RNA–Protein interactions for RNA: ENST00000543678.1

MTFMT-202, Transcript of mitochondrial methionyl-tRNA formyltransferase, humanhuman

TSL 2

Gene MTFMT, Length 1,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTFMT-202ENST00000543678 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
MTFMT-202ENST00000543678 CCDC180Q9P1Z9 1646 aa42.84■■■■■ 4.45
MTFMT-202ENST00000543678 ABCC9O60706 1549 aa42.44■■■■■ 4.38
MTFMT-202ENST00000543678 RB1CC1Q8TDY2 1594 aa40.53■■■■■ 4.08
MTFMT-202ENST00000543678 NACADO15069 1562 aa40.3■■■■■ 4.04
MTFMT-202ENST00000543678 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
MTFMT-202ENST00000543678 UNC13AQ9UPW8 1703 aa39.88■■■■□ 3.98
MTFMT-202ENST00000543678 MYO15BQ96JP2 1530 aa39.81■■■■□ 3.96
MTFMT-202ENST00000543678 ZCCHC6Q5VYS8 1495 aaKnown RBP39.71■■■■□ 3.95
MTFMT-202ENST00000543678 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
MTFMT-202ENST00000543678 DNAJC5BQ9UF47 199 aa39.46■■■■□ 3.91
MTFMT-202ENST00000543678 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
MTFMT-202ENST00000543678 BICRAQ9NZM4 1560 aa39.42■■■■□ 3.9
MTFMT-202ENST00000543678 SCRIBQ14160 1630 aa39.09■■■■□ 3.85
MTFMT-202ENST00000543678 SHROOM4Q9ULL8 1493 aa38.76■■■■□ 3.8
MTFMT-202ENST00000543678 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
MTFMT-202ENST00000543678 EIF4G1Q04637 1599 aaKnown RBP38.38■■■■□ 3.73
MTFMT-202ENST00000543678 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
MTFMT-202ENST00000543678 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
MTFMT-202ENST00000543678 NCAPD3P42695 1498 aa37.14■■■■□ 3.54
MTFMT-202ENST00000543678 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.54
MTFMT-202ENST00000543678 BAZ1AQ9NRL2 1556 aaPredicted RBP37.07■■■■□ 3.52
MTFMT-202ENST00000543678 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
MTFMT-202ENST00000543678 HMGXB3Q12766 1538 aa37■■■■□ 3.51
MTFMT-202ENST00000543678 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
MTFMT-202ENST00000543678 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
MTFMT-202ENST00000543678 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
MTFMT-202ENST00000543678 NESP48681 1621 aa36.59■■■■□ 3.45
MTFMT-202ENST00000543678 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
MTFMT-202ENST00000543678 WIZO95785 1651 aa36.53■■■■□ 3.44
MTFMT-202ENST00000543678 CUX2O14529 1486 aa36.37■■■■□ 3.41
MTFMT-202ENST00000543678 LAMC3Q9Y6N6 1575 aa36.35■■■■□ 3.41
MTFMT-202ENST00000543678 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
MTFMT-202ENST00000543678 THOC2Q8NI27 1593 aaKnown RBP36.22■■■■□ 3.39
MTFMT-202ENST00000543678 RSF1Q96T23 1441 aaPredicted RBP36.16■■■■□ 3.38
MTFMT-202ENST00000543678 CADPSQ9ULU8 1353 aa36.02■■■■□ 3.36
MTFMT-202ENST00000543678 TOP2AP11388 1531 aaKnown RBP36.01■■■■□ 3.36
MTFMT-202ENST00000543678 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
MTFMT-202ENST00000543678 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
MTFMT-202ENST00000543678 MRC2Q9UBG0 1479 aa35.76■■■■□ 3.32
MTFMT-202ENST00000543678 CFTRP13569 1480 aa35.72■■■■□ 3.31
MTFMT-202ENST00000543678 WDR62O43379 1518 aa35.71■■■■□ 3.31
MTFMT-202ENST00000543678 CEP164Q9UPV0 1460 aa35.7■■■■□ 3.31
MTFMT-202ENST00000543678 FANCD2Q9BXW9 1451 aa35.68■■■■□ 3.3
MTFMT-202ENST00000543678 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
MTFMT-202ENST00000543678 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
MTFMT-202ENST00000543678 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
MTFMT-202ENST00000543678 TOPBP1Q92547 1522 aa35.08■■■■□ 3.21
MTFMT-202ENST00000543678 DNMBPQ6XZF7 1577 aa35■■■■□ 3.19
MTFMT-202ENST00000543678 ZNF608Q9ULD9 1512 aaPredicted RBP34.93■■■■□ 3.18
MTFMT-202ENST00000543678 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
MTFMT-202ENST00000543678 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
MTFMT-202ENST00000543678 EIF4G3O43432 1585 aaKnown RBP34.83■■■■□ 3.17
MTFMT-202ENST00000543678 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
MTFMT-202ENST00000543678 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
MTFMT-202ENST00000543678 POLA1P09884 1462 aaPredicted RBP34.73■■■■□ 3.15
MTFMT-202ENST00000543678 OSCARQ8IYS5 282 aa34.64■■■■□ 3.14
MTFMT-202ENST00000543678 CUX1P39880 1505 aa34.64■■■■□ 3.14
MTFMT-202ENST00000543678 RAD54L2Q9Y4B4 1467 aa34.61■■■■□ 3.13
MTFMT-202ENST00000543678 AQRO60306 1485 aaKnown RBP eCLIP34.6■■■■□ 3.13
MTFMT-202ENST00000543678 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
MTFMT-202ENST00000543678 CHD1O14646 1710 aa34.58■■■■□ 3.13
MTFMT-202ENST00000543678 SOGA1O94964 1423 aa34.51■■■■□ 3.12
MTFMT-202ENST00000543678 TRIM41Q8WV44 630 aa34.51■■■■□ 3.12
MTFMT-202ENST00000543678 WDR97A6NE52 1622 aa34.47■■■■□ 3.11
MTFMT-202ENST00000543678 RIMBP3CA6NJZ7 1639 aa34.42■■■■□ 3.1
MTFMT-202ENST00000543678 RIMBP3BA6NNM3 1639 aa34.42■■■■□ 3.1
MTFMT-202ENST00000543678 RIMBP3Q9UFD9 1639 aa34.42■■■■□ 3.1
MTFMT-202ENST00000543678 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
MTFMT-202ENST00000543678 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
MTFMT-202ENST00000543678 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
MTFMT-202ENST00000543678 ARHGEF11O15085 1522 aa34.27■■■■□ 3.08
MTFMT-202ENST00000543678 FBLN2P98095 1184 aa34.23■■■■□ 3.07
MTFMT-202ENST00000543678 BIVM-ERCC5R4GMW8 1640 aa34.22■■■■□ 3.07
MTFMT-202ENST00000543678 ABCA5Q8WWZ7 1642 aa34.2■■■■□ 3.07
MTFMT-202ENST00000543678 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
MTFMT-202ENST00000543678 GRIN2BQ13224 1484 aa34.19■■■■□ 3.06
MTFMT-202ENST00000543678 TOP2BQ02880 1626 aa34.17■■■■□ 3.06
MTFMT-202ENST00000543678 ABCA10Q8WWZ4 1543 aa34.17■■■■□ 3.06
MTFMT-202ENST00000543678 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
MTFMT-202ENST00000543678 GAPVD1Q14C86 1478 aa34.13■■■■□ 3.05
MTFMT-202ENST00000543678 WRNQ14191 1432 aaPredicted RBP eCLIP34.09■■■■□ 3.05
MTFMT-202ENST00000543678 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
MTFMT-202ENST00000543678 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
MTFMT-202ENST00000543678 CHMP7Q8WUX9 453 aaPredicted RBP33.99■■■■□ 3.03
MTFMT-202ENST00000543678 ARAP1Q96P48 1450 aa33.97■■■■□ 3.03
MTFMT-202ENST00000543678 ADAMTS12P58397 1594 aa33.91■■■■□ 3.02
MTFMT-202ENST00000543678 CYB5RLQ6IPT4 315 aa33.87■■■■□ 3.01
MTFMT-202ENST00000543678 GRIN2AQ12879 1464 aa33.8■■■■□ 3
MTFMT-202ENST00000543678 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
MTFMT-202ENST00000543678 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
MTFMT-202ENST00000543678 FHAD1B1AJZ9 1412 aa33.68■■■□□ 2.98
MTFMT-202ENST00000543678 NUP160Q12769 1436 aa33.64■■■□□ 2.98
MTFMT-202ENST00000543678 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
MTFMT-202ENST00000543678 SHROOM2Q13796 1616 aa33.57■■■□□ 2.96
MTFMT-202ENST00000543678 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
MTFMT-202ENST00000543678 CUL7Q14999 1698 aa33.41■■■□□ 2.94
MTFMT-202ENST00000543678 KIF27Q86VH2 1401 aa33.38■■■□□ 2.93
MTFMT-202ENST00000543678 TRHP20396 242 aaPredicted RBP33.37■■■□□ 2.93
MTFMT-202ENST00000543678 IGF1RP08069 1367 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms