RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
RAP1B-230ENST00000543697 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
RAP1B-230ENST00000543697 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
RAP1B-230ENST00000543697 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
RAP1B-230ENST00000543697 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
RAP1B-230ENST00000543697 FOXD1Q16676 465 aa20.73■□□□□ 0.91
RAP1B-230ENST00000543697 ADRA2BP18089 450 aa20.34■□□□□ 0.85
RAP1B-230ENST00000543697 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
RAP1B-230ENST00000543697 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
RAP1B-230ENST00000543697 KCNA4P22459 653 aa19.44■□□□□ 0.7
RAP1B-230ENST00000543697 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
RAP1B-230ENST00000543697 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
RAP1B-230ENST00000543697 MSH5O43196 834 aa19.16■□□□□ 0.66
RAP1B-230ENST00000543697 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
RAP1B-230ENST00000543697 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
RAP1B-230ENST00000543697 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
RAP1B-230ENST00000543697 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
RAP1B-230ENST00000543697 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
RAP1B-230ENST00000543697 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
RAP1B-230ENST00000543697 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
RAP1B-230ENST00000543697 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
RAP1B-230ENST00000543697 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
RAP1B-230ENST00000543697 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
RAP1B-230ENST00000543697 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
RAP1B-230ENST00000543697 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
RAP1B-230ENST00000543697 ZBTB22O15209 634 aa17.83■□□□□ 0.44
RAP1B-230ENST00000543697 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
RAP1B-230ENST00000543697 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
RAP1B-230ENST00000543697 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
RAP1B-230ENST00000543697 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
RAP1B-230ENST00000543697 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
RAP1B-230ENST00000543697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
RAP1B-230ENST00000543697 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
RAP1B-230ENST00000543697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAP1B-230ENST00000543697 ABCC9O60706 1549 aa17.1■□□□□ 0.33
RAP1B-230ENST00000543697 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
RAP1B-230ENST00000543697 APLP2Q06481 763 aa16.88■□□□□ 0.29
RAP1B-230ENST00000543697 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
RAP1B-230ENST00000543697 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
RAP1B-230ENST00000543697 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
RAP1B-230ENST00000543697 FKBP8Q14318 412 aa16.53■□□□□ 0.24
RAP1B-230ENST00000543697 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
RAP1B-230ENST00000543697 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
RAP1B-230ENST00000543697 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
RAP1B-230ENST00000543697 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
RAP1B-230ENST00000543697 FBLN2P98095 1184 aa16.19■□□□□ 0.18
RAP1B-230ENST00000543697 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
RAP1B-230ENST00000543697 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
RAP1B-230ENST00000543697 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
RAP1B-230ENST00000543697 CAPN15O75808 1086 aa16.1■□□□□ 0.17
RAP1B-230ENST00000543697 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
RAP1B-230ENST00000543697 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
RAP1B-230ENST00000543697 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
RAP1B-230ENST00000543697 POLA2Q14181 598 aa16.03■□□□□ 0.16
RAP1B-230ENST00000543697 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
RAP1B-230ENST00000543697 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
RAP1B-230ENST00000543697 PROM2Q8N271 834 aa15.93■□□□□ 0.14
RAP1B-230ENST00000543697 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
RAP1B-230ENST00000543697 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
RAP1B-230ENST00000543697 ABCB7O75027 752 aa15.72■□□□□ 0.11
RAP1B-230ENST00000543697 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
RAP1B-230ENST00000543697 DSG3P32926 999 aa15.71■□□□□ 0.11
RAP1B-230ENST00000543697 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
RAP1B-230ENST00000543697 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
RAP1B-230ENST00000543697 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
RAP1B-230ENST00000543697 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
RAP1B-230ENST00000543697 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
RAP1B-230ENST00000543697 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
RAP1B-230ENST00000543697 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
RAP1B-230ENST00000543697 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
RAP1B-230ENST00000543697 SSUH2Q9Y2M2 353 aa15.49■□□□□ 0.07
RAP1B-230ENST00000543697 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
RAP1B-230ENST00000543697 CACNB1Q02641 598 aaPredicted RBP15.45■□□□□ 0.06
RAP1B-230ENST00000543697 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
RAP1B-230ENST00000543697 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
RAP1B-230ENST00000543697 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
RAP1B-230ENST00000543697 IFNLR1Q8IU57 520 aaPredicted RBP15.37■□□□□ 0.05
RAP1B-230ENST00000543697 NACADO15069 1562 aa15.32■□□□□ 0.04
RAP1B-230ENST00000543697 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
RAP1B-230ENST00000543697 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
RAP1B-230ENST00000543697 CUX2O14529 1486 aa15.23■□□□□ 0.03
RAP1B-230ENST00000543697 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
RAP1B-230ENST00000543697 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
RAP1B-230ENST00000543697 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
RAP1B-230ENST00000543697 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
RAP1B-230ENST00000543697 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
RAP1B-230ENST00000543697 MIER1Q8N108 512 aa15.11■□□□□ 0.01
RAP1B-230ENST00000543697 PKD2Q13563 968 aa15.09■□□□□ 0.01
RAP1B-230ENST00000543697 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
RAP1B-230ENST00000543697 AKT1S1Q96B36 256 aa15.05■□□□□ -0
RAP1B-230ENST00000543697 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
RAP1B-230ENST00000543697 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
RAP1B-230ENST00000543697 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
RAP1B-230ENST00000543697 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
RAP1B-230ENST00000543697 ECM2O94769 699 aaPredicted RBP14.95□□□□□ -0.02
RAP1B-230ENST00000543697 GSE1Q14687 1217 aa14.83□□□□□ -0.04
RAP1B-230ENST00000543697 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
RAP1B-230ENST00000543697 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
RAP1B-230ENST00000543697 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
RAP1B-230ENST00000543697 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms