RNA–Protein interactions for RNA: ENST00000447569.6

EFCAB2-207, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-207ENST00000447569 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
EFCAB2-207ENST00000447569 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
EFCAB2-207ENST00000447569 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
EFCAB2-207ENST00000447569 ABCC9O60706 1549 aa21.02■□□□□ 0.96
EFCAB2-207ENST00000447569 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
EFCAB2-207ENST00000447569 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
EFCAB2-207ENST00000447569 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
EFCAB2-207ENST00000447569 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
EFCAB2-207ENST00000447569 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
EFCAB2-207ENST00000447569 NACADO15069 1562 aa19.4■□□□□ 0.7
EFCAB2-207ENST00000447569 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
EFCAB2-207ENST00000447569 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
EFCAB2-207ENST00000447569 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
EFCAB2-207ENST00000447569 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
EFCAB2-207ENST00000447569 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
EFCAB2-207ENST00000447569 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
EFCAB2-207ENST00000447569 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
EFCAB2-207ENST00000447569 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
EFCAB2-207ENST00000447569 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
EFCAB2-207ENST00000447569 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
EFCAB2-207ENST00000447569 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
EFCAB2-207ENST00000447569 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
EFCAB2-207ENST00000447569 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
EFCAB2-207ENST00000447569 CUX2O14529 1486 aa18.36■□□□□ 0.53
EFCAB2-207ENST00000447569 FOXD1Q16676 465 aa18.3■□□□□ 0.52
EFCAB2-207ENST00000447569 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
EFCAB2-207ENST00000447569 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
EFCAB2-207ENST00000447569 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
EFCAB2-207ENST00000447569 NESP48681 1621 aa17.86■□□□□ 0.45
EFCAB2-207ENST00000447569 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
EFCAB2-207ENST00000447569 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
EFCAB2-207ENST00000447569 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
EFCAB2-207ENST00000447569 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
EFCAB2-207ENST00000447569 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
EFCAB2-207ENST00000447569 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
EFCAB2-207ENST00000447569 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
EFCAB2-207ENST00000447569 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
EFCAB2-207ENST00000447569 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
EFCAB2-207ENST00000447569 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
EFCAB2-207ENST00000447569 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
EFCAB2-207ENST00000447569 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
EFCAB2-207ENST00000447569 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
EFCAB2-207ENST00000447569 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
EFCAB2-207ENST00000447569 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
EFCAB2-207ENST00000447569 MSH5O43196 834 aa17.38■□□□□ 0.37
EFCAB2-207ENST00000447569 WDR62O43379 1518 aa17.37■□□□□ 0.37
EFCAB2-207ENST00000447569 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
EFCAB2-207ENST00000447569 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
EFCAB2-207ENST00000447569 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
EFCAB2-207ENST00000447569 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
EFCAB2-207ENST00000447569 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
EFCAB2-207ENST00000447569 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
EFCAB2-207ENST00000447569 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
EFCAB2-207ENST00000447569 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
EFCAB2-207ENST00000447569 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
EFCAB2-207ENST00000447569 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
EFCAB2-207ENST00000447569 CFTRP13569 1480 aa17.03■□□□□ 0.32
EFCAB2-207ENST00000447569 WIZO95785 1651 aa16.98■□□□□ 0.31
EFCAB2-207ENST00000447569 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
EFCAB2-207ENST00000447569 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
EFCAB2-207ENST00000447569 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
EFCAB2-207ENST00000447569 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
EFCAB2-207ENST00000447569 FBLN2P98095 1184 aa16.85■□□□□ 0.29
EFCAB2-207ENST00000447569 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
EFCAB2-207ENST00000447569 CHD1O14646 1710 aa16.78■□□□□ 0.28
EFCAB2-207ENST00000447569 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
EFCAB2-207ENST00000447569 PRDM2Q13029 1718 aa16.77■□□□□ 0.28
EFCAB2-207ENST00000447569 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
EFCAB2-207ENST00000447569 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.276e-6■■■■□ 25.1
EFCAB2-207ENST00000447569 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
EFCAB2-207ENST00000447569 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
EFCAB2-207ENST00000447569 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
EFCAB2-207ENST00000447569 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
EFCAB2-207ENST00000447569 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
EFCAB2-207ENST00000447569 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
EFCAB2-207ENST00000447569 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
EFCAB2-207ENST00000447569 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
EFCAB2-207ENST00000447569 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
EFCAB2-207ENST00000447569 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
EFCAB2-207ENST00000447569 ADRA2BP18089 450 aa16.57■□□□□ 0.24
EFCAB2-207ENST00000447569 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
EFCAB2-207ENST00000447569 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
EFCAB2-207ENST00000447569 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
EFCAB2-207ENST00000447569 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
EFCAB2-207ENST00000447569 SOGA1O94964 1423 aa16.51■□□□□ 0.23
EFCAB2-207ENST00000447569 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
EFCAB2-207ENST00000447569 ILDR1Q86SU0 546 aaPredicted RBP16.48■□□□□ 0.23
EFCAB2-207ENST00000447569 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
EFCAB2-207ENST00000447569 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
EFCAB2-207ENST00000447569 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
EFCAB2-207ENST00000447569 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
EFCAB2-207ENST00000447569 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
EFCAB2-207ENST00000447569 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
EFCAB2-207ENST00000447569 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
EFCAB2-207ENST00000447569 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
EFCAB2-207ENST00000447569 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
EFCAB2-207ENST00000447569 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
EFCAB2-207ENST00000447569 CUX1P39880 1505 aa16.22■□□□□ 0.19
EFCAB2-207ENST00000447569 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
EFCAB2-207ENST00000447569 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms