RNA–Protein interactions for RNA: ENST00000265187.4

MCM8-201, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCM8, Length 3,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-201ENST00000265187 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
MCM8-201ENST00000265187 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
MCM8-201ENST00000265187 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
MCM8-201ENST00000265187 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
MCM8-201ENST00000265187 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.09
MCM8-201ENST00000265187 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
MCM8-201ENST00000265187 NACADO15069 1562 aa14.28□□□□□ -0.12
MCM8-201ENST00000265187 ABCC9O60706 1549 aa14.21□□□□□ -0.13
MCM8-201ENST00000265187 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
MCM8-201ENST00000265187 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
MCM8-201ENST00000265187 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
MCM8-201ENST00000265187 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
MCM8-201ENST00000265187 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
MCM8-201ENST00000265187 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
MCM8-201ENST00000265187 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
MCM8-201ENST00000265187 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
MCM8-201ENST00000265187 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
MCM8-201ENST00000265187 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
MCM8-201ENST00000265187 HMGXB3Q12766 1538 aa13.17□□□□□ -0.3
MCM8-201ENST00000265187 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
MCM8-201ENST00000265187 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
MCM8-201ENST00000265187 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
MCM8-201ENST00000265187 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
MCM8-201ENST00000265187 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
MCM8-201ENST00000265187 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
MCM8-201ENST00000265187 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
MCM8-201ENST00000265187 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
MCM8-201ENST00000265187 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
MCM8-201ENST00000265187 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
MCM8-201ENST00000265187 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
MCM8-201ENST00000265187 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
MCM8-201ENST00000265187 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
MCM8-201ENST00000265187 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
MCM8-201ENST00000265187 CUX2O14529 1486 aa12.71□□□□□ -0.37
MCM8-201ENST00000265187 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
MCM8-201ENST00000265187 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
MCM8-201ENST00000265187 WIZO95785 1651 aa12.66□□□□□ -0.38
MCM8-201ENST00000265187 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
MCM8-201ENST00000265187 WDR62O43379 1518 aa12.58□□□□□ -0.4
MCM8-201ENST00000265187 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
MCM8-201ENST00000265187 CFTRP13569 1480 aa12.55□□□□□ -0.4
MCM8-201ENST00000265187 WDR97A6NE52 1622 aa12.52□□□□□ -0.41
MCM8-201ENST00000265187 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
MCM8-201ENST00000265187 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
MCM8-201ENST00000265187 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
MCM8-201ENST00000265187 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
MCM8-201ENST00000265187 NESP48681 1621 aa12.37□□□□□ -0.43
MCM8-201ENST00000265187 ABCC8Q09428 1581 aa12.34□□□□□ -0.43
MCM8-201ENST00000265187 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
MCM8-201ENST00000265187 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
MCM8-201ENST00000265187 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
MCM8-201ENST00000265187 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
MCM8-201ENST00000265187 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
MCM8-201ENST00000265187 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
MCM8-201ENST00000265187 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
MCM8-201ENST00000265187 ERCC6Q03468 1493 aa12.24□□□□□ -0.45
MCM8-201ENST00000265187 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
MCM8-201ENST00000265187 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
MCM8-201ENST00000265187 ADRA2BP18089 450 aa12.13□□□□□ -0.47
MCM8-201ENST00000265187 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
MCM8-201ENST00000265187 TOP2BQ02880 1626 aa12.1□□□□□ -0.47
MCM8-201ENST00000265187 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
MCM8-201ENST00000265187 CUX1P39880 1505 aa12.07□□□□□ -0.48
MCM8-201ENST00000265187 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
MCM8-201ENST00000265187 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
MCM8-201ENST00000265187 KCNA4P22459 653 aa12.05□□□□□ -0.48
MCM8-201ENST00000265187 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
MCM8-201ENST00000265187 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
MCM8-201ENST00000265187 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
MCM8-201ENST00000265187 CHD1O14646 1710 aa11.98□□□□□ -0.49
MCM8-201ENST00000265187 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
MCM8-201ENST00000265187 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.49
MCM8-201ENST00000265187 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
MCM8-201ENST00000265187 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
MCM8-201ENST00000265187 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
MCM8-201ENST00000265187 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
MCM8-201ENST00000265187 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
MCM8-201ENST00000265187 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
MCM8-201ENST00000265187 ZNF608Q9ULD9 1512 aaPredicted RBP11.88□□□□□ -0.51
MCM8-201ENST00000265187 CUL7Q14999 1698 aa11.87□□□□□ -0.51
MCM8-201ENST00000265187 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
MCM8-201ENST00000265187 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
MCM8-201ENST00000265187 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
MCM8-201ENST00000265187 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
MCM8-201ENST00000265187 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
MCM8-201ENST00000265187 NUP160Q12769 1436 aa11.8□□□□□ -0.52
MCM8-201ENST00000265187 SOGA1O94964 1423 aa11.79□□□□□ -0.52
MCM8-201ENST00000265187 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.53
MCM8-201ENST00000265187 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
MCM8-201ENST00000265187 GAPVD1Q14C86 1478 aa11.75□□□□□ -0.53
MCM8-201ENST00000265187 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
MCM8-201ENST00000265187 RAD54L2Q9Y4B4 1467 aa11.75□□□□□ -0.53
MCM8-201ENST00000265187 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
MCM8-201ENST00000265187 ARHGEF11O15085 1522 aa11.71□□□□□ -0.53
MCM8-201ENST00000265187 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
MCM8-201ENST00000265187 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.54
MCM8-201ENST00000265187 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
MCM8-201ENST00000265187 AQRO60306 1485 aaKnown RBP eCLIP11.68□□□□□ -0.544e-6■■■□□ 19.1
MCM8-201ENST00000265187 FOXD1Q16676 465 aa11.64□□□□□ -0.55
MCM8-201ENST00000265187 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms