RNA–Protein interactions for RNA: ENST00000368876.2

AMD1-201, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 5 BASIC

Gene AMD1, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-201ENST00000368876 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
AMD1-201ENST00000368876 ABCC9O60706 1549 aa20.92■□□□□ 0.94
AMD1-201ENST00000368876 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
AMD1-201ENST00000368876 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
AMD1-201ENST00000368876 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
AMD1-201ENST00000368876 NACADO15069 1562 aa19.65■□□□□ 0.74
AMD1-201ENST00000368876 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
AMD1-201ENST00000368876 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
AMD1-201ENST00000368876 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
AMD1-201ENST00000368876 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
AMD1-201ENST00000368876 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
AMD1-201ENST00000368876 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
AMD1-201ENST00000368876 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
AMD1-201ENST00000368876 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
AMD1-201ENST00000368876 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.61
AMD1-201ENST00000368876 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
AMD1-201ENST00000368876 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
AMD1-201ENST00000368876 CUX2O14529 1486 aa18.66■□□□□ 0.58
AMD1-201ENST00000368876 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
AMD1-201ENST00000368876 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
AMD1-201ENST00000368876 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
AMD1-201ENST00000368876 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
AMD1-201ENST00000368876 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
AMD1-201ENST00000368876 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
AMD1-201ENST00000368876 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
AMD1-201ENST00000368876 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
AMD1-201ENST00000368876 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
AMD1-201ENST00000368876 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
AMD1-201ENST00000368876 NESP48681 1621 aa17.74■□□□□ 0.43
AMD1-201ENST00000368876 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
AMD1-201ENST00000368876 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
AMD1-201ENST00000368876 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
AMD1-201ENST00000368876 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
AMD1-201ENST00000368876 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
AMD1-201ENST00000368876 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
AMD1-201ENST00000368876 WDR62O43379 1518 aa17.58■□□□□ 0.41
AMD1-201ENST00000368876 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
AMD1-201ENST00000368876 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
AMD1-201ENST00000368876 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
AMD1-201ENST00000368876 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
AMD1-201ENST00000368876 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
AMD1-201ENST00000368876 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
AMD1-201ENST00000368876 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
AMD1-201ENST00000368876 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
AMD1-201ENST00000368876 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
AMD1-201ENST00000368876 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
AMD1-201ENST00000368876 CFTRP13569 1480 aa17.1■□□□□ 0.33
AMD1-201ENST00000368876 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
AMD1-201ENST00000368876 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
AMD1-201ENST00000368876 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
AMD1-201ENST00000368876 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
AMD1-201ENST00000368876 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
AMD1-201ENST00000368876 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
AMD1-201ENST00000368876 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
AMD1-201ENST00000368876 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
AMD1-201ENST00000368876 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
AMD1-201ENST00000368876 WIZO95785 1651 aa16.9■□□□□ 0.3
AMD1-201ENST00000368876 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
AMD1-201ENST00000368876 CHD1O14646 1710 aa16.88■□□□□ 0.29
AMD1-201ENST00000368876 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
AMD1-201ENST00000368876 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
AMD1-201ENST00000368876 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
AMD1-201ENST00000368876 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
AMD1-201ENST00000368876 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
AMD1-201ENST00000368876 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
AMD1-201ENST00000368876 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
AMD1-201ENST00000368876 SYNJ1O43426 1573 aa16.71■□□□□ 0.26
AMD1-201ENST00000368876 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.254e-8■■■■■ 34
AMD1-201ENST00000368876 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
AMD1-201ENST00000368876 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
AMD1-201ENST00000368876 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
AMD1-201ENST00000368876 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
AMD1-201ENST00000368876 FBLN2P98095 1184 aa16.51■□□□□ 0.23
AMD1-201ENST00000368876 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
AMD1-201ENST00000368876 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
AMD1-201ENST00000368876 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
AMD1-201ENST00000368876 SOGA1O94964 1423 aa16.43■□□□□ 0.22
AMD1-201ENST00000368876 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
AMD1-201ENST00000368876 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
AMD1-201ENST00000368876 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
AMD1-201ENST00000368876 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
AMD1-201ENST00000368876 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
AMD1-201ENST00000368876 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
AMD1-201ENST00000368876 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
AMD1-201ENST00000368876 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
AMD1-201ENST00000368876 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
AMD1-201ENST00000368876 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
AMD1-201ENST00000368876 NUP160Q12769 1436 aa16.25■□□□□ 0.19
AMD1-201ENST00000368876 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
AMD1-201ENST00000368876 ABCC10Q5T3U5 1492 aa16.25■□□□□ 0.19
AMD1-201ENST00000368876 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
AMD1-201ENST00000368876 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
AMD1-201ENST00000368876 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
AMD1-201ENST00000368876 KDM6BO15054 1643 aa16.2■□□□□ 0.18
AMD1-201ENST00000368876 CUX1P39880 1505 aa16.2■□□□□ 0.18
AMD1-201ENST00000368876 KDM4FA0A1W2PPD8 638 aa16.19■□□□□ 0.18
AMD1-201ENST00000368876 DIP2BQ9P265 1576 aa16.18■□□□□ 0.18
AMD1-201ENST00000368876 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
AMD1-201ENST00000368876 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
AMD1-201ENST00000368876 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms