RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 NISCHQ9Y2I1 1504 aa34.33■■■■□ 3.09
CDC42-203ENST00000400259 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.35
CDC42-203ENST00000400259 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
CDC42-203ENST00000400259 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
CDC42-203ENST00000400259 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
CDC42-203ENST00000400259 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
CDC42-203ENST00000400259 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
CDC42-203ENST00000400259 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
CDC42-203ENST00000400259 NACADO15069 1562 aa27.47■■□□□ 1.99
CDC42-203ENST00000400259 ABCC9O60706 1549 aa27.43■■□□□ 1.98
CDC42-203ENST00000400259 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
CDC42-203ENST00000400259 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
CDC42-203ENST00000400259 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
CDC42-203ENST00000400259 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
CDC42-203ENST00000400259 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
CDC42-203ENST00000400259 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
CDC42-203ENST00000400259 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
CDC42-203ENST00000400259 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.83
CDC42-203ENST00000400259 WIZO95785 1651 aa26.4■■□□□ 1.82
CDC42-203ENST00000400259 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
CDC42-203ENST00000400259 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
CDC42-203ENST00000400259 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
CDC42-203ENST00000400259 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
CDC42-203ENST00000400259 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.75
CDC42-203ENST00000400259 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
CDC42-203ENST00000400259 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
CDC42-203ENST00000400259 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
CDC42-203ENST00000400259 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
CDC42-203ENST00000400259 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
CDC42-203ENST00000400259 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
CDC42-203ENST00000400259 BAZ1BQ9UIG0 1483 aaKnown RBP25.54■■□□□ 1.68
CDC42-203ENST00000400259 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
CDC42-203ENST00000400259 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
CDC42-203ENST00000400259 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
CDC42-203ENST00000400259 NCAPD3P42695 1498 aa25.33■■□□□ 1.64
CDC42-203ENST00000400259 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
CDC42-203ENST00000400259 EEA1Q15075 1411 aa25.22■■□□□ 1.63
CDC42-203ENST00000400259 PCGF6Q9BYE7 350 aa25.21■■□□□ 1.63
CDC42-203ENST00000400259 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
CDC42-203ENST00000400259 SOGA1O94964 1423 aa25.13■■□□□ 1.61
CDC42-203ENST00000400259 TRIM26Q12899 539 aaPredicted RBP25.07■■□□□ 1.6
CDC42-203ENST00000400259 HRCP23327 699 aa25.04■■□□□ 1.6
CDC42-203ENST00000400259 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
CDC42-203ENST00000400259 RUSC2Q8N2Y8 1516 aa25.02■■□□□ 1.6
CDC42-203ENST00000400259 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
CDC42-203ENST00000400259 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
CDC42-203ENST00000400259 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
CDC42-203ENST00000400259 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
CDC42-203ENST00000400259 CFTRP13569 1480 aa24.94■■□□□ 1.58
CDC42-203ENST00000400259 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
CDC42-203ENST00000400259 KIF21BO75037 1637 aa24.92■■□□□ 1.58
CDC42-203ENST00000400259 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
CDC42-203ENST00000400259 GOLGA3Q08378 1498 aa24.9■■□□□ 1.58
CDC42-203ENST00000400259 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
CDC42-203ENST00000400259 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
CDC42-203ENST00000400259 CUX1P39880 1505 aa24.79■■□□□ 1.56
CDC42-203ENST00000400259 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.54
CDC42-203ENST00000400259 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
CDC42-203ENST00000400259 PPARGC1BQ86YN6 1023 aaKnown RBP24.63■■□□□ 1.53
CDC42-203ENST00000400259 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
CDC42-203ENST00000400259 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
CDC42-203ENST00000400259 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
CDC42-203ENST00000400259 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
CDC42-203ENST00000400259 CLIP1P30622 1438 aa24.5■■□□□ 1.51
CDC42-203ENST00000400259 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
CDC42-203ENST00000400259 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
CDC42-203ENST00000400259 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
CDC42-203ENST00000400259 ZEB1P37275 1124 aaPredicted RBP24.39■■□□□ 1.5
CDC42-203ENST00000400259 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
CDC42-203ENST00000400259 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
CDC42-203ENST00000400259 CUX2O14529 1486 aa24.33■■□□□ 1.49
CDC42-203ENST00000400259 NESP48681 1621 aa24.31■■□□□ 1.48
CDC42-203ENST00000400259 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
CDC42-203ENST00000400259 IGF1RP08069 1367 aa24.25■■□□□ 1.47
CDC42-203ENST00000400259 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
CDC42-203ENST00000400259 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
CDC42-203ENST00000400259 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.46
CDC42-203ENST00000400259 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
CDC42-203ENST00000400259 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
CDC42-203ENST00000400259 URB2Q14146 1524 aaKnown RBP24.13■■□□□ 1.45
CDC42-203ENST00000400259 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
CDC42-203ENST00000400259 TTBK1Q5TCY1 1321 aaPredicted RBP24.12■■□□□ 1.45
CDC42-203ENST00000400259 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
CDC42-203ENST00000400259 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
CDC42-203ENST00000400259 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
CDC42-203ENST00000400259 CUL7Q14999 1698 aa24.09■■□□□ 1.45
CDC42-203ENST00000400259 APLP2Q06481 763 aa24.07■■□□□ 1.44
CDC42-203ENST00000400259 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
CDC42-203ENST00000400259 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
CDC42-203ENST00000400259 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
CDC42-203ENST00000400259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
CDC42-203ENST00000400259 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.43
CDC42-203ENST00000400259 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
CDC42-203ENST00000400259 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
CDC42-203ENST00000400259 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
CDC42-203ENST00000400259 EFCAB5A4FU69 1503 aa23.86■■□□□ 1.41
CDC42-203ENST00000400259 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
CDC42-203ENST00000400259 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
CDC42-203ENST00000400259 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CDC42-203ENST00000400259 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms