RNA–Protein interactions for RNA: ENST00000612256.4

ARFRP1-208, Transcript of ADP ribosylation factor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFRP1, Length 2,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFRP1-208ENST00000612256 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
ARFRP1-208ENST00000612256 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
ARFRP1-208ENST00000612256 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
ARFRP1-208ENST00000612256 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
ARFRP1-208ENST00000612256 DCAF8L2P0C7V8 631 aa34.26■■■■□ 3.07
ARFRP1-208ENST00000612256 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
ARFRP1-208ENST00000612256 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
ARFRP1-208ENST00000612256 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
ARFRP1-208ENST00000612256 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
ARFRP1-208ENST00000612256 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
ARFRP1-208ENST00000612256 ABCC9O60706 1549 aa32.61■■■□□ 2.81
ARFRP1-208ENST00000612256 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.74
ARFRP1-208ENST00000612256 NACADO15069 1562 aa32.1■■■□□ 2.73
ARFRP1-208ENST00000612256 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
ARFRP1-208ENST00000612256 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
ARFRP1-208ENST00000612256 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
ARFRP1-208ENST00000612256 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
ARFRP1-208ENST00000612256 PCGF6Q9BYE7 350 aa31.69■■■□□ 2.66
ARFRP1-208ENST00000612256 TRIM41Q8WV44 630 aa31.65■■■□□ 2.66
ARFRP1-208ENST00000612256 HRCP23327 699 aa31.63■■■□□ 2.65
ARFRP1-208ENST00000612256 WIZO95785 1651 aa31.57■■■□□ 2.64
ARFRP1-208ENST00000612256 FAM9AQ8IZU1 332 aaPredicted RBP31.56■■■□□ 2.64
ARFRP1-208ENST00000612256 PPARGC1BQ86YN6 1023 aaKnown RBP31.47■■■□□ 2.63
ARFRP1-208ENST00000612256 EHMT2Q96KQ7 1210 aa31.44■■■□□ 2.62
ARFRP1-208ENST00000612256 UNC13AQ9UPW8 1703 aa31.27■■■□□ 2.6
ARFRP1-208ENST00000612256 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
ARFRP1-208ENST00000612256 PABPN1Q86U42 306 aaKnown RBP eCLIP31.25■■■□□ 2.596e-7■■■□□ 16.5
ARFRP1-208ENST00000612256 SMARCA4P51532 1647 aa31.07■■■□□ 2.56
ARFRP1-208ENST00000612256 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
ARFRP1-208ENST00000612256 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
ARFRP1-208ENST00000612256 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
ARFRP1-208ENST00000612256 BICRAQ9NZM4 1560 aa30.89■■■□□ 2.54
ARFRP1-208ENST00000612256 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
ARFRP1-208ENST00000612256 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
ARFRP1-208ENST00000612256 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
ARFRP1-208ENST00000612256 PELP1Q8IZL8 1130 aaKnown RBP30.8■■■□□ 2.52
ARFRP1-208ENST00000612256 SOGA1O94964 1423 aa30.5■■■□□ 2.47
ARFRP1-208ENST00000612256 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
ARFRP1-208ENST00000612256 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
ARFRP1-208ENST00000612256 SCAF1Q9H7N4 1312 aaKnown RBP30.37■■■□□ 2.45
ARFRP1-208ENST00000612256 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
ARFRP1-208ENST00000612256 TTBK1Q5TCY1 1321 aaPredicted RBP30.32■■■□□ 2.44
ARFRP1-208ENST00000612256 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
ARFRP1-208ENST00000612256 CSRNP3Q8WYN3 585 aa30.26■■■□□ 2.43
ARFRP1-208ENST00000612256 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
ARFRP1-208ENST00000612256 UBTFP17480 764 aaKnown RBP30.24■■■□□ 2.43
ARFRP1-208ENST00000612256 CEP162Q5TB80 1403 aa30.16■■■□□ 2.42
ARFRP1-208ENST00000612256 SYNJ1O43426 1573 aa30.12■■■□□ 2.41
ARFRP1-208ENST00000612256 TNIKQ9UKE5 1360 aa30.06■■■□□ 2.4
ARFRP1-208ENST00000612256 ZEB1P37275 1124 aaPredicted RBP30.05■■■□□ 2.4
ARFRP1-208ENST00000612256 EEA1Q15075 1411 aa30.04■■■□□ 2.4
ARFRP1-208ENST00000612256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.99■■■□□ 2.39
ARFRP1-208ENST00000612256 GOLGA3Q08378 1498 aa29.94■■■□□ 2.38
ARFRP1-208ENST00000612256 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
ARFRP1-208ENST00000612256 CCER1Q8TC90 406 aaPredicted RBP29.81■■■□□ 2.36
ARFRP1-208ENST00000612256 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
ARFRP1-208ENST00000612256 NCAPD3P42695 1498 aa29.76■■■□□ 2.36
ARFRP1-208ENST00000612256 RAPGEF2Q9Y4G8 1499 aa29.72■■■□□ 2.35
ARFRP1-208ENST00000612256 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
ARFRP1-208ENST00000612256 KIF21BO75037 1637 aa29.68■■■□□ 2.34
ARFRP1-208ENST00000612256 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
ARFRP1-208ENST00000612256 CLIP1P30622 1438 aa29.66■■■□□ 2.34
ARFRP1-208ENST00000612256 MYT1Q01538 1121 aa29.55■■■□□ 2.32
ARFRP1-208ENST00000612256 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
ARFRP1-208ENST00000612256 CUX1P39880 1505 aa29.54■■■□□ 2.32
ARFRP1-208ENST00000612256 CFTRP13569 1480 aa29.48■■■□□ 2.31
ARFRP1-208ENST00000612256 HNRNPUL2Q1KMD3 747 aaKnown RBP29.46■■■□□ 2.31
ARFRP1-208ENST00000612256 VPS8Q8N3P4 1428 aa29.44■■■□□ 2.3
ARFRP1-208ENST00000612256 NEUROD1Q13562 356 aa29.43■■■□□ 2.3
ARFRP1-208ENST00000612256 APLP2Q06481 763 aa29.42■■■□□ 2.3
ARFRP1-208ENST00000612256 PRXQ9BXM0 1461 aa29.35■■■□□ 2.29
ARFRP1-208ENST00000612256 ACIN1Q9UKV3 1341 aaKnown RBP29.33■■■□□ 2.29
ARFRP1-208ENST00000612256 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
ARFRP1-208ENST00000612256 KIF27Q86VH2 1401 aa29.32■■■□□ 2.28
ARFRP1-208ENST00000612256 CADPSQ9ULU8 1353 aa29.25■■■□□ 2.27
ARFRP1-208ENST00000612256 CC2D2AQ9P2K1 1620 aa29.25■■■□□ 2.27
ARFRP1-208ENST00000612256 ERICH3Q5RHP9 1530 aa29.23■■■□□ 2.27
ARFRP1-208ENST00000612256 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
ARFRP1-208ENST00000612256 CUX2O14529 1486 aa29.17■■■□□ 2.26
ARFRP1-208ENST00000612256 KANK4Q5T7N3 995 aaPredicted RBP29.15■■■□□ 2.26
ARFRP1-208ENST00000612256 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
ARFRP1-208ENST00000612256 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
ARFRP1-208ENST00000612256 IGF1RP08069 1367 aa29.07■■■□□ 2.24
ARFRP1-208ENST00000612256 DIEXFQ68CQ4 756 aaKnown RBP29.03■■■□□ 2.24
ARFRP1-208ENST00000612256 ARHGAP35Q9NRY4 1499 aa28.99■■■□□ 2.23
ARFRP1-208ENST00000612256 NESP48681 1621 aa28.99■■■□□ 2.23
ARFRP1-208ENST00000612256 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
ARFRP1-208ENST00000612256 CARMIL1Q5VZK9 1371 aa28.95■■■□□ 2.23
ARFRP1-208ENST00000612256 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
ARFRP1-208ENST00000612256 P3H3Q8IVL6 736 aa28.89■■■□□ 2.21
ARFRP1-208ENST00000612256 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
ARFRP1-208ENST00000612256 ITGAEP38570 1179 aa28.85■■■□□ 2.21
ARFRP1-208ENST00000612256 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
ARFRP1-208ENST00000612256 CENPBP07199 599 aaPredicted RBP28.84■■■□□ 2.21
ARFRP1-208ENST00000612256 ATP1B4Q9UN42 357 aaPredicted RBP28.77■■■□□ 2.2
ARFRP1-208ENST00000612256 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
ARFRP1-208ENST00000612256 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
ARFRP1-208ENST00000612256 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
ARFRP1-208ENST00000612256 YTHDC1Q96MU7 727 aaKnown RBP28.71■■■□□ 2.19
ARFRP1-208ENST00000612256 RRBP1Q9P2E9 1410 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms