RNA–Protein interactions for RNA: ENST00000448394.2

RANBP1-211, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-211ENST00000448394 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
RANBP1-211ENST00000448394 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
RANBP1-211ENST00000448394 ABCC9O60706 1549 aa30.51■■■□□ 2.47
RANBP1-211ENST00000448394 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
RANBP1-211ENST00000448394 NACADO15069 1562 aa29.39■■■□□ 2.3
RANBP1-211ENST00000448394 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
RANBP1-211ENST00000448394 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
RANBP1-211ENST00000448394 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
RANBP1-211ENST00000448394 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
RANBP1-211ENST00000448394 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
RANBP1-211ENST00000448394 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
RANBP1-211ENST00000448394 BICRAQ9NZM4 1560 aa28.49■■■□□ 2.15
RANBP1-211ENST00000448394 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
RANBP1-211ENST00000448394 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
RANBP1-211ENST00000448394 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
RANBP1-211ENST00000448394 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
RANBP1-211ENST00000448394 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
RANBP1-211ENST00000448394 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
RANBP1-211ENST00000448394 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
RANBP1-211ENST00000448394 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
RANBP1-211ENST00000448394 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
RANBP1-211ENST00000448394 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
RANBP1-211ENST00000448394 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
RANBP1-211ENST00000448394 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
RANBP1-211ENST00000448394 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
RANBP1-211ENST00000448394 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
RANBP1-211ENST00000448394 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
RANBP1-211ENST00000448394 WIZO95785 1651 aa26.82■■□□□ 1.88
RANBP1-211ENST00000448394 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
RANBP1-211ENST00000448394 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
RANBP1-211ENST00000448394 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
RANBP1-211ENST00000448394 NESP48681 1621 aa26.4■■□□□ 1.82
RANBP1-211ENST00000448394 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
RANBP1-211ENST00000448394 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
RANBP1-211ENST00000448394 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
RANBP1-211ENST00000448394 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
RANBP1-211ENST00000448394 CFTRP13569 1480 aa26.16■■□□□ 1.78
RANBP1-211ENST00000448394 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
RANBP1-211ENST00000448394 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
RANBP1-211ENST00000448394 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
RANBP1-211ENST00000448394 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
RANBP1-211ENST00000448394 CUX2O14529 1486 aa26.04■■□□□ 1.76
RANBP1-211ENST00000448394 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
RANBP1-211ENST00000448394 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
RANBP1-211ENST00000448394 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
RANBP1-211ENST00000448394 WDR62O43379 1518 aa25.87■■□□□ 1.73
RANBP1-211ENST00000448394 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
RANBP1-211ENST00000448394 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
RANBP1-211ENST00000448394 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
RANBP1-211ENST00000448394 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
RANBP1-211ENST00000448394 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
RANBP1-211ENST00000448394 CUX1P39880 1505 aa25.42■■□□□ 1.66
RANBP1-211ENST00000448394 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
RANBP1-211ENST00000448394 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
RANBP1-211ENST00000448394 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
RANBP1-211ENST00000448394 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.641e-6■■■■□ 24.5
RANBP1-211ENST00000448394 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
RANBP1-211ENST00000448394 SOGA1O94964 1423 aa25.26■■□□□ 1.63
RANBP1-211ENST00000448394 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
RANBP1-211ENST00000448394 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
RANBP1-211ENST00000448394 RAD54L2Q9Y4B4 1467 aa25.25■■□□□ 1.63
RANBP1-211ENST00000448394 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
RANBP1-211ENST00000448394 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
RANBP1-211ENST00000448394 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
RANBP1-211ENST00000448394 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.615e-9■■■■□ 20.2
RANBP1-211ENST00000448394 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
RANBP1-211ENST00000448394 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
RANBP1-211ENST00000448394 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
RANBP1-211ENST00000448394 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
RANBP1-211ENST00000448394 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
RANBP1-211ENST00000448394 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
RANBP1-211ENST00000448394 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
RANBP1-211ENST00000448394 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
RANBP1-211ENST00000448394 MAGI1Q96QZ7 1491 aaPredicted RBP24.94■■□□□ 1.58
RANBP1-211ENST00000448394 CHD1O14646 1710 aa24.92■■□□□ 1.58
RANBP1-211ENST00000448394 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
RANBP1-211ENST00000448394 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
RANBP1-211ENST00000448394 FBLN2P98095 1184 aa24.82■■□□□ 1.56
RANBP1-211ENST00000448394 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
RANBP1-211ENST00000448394 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
RANBP1-211ENST00000448394 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
RANBP1-211ENST00000448394 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
RANBP1-211ENST00000448394 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
RANBP1-211ENST00000448394 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
RANBP1-211ENST00000448394 GRIN2AQ12879 1464 aa24.68■■□□□ 1.54
RANBP1-211ENST00000448394 CUL7Q14999 1698 aa24.64■■□□□ 1.53
RANBP1-211ENST00000448394 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
RANBP1-211ENST00000448394 IGF1RP08069 1367 aa24.59■■□□□ 1.53
RANBP1-211ENST00000448394 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
RANBP1-211ENST00000448394 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
RANBP1-211ENST00000448394 NUP160Q12769 1436 aa24.55■■□□□ 1.52
RANBP1-211ENST00000448394 RIMBP3CA6NJZ7 1639 aa24.55■■□□□ 1.52
RANBP1-211ENST00000448394 RIMBP3BA6NNM3 1639 aa24.55■■□□□ 1.52
RANBP1-211ENST00000448394 RIMBP3Q9UFD9 1639 aa24.55■■□□□ 1.52
RANBP1-211ENST00000448394 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
RANBP1-211ENST00000448394 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
RANBP1-211ENST00000448394 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
RANBP1-211ENST00000448394 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
RANBP1-211ENST00000448394 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
RANBP1-211ENST00000448394 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms