RNA–Protein interactions for RNA: ENST00000338376.7

RMDN3-202, Transcript of regulator of microtubule dynamics 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RMDN3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-202ENST00000338376 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
RMDN3-202ENST00000338376 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
RMDN3-202ENST00000338376 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
RMDN3-202ENST00000338376 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
RMDN3-202ENST00000338376 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
RMDN3-202ENST00000338376 ABCC9O60706 1549 aa31.74■■■□□ 2.67
RMDN3-202ENST00000338376 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
RMDN3-202ENST00000338376 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
RMDN3-202ENST00000338376 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
RMDN3-202ENST00000338376 NACADO15069 1562 aa30.89■■■□□ 2.54
RMDN3-202ENST00000338376 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
RMDN3-202ENST00000338376 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
RMDN3-202ENST00000338376 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
RMDN3-202ENST00000338376 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
RMDN3-202ENST00000338376 CECR2Q9BXF3 1484 aa29.95■■■□□ 2.38
RMDN3-202ENST00000338376 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
RMDN3-202ENST00000338376 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
RMDN3-202ENST00000338376 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
RMDN3-202ENST00000338376 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
RMDN3-202ENST00000338376 WIZO95785 1651 aa29.6■■■□□ 2.33
RMDN3-202ENST00000338376 BAZ1AQ9NRL2 1556 aaPredicted RBP29.5■■■□□ 2.31
RMDN3-202ENST00000338376 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
RMDN3-202ENST00000338376 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
RMDN3-202ENST00000338376 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.23
RMDN3-202ENST00000338376 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
RMDN3-202ENST00000338376 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
RMDN3-202ENST00000338376 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
RMDN3-202ENST00000338376 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
RMDN3-202ENST00000338376 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
RMDN3-202ENST00000338376 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
RMDN3-202ENST00000338376 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
RMDN3-202ENST00000338376 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
RMDN3-202ENST00000338376 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
RMDN3-202ENST00000338376 FAM9AQ8IZU1 332 aaPredicted RBP28.6■■■□□ 2.17
RMDN3-202ENST00000338376 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
RMDN3-202ENST00000338376 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
RMDN3-202ENST00000338376 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
RMDN3-202ENST00000338376 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
RMDN3-202ENST00000338376 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
RMDN3-202ENST00000338376 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
RMDN3-202ENST00000338376 SOGA1O94964 1423 aa28.14■■■□□ 2.1
RMDN3-202ENST00000338376 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
RMDN3-202ENST00000338376 CFTRP13569 1480 aa27.92■■■□□ 2.06
RMDN3-202ENST00000338376 PCGF6Q9BYE7 350 aa27.92■■■□□ 2.06
RMDN3-202ENST00000338376 TOP2BQ02880 1626 aa27.87■■■□□ 2.05
RMDN3-202ENST00000338376 CSRNP3Q8WYN3 585 aa27.83■■■□□ 2.04
RMDN3-202ENST00000338376 HRCP23327 699 aa27.82■■■□□ 2.04
RMDN3-202ENST00000338376 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
RMDN3-202ENST00000338376 EEA1Q15075 1411 aa27.81■■■□□ 2.04
RMDN3-202ENST00000338376 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
RMDN3-202ENST00000338376 CUX1P39880 1505 aa27.78■■■□□ 2.04
RMDN3-202ENST00000338376 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
RMDN3-202ENST00000338376 NESP48681 1621 aa27.68■■■□□ 2.02
RMDN3-202ENST00000338376 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
RMDN3-202ENST00000338376 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
RMDN3-202ENST00000338376 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
RMDN3-202ENST00000338376 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
RMDN3-202ENST00000338376 TNIKQ9UKE5 1360 aa27.6■■■□□ 2.01
RMDN3-202ENST00000338376 TRIM26Q12899 539 aaPredicted RBP27.57■■■□□ 2
RMDN3-202ENST00000338376 KIF21BO75037 1637 aa27.57■■■□□ 2
RMDN3-202ENST00000338376 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
RMDN3-202ENST00000338376 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
RMDN3-202ENST00000338376 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
RMDN3-202ENST00000338376 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
RMDN3-202ENST00000338376 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
RMDN3-202ENST00000338376 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
RMDN3-202ENST00000338376 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
RMDN3-202ENST00000338376 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
RMDN3-202ENST00000338376 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
RMDN3-202ENST00000338376 CUX2O14529 1486 aa27.29■■□□□ 1.96
RMDN3-202ENST00000338376 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
RMDN3-202ENST00000338376 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
RMDN3-202ENST00000338376 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
RMDN3-202ENST00000338376 CLIP1P30622 1438 aa27.25■■□□□ 1.95
RMDN3-202ENST00000338376 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
RMDN3-202ENST00000338376 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
RMDN3-202ENST00000338376 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
RMDN3-202ENST00000338376 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.94
RMDN3-202ENST00000338376 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
RMDN3-202ENST00000338376 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
RMDN3-202ENST00000338376 IGF1RP08069 1367 aa27.15■■□□□ 1.94
RMDN3-202ENST00000338376 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
RMDN3-202ENST00000338376 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
RMDN3-202ENST00000338376 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
RMDN3-202ENST00000338376 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
RMDN3-202ENST00000338376 WDR62O43379 1518 aa27.03■■□□□ 1.92
RMDN3-202ENST00000338376 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
RMDN3-202ENST00000338376 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
RMDN3-202ENST00000338376 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
RMDN3-202ENST00000338376 ZEB1P37275 1124 aaPredicted RBP26.9■■□□□ 1.9
RMDN3-202ENST00000338376 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
RMDN3-202ENST00000338376 ARHGAP35Q9NRY4 1499 aa26.88■■□□□ 1.89
RMDN3-202ENST00000338376 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
RMDN3-202ENST00000338376 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
RMDN3-202ENST00000338376 CUL7Q14999 1698 aa26.79■■□□□ 1.88
RMDN3-202ENST00000338376 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.87
RMDN3-202ENST00000338376 APLP2Q06481 763 aa26.74■■□□□ 1.87
RMDN3-202ENST00000338376 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
RMDN3-202ENST00000338376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.69■■□□□ 1.86
RMDN3-202ENST00000338376 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms