Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 RANBP1-210ENST00000435265 1879 ntTSL 218.44■□□□□ 0.542e-6■■■■□ 22.6
NCBP2P52298 MTFMT-203ENST00000558460 1522 ntTSL 518.39■□□□□ 0.532e-6■■■■□ 22.6
NCBP2P52298 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.32■□□□□ 0.521e-6■■■■□ 22.6
NCBP2P52298 MIEF2-205ENST00000577216 543 ntTSL 517.82■□□□□ 0.442e-6■■■■□ 22.6
NCBP2P52298 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.81■□□□□ 0.442e-6■■■■□ 22.6
NCBP2P52298 RMDN3-208ENST00000560460 931 ntTSL 517.76■□□□□ 0.432e-6■■■■□ 22.6
NCBP2P52298 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.71■□□□□ 0.432e-6■■■■□ 22.6
NCBP2P52298 LUC7L-218ENST00000494366 668 ntTSL 317.44■□□□□ 0.382e-6■■■■□ 22.6
NCBP2P52298 MTFMT-202ENST00000543678 1216 ntTSL 217.42■□□□□ 0.382e-6■■■■□ 22.6
NCBP2P52298 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.41■□□□□ 0.382e-6■■■■□ 22.6
NCBP2P52298 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.372e-6■■■■□ 22.6
NCBP2P52298 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.372e-6■■■■□ 22.6
NCBP2P52298 PLEKHA2-203ENST00000519640 565 ntTSL 517.27■□□□□ 0.362e-6■■■■□ 22.6
NCBP2P52298 RANBP1-207ENST00000423859 832 ntTSL 316.83■□□□□ 0.282e-6■■■■□ 22.6
NCBP2P52298 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.75■□□□□ 0.272e-6■■■■□ 22.6
NCBP2P52298 RMDN3-211ENST00000560905 1008 ntTSL 216.74■□□□□ 0.272e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-217ENST00000638952 5678 ntTSL 516.71■□□□□ 0.273e-12■■■■□ 22.6
NCBP2P52298 MTFMT-205ENST00000559633 421 ntTSL 216.51■□□□□ 0.232e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.232e-6■■■■□ 22.6
NCBP2P52298 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-6■■■■□ 22.6
NCBP2P52298 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.22e-6■■■■□ 22.6
NCBP2P52298 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.182e-6■■■■□ 22.6
NCBP2P52298 RMDN3-207ENST00000558777 2139 ntTSL 216.18■□□□□ 0.182e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.163e-12■■■■□ 22.6
NCBP2P52298 UCK1-208ENST00000491309 2237 ntTSL 216.06■□□□□ 0.162e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-209ENST00000476241 4844 ntTSL 515.63■□□□□ 0.093e-12■■■■□ 22.6
NCBP2P52298 HNRNPU-228ENST00000640306 2917 ntTSL 515.61■□□□□ 0.093e-12■■■■□ 22.6
NCBP2P52298 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.53■□□□□ 0.082e-6■■■■□ 22.6
NCBP2P52298 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.072e-6■■■■□ 22.6
NCBP2P52298 MIEF2-209ENST00000583745 544 ntTSL 415.48■□□□□ 0.072e-6■■■■□ 22.6
NCBP2P52298 ACADVL-225ENST00000581378 752 ntTSL 315.36■□□□□ 0.055e-7■■■■□ 22.6
NCBP2P52298 RANBP1-205ENST00000418705 932 ntTSL 315.19■□□□□ 0.022e-6■■■■□ 22.6
NCBP2P52298 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.81□□□□□ -0.042e-6■■■■□ 22.6
NCBP2P52298 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.78□□□□□ -0.042e-6■■■■□ 22.6
NCBP2P52298 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.072e-6■■■■□ 22.6
NCBP2P52298 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.51□□□□□ -0.092e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.13e-12■■■■□ 22.6
NCBP2P52298 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.113e-12■■■■□ 22.6
NCBP2P52298 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.29□□□□□ -0.122e-6■■■■□ 22.6
NCBP2P52298 UCK1-209ENST00000494584 788 ntTSL 514.24□□□□□ -0.132e-6■■■■□ 22.6
NCBP2P52298 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.182e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-214ENST00000638475 2698 ntTSL 513.85□□□□□ -0.193e-12■■■■□ 22.6
NCBP2P52298 TMEM51-206ENST00000451326 766 ntTSL 313.8□□□□□ -0.22e-6■■■■□ 22.6
NCBP2P52298 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.73□□□□□ -0.212e-6■■■■□ 22.6
NCBP2P52298 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.72□□□□□ -0.212e-6■■■■□ 22.6
NCBP2P52298 RANBP1-203ENST00000411892 584 ntTSL 213.68□□□□□ -0.222e-6■■■■□ 22.6
NCBP2P52298 ATXN2-204ENST00000392645 2842 ntTSL 213.66□□□□□ -0.222e-6■■■■□ 22.6
NCBP2P52298 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■■■□ 22.6
NCBP2P52298 MTFMT-204ENST00000558614 852 ntTSL 313.46□□□□□ -0.252e-6■■■■□ 22.6
NCBP2P52298 RANBP1-211ENST00000448394 688 ntTSL 213.42□□□□□ -0.262e-6■■■■□ 22.6
NCBP2P52298 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.272e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-229ENST00000640440 871 ntTSL 313.15□□□□□ -0.33e-12■■■■□ 22.6
NCBP2P52298 ATXN2-218ENST00000549455 568 ntTSL 413.05□□□□□ -0.322e-6■■■■□ 22.6
NCBP2P52298 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.412e-6■■■■□ 22.6
NCBP2P52298 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.46□□□□□ -0.412e-6■■■■□ 22.6
NCBP2P52298 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.31□□□□□ -0.442e-6■■■■□ 22.6
NCBP2P52298 SHANK2-209ENST00000445654 522 ntTSL 312.24□□□□□ -0.452e-6■■■■□ 22.6
NCBP2P52298 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC12.1□□□□□ -0.472e-6■■■■□ 22.6
NCBP2P52298 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.52e-6■■■■□ 22.6
NCBP2P52298 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.86□□□□□ -0.512e-6■■■■□ 22.6
NCBP2P52298 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.532e-6■■■■□ 22.6
NCBP2P52298 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC11.72□□□□□ -0.532e-6■■■■□ 22.6
NCBP2P52298 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.62□□□□□ -0.552e-6■■■■□ 22.6
NCBP2P52298 PTTG1IP-207ENST00000494690 612 ntTSL 511.36□□□□□ -0.593e-12■■■■□ 22.6
NCBP2P52298 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)11.35□□□□□ -0.592e-6■■■■□ 22.6
NCBP2P52298 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.25□□□□□ -0.612e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-201ENST00000366521 860 ntTSL 211.16□□□□□ -0.622e-6■■■■□ 22.6
NCBP2P52298 SHANK2-205ENST00000412252 1376 ntTSL 511.05□□□□□ -0.642e-6■■■■□ 22.6
NCBP2P52298 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC10.97□□□□□ -0.652e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-213ENST00000497591 1201 ntTSL 510.96□□□□□ -0.652e-6■■■■□ 22.6
NCBP2P52298 FBXO38-206ENST00000503613 627 ntTSL 310.14□□□□□ -0.792e-6■■■■□ 22.6
NCBP2P52298 FBXO38-215ENST00000509411 761 ntTSL 39.52□□□□□ -0.892e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-208ENST00000473686 906 ntTSL 59.34□□□□□ -0.912e-6■■■■□ 22.6
NCBP2P52298 HNRNPU-224ENST00000640056 2045 ntTSL 59.31□□□□□ -0.923e-12■■■■□ 22.6
NCBP2P52298 FBXO38-211ENST00000508326 745 ntTSL 29.3□□□□□ -0.922e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-211ENST00000487845 1389 ntTSL 28.51□□□□□ -1.052e-6■■■■□ 22.6
NCBP2P52298 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.052e-6■■■■□ 22.6
NCBP2P52298 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.31□□□□□ -1.082e-6■■■■□ 22.6
NCBP2P52298 SHANK2-208ENST00000426687 460 ntTSL 57.97□□□□□ -1.132e-6■■■■□ 22.6
NCBP2P52298 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.6□□□□□ -1.192e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC7.46□□□□□ -1.222e-6■■■■□ 22.6
NCBP2P52298 ATP11A-205ENST00000419448 435 ntTSL 37.31□□□□□ -1.242e-6■■■■□ 22.6
NCBP2P52298 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.21□□□□□ -1.252e-6■■■■□ 22.6
NCBP2P52298 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.322e-6■■■■□ 22.6
NCBP2P52298 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.472e-6■■■■□ 22.6
NCBP2P52298 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.492e-6■■■■□ 22.6
NCBP2P52298 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.542e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-215ENST00000549220 557 ntTSL 45.43□□□□□ -1.542e-6■■■■□ 22.6
NCBP2P52298 CACNB4-205ENST00000434468 720 ntTSL 55.06□□□□□ -1.62e-6■■■■□ 22.6
NCBP2P52298 FBXO38-217ENST00000511080 514 ntTSL 45.04□□□□□ -1.62e-6■■■■□ 22.6
NCBP2P52298 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.62e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-212ENST00000495271 744 ntTSL 54.1□□□□□ -1.752e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-204ENST00000391837 738 ntTSL 53.08□□□□□ -1.922e-6■■■■□ 22.6
NCBP2P52298 CACNB4-251ENST00000637436 3520 ntTSL 53.06□□□□□ -1.922e-6■■■■□ 22.6
NCBP2P52298 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.488e-7■■■■□ 22.6
NCBP2P52298 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC10.83□□□□□ -0.688e-7■■■■□ 22.6
NCBP2P52298 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.39■□□□□ 0.055e-8■■■■□ 22.5
NCBP2P52298 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.892e-6■■■■□ 22.4
NCBP2P52298 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.892e-6■■■■□ 22.4
NCBP2P52298 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.922e-6■■■■□ 22.4
Retrieved 100 of 18,329 protein–RNA pairs in 217.2 ms