RNA–Protein interactions for RNA: ENST00000537460.5

RAP1B-216, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAP1B, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-216ENST00000537460 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
RAP1B-216ENST00000537460 ABCC9O60706 1549 aa30.37■■■□□ 2.45
RAP1B-216ENST00000537460 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
RAP1B-216ENST00000537460 AEBP2Q6ZN18 517 aaPredicted RBP29.6■■■□□ 2.33
RAP1B-216ENST00000537460 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
RAP1B-216ENST00000537460 DNAJC5BQ9UF47 199 aa29.06■■■□□ 2.24
RAP1B-216ENST00000537460 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
RAP1B-216ENST00000537460 NACADO15069 1562 aa28.36■■■□□ 2.13
RAP1B-216ENST00000537460 PABPN1Q86U42 306 aaKnown RBP eCLIP28.24■■■□□ 2.11
RAP1B-216ENST00000537460 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
RAP1B-216ENST00000537460 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
RAP1B-216ENST00000537460 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
RAP1B-216ENST00000537460 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
RAP1B-216ENST00000537460 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
RAP1B-216ENST00000537460 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
RAP1B-216ENST00000537460 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
RAP1B-216ENST00000537460 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
RAP1B-216ENST00000537460 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
RAP1B-216ENST00000537460 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
RAP1B-216ENST00000537460 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
RAP1B-216ENST00000537460 DNAJC5Q9H3Z4 198 aa27.11■■□□□ 1.93
RAP1B-216ENST00000537460 CUX2O14529 1486 aa26.4■■□□□ 1.82
RAP1B-216ENST00000537460 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
RAP1B-216ENST00000537460 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
RAP1B-216ENST00000537460 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
RAP1B-216ENST00000537460 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
RAP1B-216ENST00000537460 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
RAP1B-216ENST00000537460 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
RAP1B-216ENST00000537460 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
RAP1B-216ENST00000537460 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
RAP1B-216ENST00000537460 NESP48681 1621 aa25.92■■□□□ 1.74
RAP1B-216ENST00000537460 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
RAP1B-216ENST00000537460 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
RAP1B-216ENST00000537460 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
RAP1B-216ENST00000537460 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
RAP1B-216ENST00000537460 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
RAP1B-216ENST00000537460 WIZO95785 1651 aa25.58■■□□□ 1.69
RAP1B-216ENST00000537460 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
RAP1B-216ENST00000537460 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
RAP1B-216ENST00000537460 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
RAP1B-216ENST00000537460 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
RAP1B-216ENST00000537460 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
RAP1B-216ENST00000537460 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
RAP1B-216ENST00000537460 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
RAP1B-216ENST00000537460 WDR62O43379 1518 aa25.27■■□□□ 1.64
RAP1B-216ENST00000537460 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
RAP1B-216ENST00000537460 CFTRP13569 1480 aa25.19■■□□□ 1.62
RAP1B-216ENST00000537460 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
RAP1B-216ENST00000537460 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
RAP1B-216ENST00000537460 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
RAP1B-216ENST00000537460 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
RAP1B-216ENST00000537460 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
RAP1B-216ENST00000537460 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
RAP1B-216ENST00000537460 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
RAP1B-216ENST00000537460 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
RAP1B-216ENST00000537460 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
RAP1B-216ENST00000537460 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
RAP1B-216ENST00000537460 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
RAP1B-216ENST00000537460 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
RAP1B-216ENST00000537460 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
RAP1B-216ENST00000537460 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
RAP1B-216ENST00000537460 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
RAP1B-216ENST00000537460 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
RAP1B-216ENST00000537460 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
RAP1B-216ENST00000537460 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
RAP1B-216ENST00000537460 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
RAP1B-216ENST00000537460 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
RAP1B-216ENST00000537460 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
RAP1B-216ENST00000537460 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.491e-6■■■■□ 26.1
RAP1B-216ENST00000537460 FBLN2P98095 1184 aa24.38■■□□□ 1.49
RAP1B-216ENST00000537460 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
RAP1B-216ENST00000537460 CHD1O14646 1710 aa24.33■■□□□ 1.49
RAP1B-216ENST00000537460 CUX1P39880 1505 aa24.33■■□□□ 1.49
RAP1B-216ENST00000537460 SOGA1O94964 1423 aa24.3■■□□□ 1.48
RAP1B-216ENST00000537460 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
RAP1B-216ENST00000537460 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
RAP1B-216ENST00000537460 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
RAP1B-216ENST00000537460 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
RAP1B-216ENST00000537460 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
RAP1B-216ENST00000537460 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
RAP1B-216ENST00000537460 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
RAP1B-216ENST00000537460 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
RAP1B-216ENST00000537460 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
RAP1B-216ENST00000537460 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
RAP1B-216ENST00000537460 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
RAP1B-216ENST00000537460 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
RAP1B-216ENST00000537460 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
RAP1B-216ENST00000537460 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
RAP1B-216ENST00000537460 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
RAP1B-216ENST00000537460 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
RAP1B-216ENST00000537460 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
RAP1B-216ENST00000537460 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
RAP1B-216ENST00000537460 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
RAP1B-216ENST00000537460 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
RAP1B-216ENST00000537460 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
RAP1B-216ENST00000537460 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
RAP1B-216ENST00000537460 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
RAP1B-216ENST00000537460 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
RAP1B-216ENST00000537460 NUP160Q12769 1436 aa23.68■■□□□ 1.38
RAP1B-216ENST00000537460 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms