RNA–Protein interactions for RNA: ENST00000509411.5

FBXO38-215, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-215ENST00000509411 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
FBXO38-215ENST00000509411 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
FBXO38-215ENST00000509411 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
FBXO38-215ENST00000509411 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
FBXO38-215ENST00000509411 ABCC9O60706 1549 aa19.76■□□□□ 0.75
FBXO38-215ENST00000509411 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
FBXO38-215ENST00000509411 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
FBXO38-215ENST00000509411 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
FBXO38-215ENST00000509411 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
FBXO38-215ENST00000509411 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
FBXO38-215ENST00000509411 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
FBXO38-215ENST00000509411 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
FBXO38-215ENST00000509411 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
FBXO38-215ENST00000509411 NACADO15069 1562 aa18.74■□□□□ 0.59
FBXO38-215ENST00000509411 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
FBXO38-215ENST00000509411 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
FBXO38-215ENST00000509411 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
FBXO38-215ENST00000509411 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
FBXO38-215ENST00000509411 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
FBXO38-215ENST00000509411 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
FBXO38-215ENST00000509411 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
FBXO38-215ENST00000509411 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
FBXO38-215ENST00000509411 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
FBXO38-215ENST00000509411 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
FBXO38-215ENST00000509411 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
FBXO38-215ENST00000509411 FOXD1Q16676 465 aa17.8■□□□□ 0.44
FBXO38-215ENST00000509411 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
FBXO38-215ENST00000509411 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
FBXO38-215ENST00000509411 WIZO95785 1651 aa17.75■□□□□ 0.43
FBXO38-215ENST00000509411 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
FBXO38-215ENST00000509411 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
FBXO38-215ENST00000509411 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
FBXO38-215ENST00000509411 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
FBXO38-215ENST00000509411 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
FBXO38-215ENST00000509411 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
FBXO38-215ENST00000509411 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
FBXO38-215ENST00000509411 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
FBXO38-215ENST00000509411 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
FBXO38-215ENST00000509411 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
FBXO38-215ENST00000509411 CUX2O14529 1486 aa17.06■□□□□ 0.32
FBXO38-215ENST00000509411 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
FBXO38-215ENST00000509411 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
FBXO38-215ENST00000509411 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
FBXO38-215ENST00000509411 NESP48681 1621 aa16.96■□□□□ 0.31
FBXO38-215ENST00000509411 CFTRP13569 1480 aa16.92■□□□□ 0.3
FBXO38-215ENST00000509411 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
FBXO38-215ENST00000509411 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
FBXO38-215ENST00000509411 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
FBXO38-215ENST00000509411 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
FBXO38-215ENST00000509411 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
FBXO38-215ENST00000509411 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
FBXO38-215ENST00000509411 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
FBXO38-215ENST00000509411 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
FBXO38-215ENST00000509411 MSH5O43196 834 aa16.77■□□□□ 0.28
FBXO38-215ENST00000509411 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
FBXO38-215ENST00000509411 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
FBXO38-215ENST00000509411 CUX1P39880 1505 aa16.72■□□□□ 0.27
FBXO38-215ENST00000509411 SOGA1O94964 1423 aa16.7■□□□□ 0.26
FBXO38-215ENST00000509411 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
FBXO38-215ENST00000509411 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
FBXO38-215ENST00000509411 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
FBXO38-215ENST00000509411 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
FBXO38-215ENST00000509411 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
FBXO38-215ENST00000509411 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
FBXO38-215ENST00000509411 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
FBXO38-215ENST00000509411 ADRA2BP18089 450 aa16.6■□□□□ 0.25
FBXO38-215ENST00000509411 WDR62O43379 1518 aa16.6■□□□□ 0.25
FBXO38-215ENST00000509411 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
FBXO38-215ENST00000509411 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
FBXO38-215ENST00000509411 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
FBXO38-215ENST00000509411 EEA1Q15075 1411 aa16.52■□□□□ 0.23
FBXO38-215ENST00000509411 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
FBXO38-215ENST00000509411 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
FBXO38-215ENST00000509411 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
FBXO38-215ENST00000509411 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
FBXO38-215ENST00000509411 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
FBXO38-215ENST00000509411 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
FBXO38-215ENST00000509411 KIF21BO75037 1637 aa16.37■□□□□ 0.21
FBXO38-215ENST00000509411 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
FBXO38-215ENST00000509411 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
FBXO38-215ENST00000509411 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
FBXO38-215ENST00000509411 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
FBXO38-215ENST00000509411 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
FBXO38-215ENST00000509411 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
FBXO38-215ENST00000509411 IGF1RP08069 1367 aa16.31■□□□□ 0.2
FBXO38-215ENST00000509411 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
FBXO38-215ENST00000509411 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
FBXO38-215ENST00000509411 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
FBXO38-215ENST00000509411 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
FBXO38-215ENST00000509411 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
FBXO38-215ENST00000509411 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
FBXO38-215ENST00000509411 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
FBXO38-215ENST00000509411 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
FBXO38-215ENST00000509411 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
FBXO38-215ENST00000509411 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
FBXO38-215ENST00000509411 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
FBXO38-215ENST00000509411 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
FBXO38-215ENST00000509411 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.171e-10■■□□□ 13.1
FBXO38-215ENST00000509411 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
FBXO38-215ENST00000509411 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms