RNA–Protein interactions for RNA: ENST00000260385.10

RMDN3-201, Transcript of regulator of microtubule dynamics 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RMDN3, Length 3,138 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-201ENST00000260385 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
RMDN3-201ENST00000260385 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
RMDN3-201ENST00000260385 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
RMDN3-201ENST00000260385 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
RMDN3-201ENST00000260385 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
RMDN3-201ENST00000260385 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
RMDN3-201ENST00000260385 ABCC9O60706 1549 aa24.84■■□□□ 1.57
RMDN3-201ENST00000260385 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
RMDN3-201ENST00000260385 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
RMDN3-201ENST00000260385 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
RMDN3-201ENST00000260385 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.46
RMDN3-201ENST00000260385 NACADO15069 1562 aa23.89■■□□□ 1.42
RMDN3-201ENST00000260385 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
RMDN3-201ENST00000260385 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
RMDN3-201ENST00000260385 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
RMDN3-201ENST00000260385 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
RMDN3-201ENST00000260385 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
RMDN3-201ENST00000260385 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
RMDN3-201ENST00000260385 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.39
RMDN3-201ENST00000260385 HRCP23327 699 aa23.68■■□□□ 1.38
RMDN3-201ENST00000260385 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
RMDN3-201ENST00000260385 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
RMDN3-201ENST00000260385 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
RMDN3-201ENST00000260385 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
RMDN3-201ENST00000260385 WIZO95785 1651 aa23.36■■□□□ 1.33
RMDN3-201ENST00000260385 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
RMDN3-201ENST00000260385 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.29
RMDN3-201ENST00000260385 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
RMDN3-201ENST00000260385 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
RMDN3-201ENST00000260385 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
RMDN3-201ENST00000260385 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
RMDN3-201ENST00000260385 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
RMDN3-201ENST00000260385 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
RMDN3-201ENST00000260385 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
RMDN3-201ENST00000260385 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
RMDN3-201ENST00000260385 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
RMDN3-201ENST00000260385 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
RMDN3-201ENST00000260385 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
RMDN3-201ENST00000260385 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.22
RMDN3-201ENST00000260385 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
RMDN3-201ENST00000260385 SOGA1O94964 1423 aa22.49■■□□□ 1.19
RMDN3-201ENST00000260385 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
RMDN3-201ENST00000260385 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
RMDN3-201ENST00000260385 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
RMDN3-201ENST00000260385 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
RMDN3-201ENST00000260385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
RMDN3-201ENST00000260385 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
RMDN3-201ENST00000260385 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
RMDN3-201ENST00000260385 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
RMDN3-201ENST00000260385 CCER1Q8TC90 406 aaPredicted RBP22.23■■□□□ 1.15
RMDN3-201ENST00000260385 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
RMDN3-201ENST00000260385 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
RMDN3-201ENST00000260385 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
RMDN3-201ENST00000260385 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
RMDN3-201ENST00000260385 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
RMDN3-201ENST00000260385 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
RMDN3-201ENST00000260385 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
RMDN3-201ENST00000260385 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
RMDN3-201ENST00000260385 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.12
RMDN3-201ENST00000260385 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
RMDN3-201ENST00000260385 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
RMDN3-201ENST00000260385 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
RMDN3-201ENST00000260385 CFTRP13569 1480 aa21.92■■□□□ 1.1
RMDN3-201ENST00000260385 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
RMDN3-201ENST00000260385 GOLGA3Q08378 1498 aa21.91■■□□□ 1.1
RMDN3-201ENST00000260385 EEA1Q15075 1411 aa21.9■■□□□ 1.1
RMDN3-201ENST00000260385 NESP48681 1621 aa21.9■■□□□ 1.1
RMDN3-201ENST00000260385 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
RMDN3-201ENST00000260385 CUX1P39880 1505 aa21.88■■□□□ 1.09
RMDN3-201ENST00000260385 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
RMDN3-201ENST00000260385 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
RMDN3-201ENST00000260385 APLP2Q06481 763 aa21.79■■□□□ 1.08
RMDN3-201ENST00000260385 CLIP1P30622 1438 aa21.78■■□□□ 1.08
RMDN3-201ENST00000260385 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
RMDN3-201ENST00000260385 CUX2O14529 1486 aa21.73■■□□□ 1.07
RMDN3-201ENST00000260385 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
RMDN3-201ENST00000260385 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
RMDN3-201ENST00000260385 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
RMDN3-201ENST00000260385 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
RMDN3-201ENST00000260385 ATP1B4Q9UN42 357 aaPredicted RBP21.67■■□□□ 1.06
RMDN3-201ENST00000260385 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
RMDN3-201ENST00000260385 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
RMDN3-201ENST00000260385 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
RMDN3-201ENST00000260385 MYT1Q01538 1121 aa21.64■■□□□ 1.06
RMDN3-201ENST00000260385 KIF21BO75037 1637 aa21.59■■□□□ 1.05
RMDN3-201ENST00000260385 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
RMDN3-201ENST00000260385 IGF1RP08069 1367 aa21.55■■□□□ 1.04
RMDN3-201ENST00000260385 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
RMDN3-201ENST00000260385 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
RMDN3-201ENST00000260385 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
RMDN3-201ENST00000260385 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
RMDN3-201ENST00000260385 ITGAEP38570 1179 aa21.49■■□□□ 1.03
RMDN3-201ENST00000260385 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
RMDN3-201ENST00000260385 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
RMDN3-201ENST00000260385 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
RMDN3-201ENST00000260385 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
RMDN3-201ENST00000260385 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
RMDN3-201ENST00000260385 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
RMDN3-201ENST00000260385 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
RMDN3-201ENST00000260385 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms