACADO15069 1562 aa20.18■□□□□ 0.82
PCSK6-207ENST00000558951 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
PCSK6-207ENST00000558951 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCSK6-207ENST00000558951 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
PCSK6-207ENST00000558951 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
PCSK6-207ENST00000558951 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
PCSK6-207ENST00000558951 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
PCSK6-207ENST00000558951 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
PCSK6-207ENST00000558951 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
PCSK6-207ENST00000558951 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
PCSK6-207ENST00000558951 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
PCSK6-207ENST00000558951 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
PCSK6-207ENST00000558951 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
PCSK6-207ENST00000558951 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
PCSK6-207ENST00000558951 FOXD1Q16676 465 aa18.81■□□□□ 0.6
PCSK6-207ENST00000558951 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
PCSK6-207ENST00000558951 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
PCSK6-207ENST00000558951 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
PCSK6-207ENST00000558951 CUX2O14529 1486 aa18.52■□□□□ 0.55
PCSK6-207ENST00000558951 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
PCSK6-207ENST00000558951 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
PCSK6-207ENST00000558951 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
PCSK6-207ENST00000558951 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
PCSK6-207ENST00000558951 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
PCSK6-207ENST00000558951 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
PCSK6-207ENST00000558951 NESP48681 1621 aa18.36■□□□□ 0.53
PCSK6-207ENST00000558951 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
PCSK6-207ENST00000558951 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
PCSK6-207ENST00000558951 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
PCSK6-207ENST00000558951 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
PCSK6-207ENST00000558951 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
PCSK6-207ENST00000558951 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
PCSK6-207ENST00000558951 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
PCSK6-207ENST00000558951 WIZO95785 1651 aa17.99■□□□□ 0.47
PCSK6-207ENST00000558951 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
PCSK6-207ENST00000558951 WDR62O43379 1518 aa17.93■□□□□ 0.46
PCSK6-207ENST00000558951 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
PCSK6-207ENST00000558951 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
PCSK6-207ENST00000558951 CFTRP13569 1480 aa17.87■□□□□ 0.45
PCSK6-207ENST00000558951 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
PCSK6-207ENST00000558951 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
PCSK6-207ENST00000558951 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
PCSK6-207ENST00000558951 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
PCSK6-207ENST00000558951 MSH5O43196 834 aa17.74■□□□□ 0.43
PCSK6-207ENST00000558951 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
PCSK6-207ENST00000558951 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
PCSK6-207ENST00000558951 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
PCSK6-207ENST00000558951 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
PCSK6-207ENST00000558951 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
PCSK6-207ENST00000558951 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
PCSK6-207ENST00000558951 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
PCSK6-207ENST00000558951 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
PCSK6-207ENST00000558951 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
PCSK6-207ENST00000558951 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
PCSK6-207ENST00000558951 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
PCSK6-207ENST00000558951 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
PCSK6-207ENST00000558951 ADRA2BP18089 450 aa17.4■□□□□ 0.38
PCSK6-207ENST00000558951 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
PCSK6-207ENST00000558951 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
PCSK6-207ENST00000558951 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
PCSK6-207ENST00000558951 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
PCSK6-207ENST00000558951 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.374e-7■□□□□ 9.4
PCSK6-207ENST00000558951 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
PCSK6-207ENST00000558951 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
PCSK6-207ENST00000558951 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
PCSK6-207ENST00000558951 FBLN2P98095 1184 aa17.27■□□□□ 0.36
PCSK6-207ENST00000558951 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
PCSK6-207ENST00000558951 SOGA1O94964 1423 aa17.27■□□□□ 0.35
PCSK6-207ENST00000558951 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
PCSK6-207ENST00000558951 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
PCSK6-207ENST00000558951 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
PCSK6-207ENST00000558951 CHD1O14646 1710 aa17.2■□□□□ 0.34
PCSK6-207ENST00000558951 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
PCSK6-207ENST00000558951 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
PCSK6-207ENST00000558951 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
PCSK6-207ENST00000558951 CUX1P39880 1505 aa17.16■□□□□ 0.34
PCSK6-207ENST00000558951 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
PCSK6-207ENST00000558951 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
PCSK6-207ENST00000558951 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
PCSK6-207ENST00000558951 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PCSK6-207ENST00000558951 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
PCSK6-207ENST00000558951 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
PCSK6-207ENST00000558951 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
PCSK6-207ENST00000558951 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
PCSK6-207ENST00000558951 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
PCSK6-207ENST00000558951 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
PCSK6-207ENST00000558951 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
PCSK6-207ENST00000558951 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
PCSK6-207ENST00000558951 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
PCSK6-207ENST00000558951 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
PCSK6-207ENST00000558951 NUP160Q12769 1436 aa16.86■□□□□ 0.29
PCSK6-207ENST00000558951 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms