RNA–Protein interactions for RNA: ENST00000296701.10

FBXO38-201, Transcript of F-box protein 38, humanhuman

TSL 2 BASIC

Gene FBXO38, Length 3,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-201ENST00000296701 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
FBXO38-201ENST00000296701 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
FBXO38-201ENST00000296701 ABCC9O60706 1549 aa16.95■□□□□ 0.3
FBXO38-201ENST00000296701 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.27
FBXO38-201ENST00000296701 MYO15BQ96JP2 1530 aa16.71■□□□□ 0.27
FBXO38-201ENST00000296701 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
FBXO38-201ENST00000296701 NACADO15069 1562 aa16.63■□□□□ 0.25
FBXO38-201ENST00000296701 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
FBXO38-201ENST00000296701 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
FBXO38-201ENST00000296701 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
FBXO38-201ENST00000296701 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
FBXO38-201ENST00000296701 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
FBXO38-201ENST00000296701 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
FBXO38-201ENST00000296701 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
FBXO38-201ENST00000296701 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
FBXO38-201ENST00000296701 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
FBXO38-201ENST00000296701 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
FBXO38-201ENST00000296701 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
FBXO38-201ENST00000296701 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
FBXO38-201ENST00000296701 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
FBXO38-201ENST00000296701 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
FBXO38-201ENST00000296701 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
FBXO38-201ENST00000296701 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
FBXO38-201ENST00000296701 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
FBXO38-201ENST00000296701 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
FBXO38-201ENST00000296701 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
FBXO38-201ENST00000296701 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
FBXO38-201ENST00000296701 WIZO95785 1651 aa15.29■□□□□ 0.04
FBXO38-201ENST00000296701 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
FBXO38-201ENST00000296701 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
FBXO38-201ENST00000296701 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
FBXO38-201ENST00000296701 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
FBXO38-201ENST00000296701 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
FBXO38-201ENST00000296701 CFTRP13569 1480 aa14.83□□□□□ -0.03
FBXO38-201ENST00000296701 NESP48681 1621 aa14.8□□□□□ -0.04
FBXO38-201ENST00000296701 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
FBXO38-201ENST00000296701 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
FBXO38-201ENST00000296701 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
FBXO38-201ENST00000296701 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
FBXO38-201ENST00000296701 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
FBXO38-201ENST00000296701 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
FBXO38-201ENST00000296701 WDR62O43379 1518 aa14.59□□□□□ -0.07
FBXO38-201ENST00000296701 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
FBXO38-201ENST00000296701 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
FBXO38-201ENST00000296701 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
FBXO38-201ENST00000296701 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
FBXO38-201ENST00000296701 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
FBXO38-201ENST00000296701 CUX2O14529 1486 aa14.49□□□□□ -0.09
FBXO38-201ENST00000296701 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
FBXO38-201ENST00000296701 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
FBXO38-201ENST00000296701 CUX1P39880 1505 aa14.46□□□□□ -0.09
FBXO38-201ENST00000296701 TOPBP1Q92547 1522 aa14.46□□□□□ -0.09
FBXO38-201ENST00000296701 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
FBXO38-201ENST00000296701 SYNJ1O43426 1573 aa14.41□□□□□ -0.1
FBXO38-201ENST00000296701 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
FBXO38-201ENST00000296701 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
FBXO38-201ENST00000296701 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
FBXO38-201ENST00000296701 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
FBXO38-201ENST00000296701 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
FBXO38-201ENST00000296701 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
FBXO38-201ENST00000296701 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
FBXO38-201ENST00000296701 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
FBXO38-201ENST00000296701 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
FBXO38-201ENST00000296701 RAD54L2Q9Y4B4 1467 aa14.22□□□□□ -0.13
FBXO38-201ENST00000296701 SOGA1O94964 1423 aa14.21□□□□□ -0.13
FBXO38-201ENST00000296701 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
FBXO38-201ENST00000296701 PBRM1Q86U86 1689 aa14.19□□□□□ -0.14
FBXO38-201ENST00000296701 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
FBXO38-201ENST00000296701 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.151e-10■■■■■ 31
FBXO38-201ENST00000296701 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
FBXO38-201ENST00000296701 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
FBXO38-201ENST00000296701 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
FBXO38-201ENST00000296701 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
FBXO38-201ENST00000296701 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
FBXO38-201ENST00000296701 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
FBXO38-201ENST00000296701 CHD1O14646 1710 aa14.03□□□□□ -0.16
FBXO38-201ENST00000296701 CUL7Q14999 1698 aa14.03□□□□□ -0.16
FBXO38-201ENST00000296701 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
FBXO38-201ENST00000296701 RUSC2Q8N2Y8 1516 aa14□□□□□ -0.17
FBXO38-201ENST00000296701 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
FBXO38-201ENST00000296701 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
FBXO38-201ENST00000296701 IGF1RP08069 1367 aa13.98□□□□□ -0.17
FBXO38-201ENST00000296701 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
FBXO38-201ENST00000296701 FHAD1B1AJZ9 1412 aa13.94□□□□□ -0.18
FBXO38-201ENST00000296701 EEA1Q15075 1411 aa13.94□□□□□ -0.18
FBXO38-201ENST00000296701 CLASP1Q7Z460 1538 aa13.91□□□□□ -0.18
FBXO38-201ENST00000296701 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
FBXO38-201ENST00000296701 GRIN2AQ12879 1464 aa13.91□□□□□ -0.18
FBXO38-201ENST00000296701 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
FBXO38-201ENST00000296701 NUP160Q12769 1436 aa13.88□□□□□ -0.19
FBXO38-201ENST00000296701 KIF21BO75037 1637 aa13.88□□□□□ -0.19
FBXO38-201ENST00000296701 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
FBXO38-201ENST00000296701 CTTNBP2Q8WZ74 1663 aa13.84□□□□□ -0.19
FBXO38-201ENST00000296701 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
FBXO38-201ENST00000296701 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.2
FBXO38-201ENST00000296701 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
FBXO38-201ENST00000296701 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
FBXO38-201ENST00000296701 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
FBXO38-201ENST00000296701 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
FBXO38-201ENST00000296701 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms