RNA–Protein interactions for RNA: ENST00000497591.5

EFCAB2-213, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 5

Gene EFCAB2, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-213ENST00000497591 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
EFCAB2-213ENST00000497591 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
EFCAB2-213ENST00000497591 ABCC9O60706 1549 aa26.47■■□□□ 1.83
EFCAB2-213ENST00000497591 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
EFCAB2-213ENST00000497591 NACADO15069 1562 aa25.05■■□□□ 1.6
EFCAB2-213ENST00000497591 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
EFCAB2-213ENST00000497591 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
EFCAB2-213ENST00000497591 DNAJC5BQ9UF47 199 aa24.68■■□□□ 1.54
EFCAB2-213ENST00000497591 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
EFCAB2-213ENST00000497591 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
EFCAB2-213ENST00000497591 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
EFCAB2-213ENST00000497591 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
EFCAB2-213ENST00000497591 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
EFCAB2-213ENST00000497591 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
EFCAB2-213ENST00000497591 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
EFCAB2-213ENST00000497591 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
EFCAB2-213ENST00000497591 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
EFCAB2-213ENST00000497591 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
EFCAB2-213ENST00000497591 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
EFCAB2-213ENST00000497591 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
EFCAB2-213ENST00000497591 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
EFCAB2-213ENST00000497591 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
EFCAB2-213ENST00000497591 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
EFCAB2-213ENST00000497591 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
EFCAB2-213ENST00000497591 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
EFCAB2-213ENST00000497591 CUX2O14529 1486 aa22.88■■□□□ 1.25
EFCAB2-213ENST00000497591 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
EFCAB2-213ENST00000497591 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
EFCAB2-213ENST00000497591 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
EFCAB2-213ENST00000497591 NESP48681 1621 aa22.7■■□□□ 1.22
EFCAB2-213ENST00000497591 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
EFCAB2-213ENST00000497591 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
EFCAB2-213ENST00000497591 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
EFCAB2-213ENST00000497591 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
EFCAB2-213ENST00000497591 WIZO95785 1651 aa22.46■■□□□ 1.19
EFCAB2-213ENST00000497591 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
EFCAB2-213ENST00000497591 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
EFCAB2-213ENST00000497591 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
EFCAB2-213ENST00000497591 WDR62O43379 1518 aa22.25■■□□□ 1.15
EFCAB2-213ENST00000497591 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
EFCAB2-213ENST00000497591 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
EFCAB2-213ENST00000497591 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
EFCAB2-213ENST00000497591 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
EFCAB2-213ENST00000497591 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
EFCAB2-213ENST00000497591 CFTRP13569 1480 aa22.09■■□□□ 1.13
EFCAB2-213ENST00000497591 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
EFCAB2-213ENST00000497591 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
EFCAB2-213ENST00000497591 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
EFCAB2-213ENST00000497591 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
EFCAB2-213ENST00000497591 IFT140Q96RY7 1462 aa21.73■■□□□ 1.07
EFCAB2-213ENST00000497591 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
EFCAB2-213ENST00000497591 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
EFCAB2-213ENST00000497591 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
EFCAB2-213ENST00000497591 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
EFCAB2-213ENST00000497591 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
EFCAB2-213ENST00000497591 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
EFCAB2-213ENST00000497591 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
EFCAB2-213ENST00000497591 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
EFCAB2-213ENST00000497591 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
EFCAB2-213ENST00000497591 CHD1O14646 1710 aa21.55■■□□□ 1.04
EFCAB2-213ENST00000497591 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
EFCAB2-213ENST00000497591 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
EFCAB2-213ENST00000497591 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
EFCAB2-213ENST00000497591 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.026e-6■■■■□ 25.1
EFCAB2-213ENST00000497591 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
EFCAB2-213ENST00000497591 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
EFCAB2-213ENST00000497591 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
EFCAB2-213ENST00000497591 SOGA1O94964 1423 aa21.35■■□□□ 1.01
EFCAB2-213ENST00000497591 FBLN2P98095 1184 aa21.32■■□□□ 1
EFCAB2-213ENST00000497591 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
EFCAB2-213ENST00000497591 CUX1P39880 1505 aa21.29■■□□□ 1
EFCAB2-213ENST00000497591 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
EFCAB2-213ENST00000497591 PBRM1Q86U86 1689 aa21.28■■□□□ 1
EFCAB2-213ENST00000497591 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
EFCAB2-213ENST00000497591 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
EFCAB2-213ENST00000497591 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
EFCAB2-213ENST00000497591 ARAP1Q96P48 1450 aa21.22■□□□□ 0.99
EFCAB2-213ENST00000497591 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
EFCAB2-213ENST00000497591 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
EFCAB2-213ENST00000497591 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
EFCAB2-213ENST00000497591 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
EFCAB2-213ENST00000497591 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
EFCAB2-213ENST00000497591 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
EFCAB2-213ENST00000497591 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
EFCAB2-213ENST00000497591 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
EFCAB2-213ENST00000497591 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
EFCAB2-213ENST00000497591 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
EFCAB2-213ENST00000497591 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
EFCAB2-213ENST00000497591 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
EFCAB2-213ENST00000497591 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
EFCAB2-213ENST00000497591 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
EFCAB2-213ENST00000497591 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
EFCAB2-213ENST00000497591 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
EFCAB2-213ENST00000497591 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
EFCAB2-213ENST00000497591 NUP160Q12769 1436 aa20.84■□□□□ 0.93
EFCAB2-213ENST00000497591 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
EFCAB2-213ENST00000497591 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
EFCAB2-213ENST00000497591 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
EFCAB2-213ENST00000497591 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
EFCAB2-213ENST00000497591 CUL7Q14999 1698 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms