RNA–Protein interactions for RNA: ENST00000503613.5

FBXO38-206, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-206ENST00000503613 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
FBXO38-206ENST00000503613 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
FBXO38-206ENST00000503613 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
FBXO38-206ENST00000503613 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
FBXO38-206ENST00000503613 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
FBXO38-206ENST00000503613 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
FBXO38-206ENST00000503613 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
FBXO38-206ENST00000503613 ABCC9O60706 1549 aa19.45■□□□□ 0.7
FBXO38-206ENST00000503613 NACADO15069 1562 aa19.39■□□□□ 0.69
FBXO38-206ENST00000503613 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
FBXO38-206ENST00000503613 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
FBXO38-206ENST00000503613 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
FBXO38-206ENST00000503613 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
FBXO38-206ENST00000503613 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
FBXO38-206ENST00000503613 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
FBXO38-206ENST00000503613 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
FBXO38-206ENST00000503613 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
FBXO38-206ENST00000503613 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
FBXO38-206ENST00000503613 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
FBXO38-206ENST00000503613 WIZO95785 1651 aa18.41■□□□□ 0.54
FBXO38-206ENST00000503613 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
FBXO38-206ENST00000503613 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
FBXO38-206ENST00000503613 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
FBXO38-206ENST00000503613 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
FBXO38-206ENST00000503613 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
FBXO38-206ENST00000503613 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
FBXO38-206ENST00000503613 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
FBXO38-206ENST00000503613 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
FBXO38-206ENST00000503613 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
FBXO38-206ENST00000503613 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
FBXO38-206ENST00000503613 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
FBXO38-206ENST00000503613 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
FBXO38-206ENST00000503613 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
FBXO38-206ENST00000503613 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
FBXO38-206ENST00000503613 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
FBXO38-206ENST00000503613 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
FBXO38-206ENST00000503613 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
FBXO38-206ENST00000503613 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
FBXO38-206ENST00000503613 CFTRP13569 1480 aa17.49■□□□□ 0.39
FBXO38-206ENST00000503613 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
FBXO38-206ENST00000503613 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
FBXO38-206ENST00000503613 EEA1Q15075 1411 aa17.43■□□□□ 0.38
FBXO38-206ENST00000503613 FAM9AQ8IZU1 332 aaPredicted RBP17.42■□□□□ 0.38
FBXO38-206ENST00000503613 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
FBXO38-206ENST00000503613 SOGA1O94964 1423 aa17.33■□□□□ 0.36
FBXO38-206ENST00000503613 CUX1P39880 1505 aa17.3■□□□□ 0.36
FBXO38-206ENST00000503613 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
FBXO38-206ENST00000503613 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
FBXO38-206ENST00000503613 KIF21BO75037 1637 aa17.24■□□□□ 0.35
FBXO38-206ENST00000503613 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
FBXO38-206ENST00000503613 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
FBXO38-206ENST00000503613 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
FBXO38-206ENST00000503613 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
FBXO38-206ENST00000503613 NESP48681 1621 aa17.14■□□□□ 0.33
FBXO38-206ENST00000503613 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
FBXO38-206ENST00000503613 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
FBXO38-206ENST00000503613 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
FBXO38-206ENST00000503613 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
FBXO38-206ENST00000503613 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
FBXO38-206ENST00000503613 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
FBXO38-206ENST00000503613 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
FBXO38-206ENST00000503613 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
FBXO38-206ENST00000503613 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
FBXO38-206ENST00000503613 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
FBXO38-206ENST00000503613 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
FBXO38-206ENST00000503613 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
FBXO38-206ENST00000503613 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
FBXO38-206ENST00000503613 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
FBXO38-206ENST00000503613 CUX2O14529 1486 aa16.98■□□□□ 0.31
FBXO38-206ENST00000503613 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
FBXO38-206ENST00000503613 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
FBXO38-206ENST00000503613 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
FBXO38-206ENST00000503613 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
FBXO38-206ENST00000503613 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
FBXO38-206ENST00000503613 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
FBXO38-206ENST00000503613 IGF1RP08069 1367 aa16.88■□□□□ 0.29
FBXO38-206ENST00000503613 CLIP1P30622 1438 aa16.87■□□□□ 0.29
FBXO38-206ENST00000503613 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
FBXO38-206ENST00000503613 CUL7Q14999 1698 aa16.87■□□□□ 0.29
FBXO38-206ENST00000503613 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
FBXO38-206ENST00000503613 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
FBXO38-206ENST00000503613 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
FBXO38-206ENST00000503613 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
FBXO38-206ENST00000503613 WDR62O43379 1518 aa16.77■□□□□ 0.28
FBXO38-206ENST00000503613 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.27
FBXO38-206ENST00000503613 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
FBXO38-206ENST00000503613 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
FBXO38-206ENST00000503613 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
FBXO38-206ENST00000503613 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
FBXO38-206ENST00000503613 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
FBXO38-206ENST00000503613 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
FBXO38-206ENST00000503613 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
FBXO38-206ENST00000503613 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
FBXO38-206ENST00000503613 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
FBXO38-206ENST00000503613 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
FBXO38-206ENST00000503613 HRCP23327 699 aa16.62■□□□□ 0.25
FBXO38-206ENST00000503613 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
FBXO38-206ENST00000503613 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
FBXO38-206ENST00000503613 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
FBXO38-206ENST00000503613 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 357.7 ms