RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
EFCAB2-202ENST00000366522 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
EFCAB2-202ENST00000366522 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
EFCAB2-202ENST00000366522 MYT1Q01538 1121 aa23.73■■□□□ 1.39
EFCAB2-202ENST00000366522 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
EFCAB2-202ENST00000366522 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
EFCAB2-202ENST00000366522 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
EFCAB2-202ENST00000366522 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
EFCAB2-202ENST00000366522 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
EFCAB2-202ENST00000366522 APLP2Q06481 763 aa22.94■■□□□ 1.26
EFCAB2-202ENST00000366522 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
EFCAB2-202ENST00000366522 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
EFCAB2-202ENST00000366522 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
EFCAB2-202ENST00000366522 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
EFCAB2-202ENST00000366522 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
EFCAB2-202ENST00000366522 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
EFCAB2-202ENST00000366522 NEFLP07196 543 aa22.22■■□□□ 1.15
EFCAB2-202ENST00000366522 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
EFCAB2-202ENST00000366522 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
EFCAB2-202ENST00000366522 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
EFCAB2-202ENST00000366522 DAXXQ9UER7 740 aaPredicted RBP21.86■■□□□ 1.09
EFCAB2-202ENST00000366522 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
EFCAB2-202ENST00000366522 TRIM41Q8WV44 630 aa21.64■■□□□ 1.06
EFCAB2-202ENST00000366522 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
EFCAB2-202ENST00000366522 RTL5Q5HYW3 569 aaPredicted RBP21.59■■□□□ 1.05
EFCAB2-202ENST00000366522 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
EFCAB2-202ENST00000366522 HRCP23327 699 aa21.43■■□□□ 1.02
EFCAB2-202ENST00000366522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
EFCAB2-202ENST00000366522 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
EFCAB2-202ENST00000366522 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
EFCAB2-202ENST00000366522 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
EFCAB2-202ENST00000366522 ITGAEP38570 1179 aa21.31■■□□□ 1
EFCAB2-202ENST00000366522 TRIM26Q12899 539 aaPredicted RBP21.27■■□□□ 1
EFCAB2-202ENST00000366522 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
EFCAB2-202ENST00000366522 LOC105371045A0A1W2PR82 267 aa21.18■□□□□ 0.98
EFCAB2-202ENST00000366522 SLC4A1APQ9BWU0 796 aaKnown RBP21.17■□□□□ 0.98
EFCAB2-202ENST00000366522 BCANQ96GW7 911 aa21.09■□□□□ 0.97
EFCAB2-202ENST00000366522 GLIPR1L2Q4G1C9 344 aa21.03■□□□□ 0.96
EFCAB2-202ENST00000366522 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
EFCAB2-202ENST00000366522 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
EFCAB2-202ENST00000366522 CLSPNQ9HAW4 1339 aa20.87■□□□□ 0.93
EFCAB2-202ENST00000366522 EIF5BO60841 1220 aaKnown RBP20.78■□□□□ 0.92
EFCAB2-202ENST00000366522 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
EFCAB2-202ENST00000366522 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
EFCAB2-202ENST00000366522 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
EFCAB2-202ENST00000366522 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
EFCAB2-202ENST00000366522 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
EFCAB2-202ENST00000366522 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
EFCAB2-202ENST00000366522 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
EFCAB2-202ENST00000366522 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
EFCAB2-202ENST00000366522 ANP32BQ92688 251 aaKnown RBP20.47■□□□□ 0.87
EFCAB2-202ENST00000366522 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
EFCAB2-202ENST00000366522 NEFMP07197 916 aa20.38■□□□□ 0.85
EFCAB2-202ENST00000366522 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
EFCAB2-202ENST00000366522 FBLN2P98095 1184 aa20.34■□□□□ 0.85
EFCAB2-202ENST00000366522 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
EFCAB2-202ENST00000366522 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
EFCAB2-202ENST00000366522 ANP32CO43423 234 aa20.28■□□□□ 0.84
EFCAB2-202ENST00000366522 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
EFCAB2-202ENST00000366522 NBR1Q14596 966 aa20.15■□□□□ 0.82
EFCAB2-202ENST00000366522 FKBP8Q14318 412 aa20.14■□□□□ 0.81
EFCAB2-202ENST00000366522 ARXQ96QS3 562 aa20.12■□□□□ 0.81
EFCAB2-202ENST00000366522 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
EFCAB2-202ENST00000366522 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
EFCAB2-202ENST00000366522 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
EFCAB2-202ENST00000366522 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
EFCAB2-202ENST00000366522 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
EFCAB2-202ENST00000366522 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
EFCAB2-202ENST00000366522 HSP90AA1P07900 732 aaKnown RBP19.94■□□□□ 0.78
EFCAB2-202ENST00000366522 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
EFCAB2-202ENST00000366522 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
EFCAB2-202ENST00000366522 UPF2Q9HAU5 1272 aaKnown RBP19.92■□□□□ 0.78
EFCAB2-202ENST00000366522 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
EFCAB2-202ENST00000366522 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
EFCAB2-202ENST00000366522 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.77
EFCAB2-202ENST00000366522 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
EFCAB2-202ENST00000366522 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
EFCAB2-202ENST00000366522 ABCC9O60706 1549 aa19.82■□□□□ 0.76
EFCAB2-202ENST00000366522 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
EFCAB2-202ENST00000366522 CDK11BP21127 795 aaKnown RBP19.82■□□□□ 0.76
EFCAB2-202ENST00000366522 TRIM44Q96DX7 344 aaPredicted RBP19.8■□□□□ 0.76
EFCAB2-202ENST00000366522 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.76
EFCAB2-202ENST00000366522 RTN4Q9NQC3 1192 aaKnown RBP19.77■□□□□ 0.75
EFCAB2-202ENST00000366522 A0A0G2JS52 829 aa19.73■□□□□ 0.75
EFCAB2-202ENST00000366522 ANP32EQ9BTT0 268 aa19.72■□□□□ 0.75
EFCAB2-202ENST00000366522 SENP3-EIF4A1A0A087X0R7 540 aa19.69■□□□□ 0.74
EFCAB2-202ENST00000366522 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
EFCAB2-202ENST00000366522 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
EFCAB2-202ENST00000366522 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
EFCAB2-202ENST00000366522 CCDC136Q96JN2 1154 aa19.63■□□□□ 0.73
EFCAB2-202ENST00000366522 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
EFCAB2-202ENST00000366522 MIER1Q8N108 512 aa19.61■□□□□ 0.73
EFCAB2-202ENST00000366522 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
EFCAB2-202ENST00000366522 NAP1L5Q96NT1 182 aaPredicted RBP19.61■□□□□ 0.73
EFCAB2-202ENST00000366522 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
EFCAB2-202ENST00000366522 BECN1Q14457 450 aa19.5■□□□□ 0.71
EFCAB2-202ENST00000366522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.71
EFCAB2-202ENST00000366522 TPRNQ4KMQ1 711 aa19.47■□□□□ 0.71
EFCAB2-202ENST00000366522 DNTTIP2Q5QJE6 756 aaKnown RBP19.46■□□□□ 0.71
EFCAB2-202ENST00000366522 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms