RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
HNRNPU-226ENST00000640218 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
HNRNPU-226ENST00000640218 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
HNRNPU-226ENST00000640218 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
HNRNPU-226ENST00000640218 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
HNRNPU-226ENST00000640218 APLP2Q06481 763 aa23.17■■□□□ 1.3
HNRNPU-226ENST00000640218 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
HNRNPU-226ENST00000640218 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
HNRNPU-226ENST00000640218 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
HNRNPU-226ENST00000640218 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
HNRNPU-226ENST00000640218 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
HNRNPU-226ENST00000640218 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
HNRNPU-226ENST00000640218 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
HNRNPU-226ENST00000640218 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
HNRNPU-226ENST00000640218 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
HNRNPU-226ENST00000640218 CENPBP07199 599 aaPredicted RBP22.29■■□□□ 1.16
HNRNPU-226ENST00000640218 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
HNRNPU-226ENST00000640218 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
HNRNPU-226ENST00000640218 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
HNRNPU-226ENST00000640218 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
HNRNPU-226ENST00000640218 YTHDC1Q96MU7 727 aaKnown RBP21.97■■□□□ 1.11
HNRNPU-226ENST00000640218 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
HNRNPU-226ENST00000640218 NEFLP07196 543 aa21.93■■□□□ 1.1
HNRNPU-226ENST00000640218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
HNRNPU-226ENST00000640218 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
HNRNPU-226ENST00000640218 ITGAEP38570 1179 aa21.65■■□□□ 1.06
HNRNPU-226ENST00000640218 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
HNRNPU-226ENST00000640218 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
HNRNPU-226ENST00000640218 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
HNRNPU-226ENST00000640218 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
HNRNPU-226ENST00000640218 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
HNRNPU-226ENST00000640218 HRCP23327 699 aa21.35■■□□□ 1.01
HNRNPU-226ENST00000640218 SLC4A1APQ9BWU0 796 aaKnown RBP21.34■■□□□ 1.01
HNRNPU-226ENST00000640218 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
HNRNPU-226ENST00000640218 MYT1Q01538 1121 aa21.25■□□□□ 0.99
HNRNPU-226ENST00000640218 FBLN2P98095 1184 aa21.1■□□□□ 0.97
HNRNPU-226ENST00000640218 FAM50AQ14320 339 aaKnown RBP21.04■□□□□ 0.96
HNRNPU-226ENST00000640218 BCANQ96GW7 911 aa21■□□□□ 0.95
HNRNPU-226ENST00000640218 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
HNRNPU-226ENST00000640218 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
HNRNPU-226ENST00000640218 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
HNRNPU-226ENST00000640218 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
HNRNPU-226ENST00000640218 NEUROD1Q13562 356 aa20.88■□□□□ 0.93
HNRNPU-226ENST00000640218 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
HNRNPU-226ENST00000640218 SLC24A1O60721 1099 aa20.85■□□□□ 0.93
HNRNPU-226ENST00000640218 ABCC9O60706 1549 aa20.78■□□□□ 0.92
HNRNPU-226ENST00000640218 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
HNRNPU-226ENST00000640218 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
HNRNPU-226ENST00000640218 ANP32CO43423 234 aa20.62■□□□□ 0.89
HNRNPU-226ENST00000640218 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
HNRNPU-226ENST00000640218 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
HNRNPU-226ENST00000640218 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
HNRNPU-226ENST00000640218 P3H3Q8IVL6 736 aa20.5■□□□□ 0.87
HNRNPU-226ENST00000640218 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
HNRNPU-226ENST00000640218 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
HNRNPU-226ENST00000640218 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
HNRNPU-226ENST00000640218 A0A0G2JS52 829 aa20.45■□□□□ 0.86
HNRNPU-226ENST00000640218 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
HNRNPU-226ENST00000640218 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-226ENST00000640218 PLEKHG5O94827 1062 aa20.37■□□□□ 0.85
HNRNPU-226ENST00000640218 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
HNRNPU-226ENST00000640218 NEFMP07197 916 aa20.36■□□□□ 0.85
HNRNPU-226ENST00000640218 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
HNRNPU-226ENST00000640218 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
HNRNPU-226ENST00000640218 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
HNRNPU-226ENST00000640218 NPM1P06748 294 aaKnown RBP eCLIP20.23■□□□□ 0.83
HNRNPU-226ENST00000640218 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
HNRNPU-226ENST00000640218 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
HNRNPU-226ENST00000640218 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
HNRNPU-226ENST00000640218 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
HNRNPU-226ENST00000640218 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
HNRNPU-226ENST00000640218 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
HNRNPU-226ENST00000640218 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
HNRNPU-226ENST00000640218 FKBP8Q14318 412 aa19.99■□□□□ 0.79
HNRNPU-226ENST00000640218 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
HNRNPU-226ENST00000640218 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
HNRNPU-226ENST00000640218 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
HNRNPU-226ENST00000640218 HNRNPUQ00839 825 aaKnown RBP eCLIP19.97■□□□□ 0.79
HNRNPU-226ENST00000640218 DDX10Q13206 875 aaKnown RBP19.96■□□□□ 0.79
HNRNPU-226ENST00000640218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.787e-11■■□□□ 14
HNRNPU-226ENST00000640218 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
HNRNPU-226ENST00000640218 HSP90AA1P07900 732 aaKnown RBP19.93■□□□□ 0.78
HNRNPU-226ENST00000640218 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
HNRNPU-226ENST00000640218 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
HNRNPU-226ENST00000640218 HAP1P54257 671 aaPredicted RBP19.87■□□□□ 0.77
HNRNPU-226ENST00000640218 UPF2Q9HAU5 1272 aaKnown RBP19.86■□□□□ 0.77
HNRNPU-226ENST00000640218 ANP32BQ92688 251 aaKnown RBP19.84■□□□□ 0.77
HNRNPU-226ENST00000640218 TMC1Q8TDI8 760 aa19.84■□□□□ 0.77
HNRNPU-226ENST00000640218 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.76
HNRNPU-226ENST00000640218 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■□□□ 12.7
HNRNPU-226ENST00000640218 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
HNRNPU-226ENST00000640218 TSPY4P0CV99 314 aa19.76■□□□□ 0.75
HNRNPU-226ENST00000640218 TSPY10P0CW01 314 aa19.76■□□□□ 0.75
HNRNPU-226ENST00000640218 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
HNRNPU-226ENST00000640218 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.73■□□□□ 0.75
HNRNPU-226ENST00000640218 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
HNRNPU-226ENST00000640218 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
HNRNPU-226ENST00000640218 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
HNRNPU-226ENST00000640218 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
HNRNPU-226ENST00000640218 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms