RNA–Protein interactions for RNA: ENST00000283179.14

HNRNPU-201, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HNRNPU, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-201ENST00000283179 NISCHQ9Y2I1 1504 aa30.59■■■□□ 2.49
HNRNPU-201ENST00000283179 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
HNRNPU-201ENST00000283179 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
HNRNPU-201ENST00000283179 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
HNRNPU-201ENST00000283179 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
HNRNPU-201ENST00000283179 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
HNRNPU-201ENST00000283179 ABCC9O60706 1549 aa25.59■■□□□ 1.69
HNRNPU-201ENST00000283179 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
HNRNPU-201ENST00000283179 HRCP23327 699 aa25.5■■□□□ 1.67
HNRNPU-201ENST00000283179 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
HNRNPU-201ENST00000283179 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
HNRNPU-201ENST00000283179 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
HNRNPU-201ENST00000283179 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
HNRNPU-201ENST00000283179 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
HNRNPU-201ENST00000283179 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
HNRNPU-201ENST00000283179 NACADO15069 1562 aa24.67■■□□□ 1.54
HNRNPU-201ENST00000283179 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
HNRNPU-201ENST00000283179 TRIM26Q12899 539 aaPredicted RBP24.53■■□□□ 1.52
HNRNPU-201ENST00000283179 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
HNRNPU-201ENST00000283179 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
HNRNPU-201ENST00000283179 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
HNRNPU-201ENST00000283179 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
HNRNPU-201ENST00000283179 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
HNRNPU-201ENST00000283179 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
HNRNPU-201ENST00000283179 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
HNRNPU-201ENST00000283179 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
HNRNPU-201ENST00000283179 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
HNRNPU-201ENST00000283179 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
HNRNPU-201ENST00000283179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
HNRNPU-201ENST00000283179 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
HNRNPU-201ENST00000283179 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
HNRNPU-201ENST00000283179 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
HNRNPU-201ENST00000283179 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
HNRNPU-201ENST00000283179 WIZO95785 1651 aa23.58■■□□□ 1.37
HNRNPU-201ENST00000283179 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
HNRNPU-201ENST00000283179 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
HNRNPU-201ENST00000283179 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
HNRNPU-201ENST00000283179 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
HNRNPU-201ENST00000283179 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.34
HNRNPU-201ENST00000283179 GTF3C3Q9Y5Q9 886 aa23.37■■□□□ 1.33
HNRNPU-201ENST00000283179 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
HNRNPU-201ENST00000283179 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
HNRNPU-201ENST00000283179 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
HNRNPU-201ENST00000283179 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
HNRNPU-201ENST00000283179 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
HNRNPU-201ENST00000283179 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.29
HNRNPU-201ENST00000283179 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
HNRNPU-201ENST00000283179 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
HNRNPU-201ENST00000283179 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
HNRNPU-201ENST00000283179 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
HNRNPU-201ENST00000283179 SOGA1O94964 1423 aa23.04■■□□□ 1.28
HNRNPU-201ENST00000283179 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
HNRNPU-201ENST00000283179 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
HNRNPU-201ENST00000283179 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
HNRNPU-201ENST00000283179 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
HNRNPU-201ENST00000283179 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
HNRNPU-201ENST00000283179 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
HNRNPU-201ENST00000283179 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
HNRNPU-201ENST00000283179 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.26
HNRNPU-201ENST00000283179 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.26
HNRNPU-201ENST00000283179 MIER1Q8N108 512 aa22.88■■□□□ 1.25
HNRNPU-201ENST00000283179 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
HNRNPU-201ENST00000283179 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
HNRNPU-201ENST00000283179 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.25
HNRNPU-201ENST00000283179 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
HNRNPU-201ENST00000283179 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
HNRNPU-201ENST00000283179 APLP2Q06481 763 aa22.6■■□□□ 1.21
HNRNPU-201ENST00000283179 EEA1Q15075 1411 aa22.55■■□□□ 1.2
HNRNPU-201ENST00000283179 CLIP1P30622 1438 aa22.53■■□□□ 1.2
HNRNPU-201ENST00000283179 MYT1Q01538 1121 aa22.45■■□□□ 1.18
HNRNPU-201ENST00000283179 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
HNRNPU-201ENST00000283179 NESP48681 1621 aa22.44■■□□□ 1.18
HNRNPU-201ENST00000283179 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
HNRNPU-201ENST00000283179 CFTRP13569 1480 aa22.42■■□□□ 1.18
HNRNPU-201ENST00000283179 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
HNRNPU-201ENST00000283179 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
HNRNPU-201ENST00000283179 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
HNRNPU-201ENST00000283179 ITGAEP38570 1179 aa22.32■■□□□ 1.16
HNRNPU-201ENST00000283179 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
HNRNPU-201ENST00000283179 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
HNRNPU-201ENST00000283179 KIF21BO75037 1637 aa22.26■■□□□ 1.15
HNRNPU-201ENST00000283179 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
HNRNPU-201ENST00000283179 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
HNRNPU-201ENST00000283179 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
HNRNPU-201ENST00000283179 CUX1P39880 1505 aa22.18■■□□□ 1.14
HNRNPU-201ENST00000283179 BCANQ96GW7 911 aa22.14■■□□□ 1.14
HNRNPU-201ENST00000283179 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
HNRNPU-201ENST00000283179 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
HNRNPU-201ENST00000283179 TSHZ2Q9NRE2 1034 aa22.04■■□□□ 1.12
HNRNPU-201ENST00000283179 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
HNRNPU-201ENST00000283179 ARAP1Q96P48 1450 aa22.02■■□□□ 1.12
HNRNPU-201ENST00000283179 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
HNRNPU-201ENST00000283179 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
HNRNPU-201ENST00000283179 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
HNRNPU-201ENST00000283179 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
HNRNPU-201ENST00000283179 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
HNRNPU-201ENST00000283179 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
HNRNPU-201ENST00000283179 CUX2O14529 1486 aa21.94■■□□□ 1.1
HNRNPU-201ENST00000283179 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
HNRNPU-201ENST00000283179 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms