RNA–Protein interactions for RNA: ENST00000366521.7

EFCAB2-201, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2

Gene EFCAB2, Length 860 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-201ENST00000366521 AEBP2Q6ZN18 517 aaPredicted RBP32.85■■■□□ 2.85
EFCAB2-201ENST00000366521 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
EFCAB2-201ENST00000366521 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
EFCAB2-201ENST00000366521 SENP3Q9H4L4 574 aaPredicted RBP28.02■■■□□ 2.08
EFCAB2-201ENST00000366521 PHF23Q9BUL5 403 aaPredicted RBP27.69■■■□□ 2.02
EFCAB2-201ENST00000366521 CCDC180Q9P1Z9 1646 aa26.18■■□□□ 1.78
EFCAB2-201ENST00000366521 FOXD1Q16676 465 aa26.14■■□□□ 1.78
EFCAB2-201ENST00000366521 ABCC9O60706 1549 aa26■■□□□ 1.75
EFCAB2-201ENST00000366521 PLPPR3Q6T4P5 718 aa25.44■■□□□ 1.66
EFCAB2-201ENST00000366521 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
EFCAB2-201ENST00000366521 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
EFCAB2-201ENST00000366521 NACADO15069 1562 aa24.76■■□□□ 1.55
EFCAB2-201ENST00000366521 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
EFCAB2-201ENST00000366521 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
EFCAB2-201ENST00000366521 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
EFCAB2-201ENST00000366521 MSH5O43196 834 aa24.47■■□□□ 1.51
EFCAB2-201ENST00000366521 ADRA2BP18089 450 aa24.41■■□□□ 1.5
EFCAB2-201ENST00000366521 PIAS4Q8N2W9 510 aaPredicted RBP24.41■■□□□ 1.5
EFCAB2-201ENST00000366521 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
EFCAB2-201ENST00000366521 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
EFCAB2-201ENST00000366521 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
EFCAB2-201ENST00000366521 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
EFCAB2-201ENST00000366521 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.44
EFCAB2-201ENST00000366521 POTEDQ86YR6 584 aa24.01■■□□□ 1.43
EFCAB2-201ENST00000366521 SCRIBQ14160 1630 aa24■■□□□ 1.43
EFCAB2-201ENST00000366521 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
EFCAB2-201ENST00000366521 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
EFCAB2-201ENST00000366521 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
EFCAB2-201ENST00000366521 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
EFCAB2-201ENST00000366521 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
EFCAB2-201ENST00000366521 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
EFCAB2-201ENST00000366521 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
EFCAB2-201ENST00000366521 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
EFCAB2-201ENST00000366521 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
EFCAB2-201ENST00000366521 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
EFCAB2-201ENST00000366521 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
EFCAB2-201ENST00000366521 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
EFCAB2-201ENST00000366521 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
EFCAB2-201ENST00000366521 WIZO95785 1651 aa22.5■■□□□ 1.19
EFCAB2-201ENST00000366521 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
EFCAB2-201ENST00000366521 NESP48681 1621 aa22.44■■□□□ 1.18
EFCAB2-201ENST00000366521 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
EFCAB2-201ENST00000366521 MAPK8IP2Q13387 824 aaPredicted RBP22.41■■□□□ 1.18
EFCAB2-201ENST00000366521 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
EFCAB2-201ENST00000366521 PPP4R3CPQ6ZMV5 832 aa22.34■■□□□ 1.17
EFCAB2-201ENST00000366521 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
EFCAB2-201ENST00000366521 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
EFCAB2-201ENST00000366521 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
EFCAB2-201ENST00000366521 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
EFCAB2-201ENST00000366521 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
EFCAB2-201ENST00000366521 CUX2O14529 1486 aa22.15■■□□□ 1.14
EFCAB2-201ENST00000366521 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
EFCAB2-201ENST00000366521 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
EFCAB2-201ENST00000366521 CFTRP13569 1480 aa22.05■■□□□ 1.12
EFCAB2-201ENST00000366521 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
EFCAB2-201ENST00000366521 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
EFCAB2-201ENST00000366521 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
EFCAB2-201ENST00000366521 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
EFCAB2-201ENST00000366521 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
EFCAB2-201ENST00000366521 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
EFCAB2-201ENST00000366521 WDR62O43379 1518 aa21.83■■□□□ 1.09
EFCAB2-201ENST00000366521 CNKSR2Q8WXI2 1034 aa21.82■■□□□ 1.08
EFCAB2-201ENST00000366521 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
EFCAB2-201ENST00000366521 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
EFCAB2-201ENST00000366521 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
EFCAB2-201ENST00000366521 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
EFCAB2-201ENST00000366521 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
EFCAB2-201ENST00000366521 HOXD11P31277 338 aaPredicted RBP21.52■■□□□ 1.04
EFCAB2-201ENST00000366521 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
EFCAB2-201ENST00000366521 RNF216Q9NWF9 866 aaPredicted RBP21.5■■□□□ 1.03
EFCAB2-201ENST00000366521 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
EFCAB2-201ENST00000366521 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
EFCAB2-201ENST00000366521 KCNA4P22459 653 aa21.43■■□□□ 1.02
EFCAB2-201ENST00000366521 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
EFCAB2-201ENST00000366521 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
EFCAB2-201ENST00000366521 SOGA1O94964 1423 aa21.39■■□□□ 1.02
EFCAB2-201ENST00000366521 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
EFCAB2-201ENST00000366521 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
EFCAB2-201ENST00000366521 CUX1P39880 1505 aa21.36■■□□□ 1.01
EFCAB2-201ENST00000366521 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.016e-6■■■■□ 25.1
EFCAB2-201ENST00000366521 NPM3O75607 178 aaKnown RBP21.35■■□□□ 1.01
EFCAB2-201ENST00000366521 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
EFCAB2-201ENST00000366521 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
EFCAB2-201ENST00000366521 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
EFCAB2-201ENST00000366521 FBLN2P98095 1184 aa21.26■□□□□ 0.99
EFCAB2-201ENST00000366521 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
EFCAB2-201ENST00000366521 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
EFCAB2-201ENST00000366521 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
EFCAB2-201ENST00000366521 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
EFCAB2-201ENST00000366521 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
EFCAB2-201ENST00000366521 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
EFCAB2-201ENST00000366521 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
EFCAB2-201ENST00000366521 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
EFCAB2-201ENST00000366521 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
EFCAB2-201ENST00000366521 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
EFCAB2-201ENST00000366521 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
EFCAB2-201ENST00000366521 WDR97A6NE52 1622 aa21.06■□□□□ 0.96
EFCAB2-201ENST00000366521 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
EFCAB2-201ENST00000366521 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
EFCAB2-201ENST00000366521 CHD1O14646 1710 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms