RNA–Protein interactions for RNA: ENST00000473686.5

EFCAB2-208, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 5

Gene EFCAB2, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-208ENST00000473686 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
EFCAB2-208ENST00000473686 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
EFCAB2-208ENST00000473686 ABCC9O60706 1549 aa24.42■■□□□ 1.5
EFCAB2-208ENST00000473686 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
EFCAB2-208ENST00000473686 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
EFCAB2-208ENST00000473686 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
EFCAB2-208ENST00000473686 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
EFCAB2-208ENST00000473686 NACADO15069 1562 aa22.85■■□□□ 1.25
EFCAB2-208ENST00000473686 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
EFCAB2-208ENST00000473686 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
EFCAB2-208ENST00000473686 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
EFCAB2-208ENST00000473686 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
EFCAB2-208ENST00000473686 BICRAQ9NZM4 1560 aa22.41■■□□□ 1.18
EFCAB2-208ENST00000473686 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
EFCAB2-208ENST00000473686 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
EFCAB2-208ENST00000473686 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
EFCAB2-208ENST00000473686 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
EFCAB2-208ENST00000473686 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
EFCAB2-208ENST00000473686 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
EFCAB2-208ENST00000473686 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
EFCAB2-208ENST00000473686 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
EFCAB2-208ENST00000473686 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
EFCAB2-208ENST00000473686 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
EFCAB2-208ENST00000473686 DNAJC5Q9H3Z4 198 aa21.36■■□□□ 1.01
EFCAB2-208ENST00000473686 FOXD1Q16676 465 aa21.23■□□□□ 0.99
EFCAB2-208ENST00000473686 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
EFCAB2-208ENST00000473686 CUX2O14529 1486 aa21.14■□□□□ 0.98
EFCAB2-208ENST00000473686 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
EFCAB2-208ENST00000473686 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
EFCAB2-208ENST00000473686 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
EFCAB2-208ENST00000473686 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
EFCAB2-208ENST00000473686 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
EFCAB2-208ENST00000473686 NESP48681 1621 aa20.89■□□□□ 0.93
EFCAB2-208ENST00000473686 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
EFCAB2-208ENST00000473686 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
EFCAB2-208ENST00000473686 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
EFCAB2-208ENST00000473686 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
EFCAB2-208ENST00000473686 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
EFCAB2-208ENST00000473686 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
EFCAB2-208ENST00000473686 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
EFCAB2-208ENST00000473686 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
EFCAB2-208ENST00000473686 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
EFCAB2-208ENST00000473686 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
EFCAB2-208ENST00000473686 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
EFCAB2-208ENST00000473686 WDR62O43379 1518 aa20.38■□□□□ 0.85
EFCAB2-208ENST00000473686 WIZO95785 1651 aa20.38■□□□□ 0.85
EFCAB2-208ENST00000473686 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
EFCAB2-208ENST00000473686 MSH5O43196 834 aa20.29■□□□□ 0.84
EFCAB2-208ENST00000473686 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
EFCAB2-208ENST00000473686 CFTRP13569 1480 aa20.11■□□□□ 0.81
EFCAB2-208ENST00000473686 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
EFCAB2-208ENST00000473686 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
EFCAB2-208ENST00000473686 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
EFCAB2-208ENST00000473686 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
EFCAB2-208ENST00000473686 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
EFCAB2-208ENST00000473686 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
EFCAB2-208ENST00000473686 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
EFCAB2-208ENST00000473686 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
EFCAB2-208ENST00000473686 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
EFCAB2-208ENST00000473686 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
EFCAB2-208ENST00000473686 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
EFCAB2-208ENST00000473686 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
EFCAB2-208ENST00000473686 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
EFCAB2-208ENST00000473686 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
EFCAB2-208ENST00000473686 CHD1O14646 1710 aa19.78■□□□□ 0.76
EFCAB2-208ENST00000473686 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
EFCAB2-208ENST00000473686 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
EFCAB2-208ENST00000473686 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
EFCAB2-208ENST00000473686 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
EFCAB2-208ENST00000473686 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.736e-6■■■■□ 25.1
EFCAB2-208ENST00000473686 FBLN2P98095 1184 aa19.62■□□□□ 0.73
EFCAB2-208ENST00000473686 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
EFCAB2-208ENST00000473686 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
EFCAB2-208ENST00000473686 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
EFCAB2-208ENST00000473686 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
EFCAB2-208ENST00000473686 SNAPC4Q5SXM2 1469 aa19.49■□□□□ 0.71
EFCAB2-208ENST00000473686 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
EFCAB2-208ENST00000473686 SOGA1O94964 1423 aa19.46■□□□□ 0.71
EFCAB2-208ENST00000473686 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
EFCAB2-208ENST00000473686 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
EFCAB2-208ENST00000473686 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
EFCAB2-208ENST00000473686 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
EFCAB2-208ENST00000473686 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
EFCAB2-208ENST00000473686 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
EFCAB2-208ENST00000473686 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
EFCAB2-208ENST00000473686 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
EFCAB2-208ENST00000473686 CUX1P39880 1505 aa19.36■□□□□ 0.69
EFCAB2-208ENST00000473686 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
EFCAB2-208ENST00000473686 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
EFCAB2-208ENST00000473686 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
EFCAB2-208ENST00000473686 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
EFCAB2-208ENST00000473686 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
EFCAB2-208ENST00000473686 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
EFCAB2-208ENST00000473686 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
EFCAB2-208ENST00000473686 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
EFCAB2-208ENST00000473686 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
EFCAB2-208ENST00000473686 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
EFCAB2-208ENST00000473686 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
EFCAB2-208ENST00000473686 NUP160Q12769 1436 aa19.02■□□□□ 0.64
EFCAB2-208ENST00000473686 SHROOM2Q13796 1616 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms