RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
EFCAB2-215ENST00000549220 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
EFCAB2-215ENST00000549220 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
EFCAB2-215ENST00000549220 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
EFCAB2-215ENST00000549220 FOXD1Q16676 465 aa20.23■□□□□ 0.83
EFCAB2-215ENST00000549220 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
EFCAB2-215ENST00000549220 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
EFCAB2-215ENST00000549220 ADRA2BP18089 450 aa18.97■□□□□ 0.63
EFCAB2-215ENST00000549220 PIAS4Q8N2W9 510 aaPredicted RBP18.79■□□□□ 0.6
EFCAB2-215ENST00000549220 MSH5O43196 834 aa18.7■□□□□ 0.58
EFCAB2-215ENST00000549220 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
EFCAB2-215ENST00000549220 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
EFCAB2-215ENST00000549220 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
EFCAB2-215ENST00000549220 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
EFCAB2-215ENST00000549220 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
EFCAB2-215ENST00000549220 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
EFCAB2-215ENST00000549220 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
EFCAB2-215ENST00000549220 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
EFCAB2-215ENST00000549220 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
EFCAB2-215ENST00000549220 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
EFCAB2-215ENST00000549220 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
EFCAB2-215ENST00000549220 KCNA4P22459 653 aa16.12■□□□□ 0.17
EFCAB2-215ENST00000549220 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
EFCAB2-215ENST00000549220 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
EFCAB2-215ENST00000549220 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
EFCAB2-215ENST00000549220 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
EFCAB2-215ENST00000549220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
EFCAB2-215ENST00000549220 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
EFCAB2-215ENST00000549220 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
EFCAB2-215ENST00000549220 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
EFCAB2-215ENST00000549220 DSG3P32926 999 aa15.13■□□□□ 0.01
EFCAB2-215ENST00000549220 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
EFCAB2-215ENST00000549220 CAPN15O75808 1086 aa15.06■□□□□ 0
EFCAB2-215ENST00000549220 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
EFCAB2-215ENST00000549220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
EFCAB2-215ENST00000549220 ZBTB22O15209 634 aa14.94□□□□□ -0.02
EFCAB2-215ENST00000549220 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
EFCAB2-215ENST00000549220 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
EFCAB2-215ENST00000549220 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
EFCAB2-215ENST00000549220 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
EFCAB2-215ENST00000549220 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
EFCAB2-215ENST00000549220 APLP2Q06481 763 aa14.84□□□□□ -0.03
EFCAB2-215ENST00000549220 ABCB7O75027 752 aa14.8□□□□□ -0.04
EFCAB2-215ENST00000549220 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
EFCAB2-215ENST00000549220 POLA2Q14181 598 aa14.59□□□□□ -0.07
EFCAB2-215ENST00000549220 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
EFCAB2-215ENST00000549220 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
EFCAB2-215ENST00000549220 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
EFCAB2-215ENST00000549220 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
EFCAB2-215ENST00000549220 POTEHQ6S545 545 aa14.17□□□□□ -0.14
EFCAB2-215ENST00000549220 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
EFCAB2-215ENST00000549220 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
EFCAB2-215ENST00000549220 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
EFCAB2-215ENST00000549220 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
EFCAB2-215ENST00000549220 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.17
EFCAB2-215ENST00000549220 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
EFCAB2-215ENST00000549220 REM2Q8IYK8 340 aaPredicted RBP13.95□□□□□ -0.18
EFCAB2-215ENST00000549220 FBLN2P98095 1184 aa13.88□□□□□ -0.19
EFCAB2-215ENST00000549220 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
EFCAB2-215ENST00000549220 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
EFCAB2-215ENST00000549220 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
EFCAB2-215ENST00000549220 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
EFCAB2-215ENST00000549220 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
EFCAB2-215ENST00000549220 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
EFCAB2-215ENST00000549220 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
EFCAB2-215ENST00000549220 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
EFCAB2-215ENST00000549220 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
EFCAB2-215ENST00000549220 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
EFCAB2-215ENST00000549220 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
EFCAB2-215ENST00000549220 EVX2Q03828 476 aa13.4□□□□□ -0.26
EFCAB2-215ENST00000549220 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
EFCAB2-215ENST00000549220 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
EFCAB2-215ENST00000549220 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
EFCAB2-215ENST00000549220 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
EFCAB2-215ENST00000549220 HAX1O00165 279 aa13.28□□□□□ -0.28
EFCAB2-215ENST00000549220 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
EFCAB2-215ENST00000549220 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
EFCAB2-215ENST00000549220 PROM2Q8N271 834 aa13.26□□□□□ -0.29
EFCAB2-215ENST00000549220 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
EFCAB2-215ENST00000549220 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
EFCAB2-215ENST00000549220 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
EFCAB2-215ENST00000549220 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
EFCAB2-215ENST00000549220 GABBR2O75899 941 aa12.98□□□□□ -0.33
EFCAB2-215ENST00000549220 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
EFCAB2-215ENST00000549220 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
EFCAB2-215ENST00000549220 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
EFCAB2-215ENST00000549220 FKBP8Q14318 412 aa12.82□□□□□ -0.36
EFCAB2-215ENST00000549220 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
EFCAB2-215ENST00000549220 CLCN6P51797 869 aa12.71□□□□□ -0.37
EFCAB2-215ENST00000549220 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
EFCAB2-215ENST00000549220 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
EFCAB2-215ENST00000549220 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
EFCAB2-215ENST00000549220 MIER1Q8N108 512 aa12.63□□□□□ -0.39
EFCAB2-215ENST00000549220 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
EFCAB2-215ENST00000549220 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
EFCAB2-215ENST00000549220 NUBP1P53384 320 aa12.57□□□□□ -0.4
EFCAB2-215ENST00000549220 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
EFCAB2-215ENST00000549220 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
EFCAB2-215ENST00000549220 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
EFCAB2-215ENST00000549220 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms