RNA–Protein interactions for RNA: ENST00000471398.1

VWA1-202, Transcript of von Willebrand factor A domain containing 1, humanhuman

TSL 3

Gene VWA1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA1-202ENST00000471398 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
VWA1-202ENST00000471398 ABCC9O60706 1549 aa40■■■■□ 3.99
VWA1-202ENST00000471398 CCDC180Q9P1Z9 1646 aa39.87■■■■□ 3.97
VWA1-202ENST00000471398 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
VWA1-202ENST00000471398 NACADO15069 1562 aa37.78■■■■□ 3.64
VWA1-202ENST00000471398 DNAJC5BQ9UF47 199 aa37.64■■■■□ 3.62
VWA1-202ENST00000471398 DCAF8L2P0C7V8 631 aa37.57■■■■□ 3.6
VWA1-202ENST00000471398 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.55
VWA1-202ENST00000471398 PABPN1Q86U42 306 aaKnown RBP eCLIP37.24■■■■□ 3.55
VWA1-202ENST00000471398 UNC13AQ9UPW8 1703 aa37.04■■■■□ 3.52
VWA1-202ENST00000471398 BICRAQ9NZM4 1560 aa36.88■■■■□ 3.49
VWA1-202ENST00000471398 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
VWA1-202ENST00000471398 DCAF1Q9Y4B6 1507 aa36.7■■■■□ 3.47
VWA1-202ENST00000471398 SHROOM4Q9ULL8 1493 aa36.5■■■■□ 3.43
VWA1-202ENST00000471398 SCRIBQ14160 1630 aa36.27■■■■□ 3.4
VWA1-202ENST00000471398 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
VWA1-202ENST00000471398 CECR2Q9BXF3 1484 aa36.08■■■■□ 3.37
VWA1-202ENST00000471398 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
VWA1-202ENST00000471398 DNAJC5Q9H3Z4 198 aa35■■■■□ 3.19
VWA1-202ENST00000471398 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
VWA1-202ENST00000471398 ATAD2BQ9ULI0 1458 aa34.73■■■■□ 3.15
VWA1-202ENST00000471398 SMARCA2P51531 1590 aa34.66■■■■□ 3.14
VWA1-202ENST00000471398 SMARCA4P51532 1647 aa34.63■■■■□ 3.13
VWA1-202ENST00000471398 CUX2O14529 1486 aa34.6■■■■□ 3.13
VWA1-202ENST00000471398 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
VWA1-202ENST00000471398 ERCC6Q03468 1493 aa34.59■■■■□ 3.13
VWA1-202ENST00000471398 BAZ1AQ9NRL2 1556 aaPredicted RBP34.49■■■■□ 3.11
VWA1-202ENST00000471398 BAZ1BQ9UIG0 1483 aaKnown RBP34.4■■■■□ 3.1
VWA1-202ENST00000471398 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.09
VWA1-202ENST00000471398 NESP48681 1621 aa34.3■■■■□ 3.08
VWA1-202ENST00000471398 MROH2BQ7Z745 1585 aa34.17■■■■□ 3.06
VWA1-202ENST00000471398 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
VWA1-202ENST00000471398 THOC2Q8NI27 1593 aaKnown RBP33.97■■■■□ 3.03
VWA1-202ENST00000471398 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
VWA1-202ENST00000471398 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
VWA1-202ENST00000471398 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
VWA1-202ENST00000471398 WIZO95785 1651 aa33.71■■■□□ 2.99
VWA1-202ENST00000471398 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
VWA1-202ENST00000471398 WDR62O43379 1518 aa33.53■■■□□ 2.96
VWA1-202ENST00000471398 CEP164Q9UPV0 1460 aa33.47■■■□□ 2.95
VWA1-202ENST00000471398 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
VWA1-202ENST00000471398 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
VWA1-202ENST00000471398 CFTRP13569 1480 aa33.4■■■□□ 2.94
VWA1-202ENST00000471398 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
VWA1-202ENST00000471398 TRIM41Q8WV44 630 aa33.12■■■□□ 2.89
VWA1-202ENST00000471398 URB2Q14146 1524 aaKnown RBP33.11■■■□□ 2.89
VWA1-202ENST00000471398 OSCARQ8IYS5 282 aa33.04■■■□□ 2.88
VWA1-202ENST00000471398 CCDC88BA6NC98 1476 aa32.97■■■□□ 2.87
VWA1-202ENST00000471398 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
VWA1-202ENST00000471398 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
VWA1-202ENST00000471398 TOPBP1Q92547 1522 aa32.76■■■□□ 2.83
VWA1-202ENST00000471398 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
VWA1-202ENST00000471398 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
VWA1-202ENST00000471398 DNMBPQ6XZF7 1577 aa32.62■■■□□ 2.81
VWA1-202ENST00000471398 EIF4G3O43432 1585 aaKnown RBP32.51■■■□□ 2.79
VWA1-202ENST00000471398 RIMBP3CA6NJZ7 1639 aa32.49■■■□□ 2.79
VWA1-202ENST00000471398 RIMBP3BA6NNM3 1639 aa32.49■■■□□ 2.79
VWA1-202ENST00000471398 RIMBP3Q9UFD9 1639 aa32.49■■■□□ 2.79
VWA1-202ENST00000471398 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
VWA1-202ENST00000471398 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.785e-8■■■■■ 28.2
VWA1-202ENST00000471398 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
VWA1-202ENST00000471398 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
VWA1-202ENST00000471398 SOGA1O94964 1423 aa32.3■■■□□ 2.76
VWA1-202ENST00000471398 FBLN2P98095 1184 aa32.3■■■□□ 2.76
VWA1-202ENST00000471398 RAD54L2Q9Y4B4 1467 aa32.28■■■□□ 2.76
VWA1-202ENST00000471398 CHD1O14646 1710 aa32.26■■■□□ 2.75
VWA1-202ENST00000471398 TDRD9Q8NDG6 1382 aaKnown RBP32.23■■■□□ 2.75
VWA1-202ENST00000471398 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
VWA1-202ENST00000471398 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
VWA1-202ENST00000471398 WDR97A6NE52 1622 aa32.17■■■□□ 2.74
VWA1-202ENST00000471398 CUX1P39880 1505 aa32.11■■■□□ 2.73
VWA1-202ENST00000471398 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
VWA1-202ENST00000471398 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
VWA1-202ENST00000471398 CHMP7Q8WUX9 453 aaPredicted RBP32.07■■■□□ 2.72
VWA1-202ENST00000471398 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
VWA1-202ENST00000471398 GRIN2BQ13224 1484 aa32.03■■■□□ 2.72
VWA1-202ENST00000471398 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
VWA1-202ENST00000471398 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.7
VWA1-202ENST00000471398 SYNJ2O15056 1496 aa31.94■■■□□ 2.7
VWA1-202ENST00000471398 TRHP20396 242 aaPredicted RBP31.93■■■□□ 2.7
VWA1-202ENST00000471398 GAPVD1Q14C86 1478 aa31.9■■■□□ 2.7
VWA1-202ENST00000471398 SUPT5HO00267 1087 aaKnown RBP31.88■■■□□ 2.69
VWA1-202ENST00000471398 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
VWA1-202ENST00000471398 PBRM1Q86U86 1689 aa31.78■■■□□ 2.68
VWA1-202ENST00000471398 ABCA5Q8WWZ7 1642 aa31.75■■■□□ 2.67
VWA1-202ENST00000471398 WRNQ14191 1432 aaPredicted RBP eCLIP31.72■■■□□ 2.67
VWA1-202ENST00000471398 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
VWA1-202ENST00000471398 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
VWA1-202ENST00000471398 BIVM-ERCC5R4GMW8 1640 aa31.56■■■□□ 2.64
VWA1-202ENST00000471398 ADAMTS12P58397 1594 aa31.51■■■□□ 2.64
VWA1-202ENST00000471398 NUP160Q12769 1436 aa31.51■■■□□ 2.64
VWA1-202ENST00000471398 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
VWA1-202ENST00000471398 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
VWA1-202ENST00000471398 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
VWA1-202ENST00000471398 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.62
VWA1-202ENST00000471398 SHROOM2Q13796 1616 aa31.34■■■□□ 2.61
VWA1-202ENST00000471398 AEBP2Q6ZN18 517 aaPredicted RBP31.33■■■□□ 2.61
VWA1-202ENST00000471398 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
VWA1-202ENST00000471398 JPH4Q96JJ6 628 aa31.22■■■□□ 2.59
VWA1-202ENST00000471398 RUSC2Q8N2Y8 1516 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms