RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
HNRNPU-205ENST00000444376 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
HNRNPU-205ENST00000444376 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
HNRNPU-205ENST00000444376 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
HNRNPU-205ENST00000444376 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
HNRNPU-205ENST00000444376 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
HNRNPU-205ENST00000444376 APLP2Q06481 763 aa25.6■■□□□ 1.69
HNRNPU-205ENST00000444376 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
HNRNPU-205ENST00000444376 TTBK1Q5TCY1 1321 aaPredicted RBP25.22■■□□□ 1.63
HNRNPU-205ENST00000444376 PCGF6Q9BYE7 350 aa25.21■■□□□ 1.63
HNRNPU-205ENST00000444376 ERICH6Q7L0X2 663 aa25.08■■□□□ 1.61
HNRNPU-205ENST00000444376 CENPBP07199 599 aaPredicted RBP25.04■■□□□ 1.6
HNRNPU-205ENST00000444376 ZEB1P37275 1124 aaPredicted RBP24.94■■□□□ 1.58
HNRNPU-205ENST00000444376 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
HNRNPU-205ENST00000444376 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
HNRNPU-205ENST00000444376 TRIM41Q8WV44 630 aa24.7■■□□□ 1.55
HNRNPU-205ENST00000444376 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
HNRNPU-205ENST00000444376 NEFLP07196 543 aa24.53■■□□□ 1.52
HNRNPU-205ENST00000444376 YTHDC1Q96MU7 727 aaKnown RBP24.5■■□□□ 1.51
HNRNPU-205ENST00000444376 UBTFP17480 764 aaKnown RBP24.48■■□□□ 1.51
HNRNPU-205ENST00000444376 MYT1Q01538 1121 aa24.4■■□□□ 1.5
HNRNPU-205ENST00000444376 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
HNRNPU-205ENST00000444376 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
HNRNPU-205ENST00000444376 DAXXQ9UER7 740 aaPredicted RBP23.91■■□□□ 1.42
HNRNPU-205ENST00000444376 HRCP23327 699 aa23.87■■□□□ 1.41
HNRNPU-205ENST00000444376 ITGAEP38570 1179 aa23.82■■□□□ 1.4
HNRNPU-205ENST00000444376 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
HNRNPU-205ENST00000444376 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
HNRNPU-205ENST00000444376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
HNRNPU-205ENST00000444376 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
HNRNPU-205ENST00000444376 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
HNRNPU-205ENST00000444376 CNGB1Q14028 1251 aaPredicted RBP23.56■■□□□ 1.36
HNRNPU-205ENST00000444376 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
HNRNPU-205ENST00000444376 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.33
HNRNPU-205ENST00000444376 ZNF316A6NFI3 1004 aaPredicted RBP23.38■■□□□ 1.33
HNRNPU-205ENST00000444376 RTL5Q5HYW3 569 aaPredicted RBP23.37■■□□□ 1.33
HNRNPU-205ENST00000444376 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
HNRNPU-205ENST00000444376 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
HNRNPU-205ENST00000444376 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
HNRNPU-205ENST00000444376 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
HNRNPU-205ENST00000444376 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
HNRNPU-205ENST00000444376 BCANQ96GW7 911 aa23.05■■□□□ 1.28
HNRNPU-205ENST00000444376 GTF3C3Q9Y5Q9 886 aa23■■□□□ 1.27
HNRNPU-205ENST00000444376 ANP32CO43423 234 aa22.96■■□□□ 1.27
HNRNPU-205ENST00000444376 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
HNRNPU-205ENST00000444376 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
HNRNPU-205ENST00000444376 ZBTB47Q9UFB7 747 aaPredicted RBP22.81■■□□□ 1.24
HNRNPU-205ENST00000444376 ABCC9O60706 1549 aa22.77■■□□□ 1.24
HNRNPU-205ENST00000444376 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
HNRNPU-205ENST00000444376 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.22
HNRNPU-205ENST00000444376 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
HNRNPU-205ENST00000444376 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
HNRNPU-205ENST00000444376 ANP32AP39687 249 aaKnown RBP22.57■■□□□ 1.2
HNRNPU-205ENST00000444376 SLC24A1O60721 1099 aa22.56■■□□□ 1.2
HNRNPU-205ENST00000444376 NEFMP07197 916 aa22.51■■□□□ 1.19
HNRNPU-205ENST00000444376 FBLN2P98095 1184 aa22.48■■□□□ 1.19
HNRNPU-205ENST00000444376 NPM2Q86SE8 214 aaKnown RBP22.46■■□□□ 1.19
HNRNPU-205ENST00000444376 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
HNRNPU-205ENST00000444376 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
HNRNPU-205ENST00000444376 FKBP8Q14318 412 aa22.34■■□□□ 1.17
HNRNPU-205ENST00000444376 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
HNRNPU-205ENST00000444376 ZNF777Q9ULD5 760 aaPredicted RBP22.32■■□□□ 1.16
HNRNPU-205ENST00000444376 ANP32BQ92688 251 aaKnown RBP22.26■■□□□ 1.15
HNRNPU-205ENST00000444376 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
HNRNPU-205ENST00000444376 HSP90AA1P07900 732 aaKnown RBP22.2■■□□□ 1.14
HNRNPU-205ENST00000444376 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
HNRNPU-205ENST00000444376 EIF5BO60841 1220 aaKnown RBP22.18■■□□□ 1.14
HNRNPU-205ENST00000444376 UPF2Q9HAU5 1272 aaKnown RBP22.17■■□□□ 1.14
HNRNPU-205ENST00000444376 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
HNRNPU-205ENST00000444376 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
HNRNPU-205ENST00000444376 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
HNRNPU-205ENST00000444376 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
HNRNPU-205ENST00000444376 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
HNRNPU-205ENST00000444376 CCDC136Q96JN2 1154 aa22.02■■□□□ 1.11
HNRNPU-205ENST00000444376 NBR1Q14596 966 aa22.01■■□□□ 1.11
HNRNPU-205ENST00000444376 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
HNRNPU-205ENST00000444376 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
HNRNPU-205ENST00000444376 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.98■■□□□ 1.11
HNRNPU-205ENST00000444376 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
HNRNPU-205ENST00000444376 GLIPR1L2Q4G1C9 344 aa21.94■■□□□ 1.1
HNRNPU-205ENST00000444376 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■□□□ 12.7
HNRNPU-205ENST00000444376 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
HNRNPU-205ENST00000444376 CHIC2Q9UKJ5 165 aa21.9■■□□□ 1.1
HNRNPU-205ENST00000444376 ARXQ96QS3 562 aa21.87■■□□□ 1.09
HNRNPU-205ENST00000444376 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
HNRNPU-205ENST00000444376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.097e-11■■□□□ 14
HNRNPU-205ENST00000444376 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
HNRNPU-205ENST00000444376 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
HNRNPU-205ENST00000444376 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
HNRNPU-205ENST00000444376 MIER1Q8N108 512 aa21.8■■□□□ 1.08
HNRNPU-205ENST00000444376 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
HNRNPU-205ENST00000444376 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
HNRNPU-205ENST00000444376 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
HNRNPU-205ENST00000444376 HIRIP3Q9BW71 556 aaPredicted RBP21.71■■□□□ 1.07
HNRNPU-205ENST00000444376 DDRGK1Q96HY6 314 aa21.69■■□□□ 1.06
HNRNPU-205ENST00000444376 MTUS2Q5JR59 1369 aa21.68■■□□□ 1.06
HNRNPU-205ENST00000444376 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
HNRNPU-205ENST00000444376 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
HNRNPU-205ENST00000444376 EIF4G2P78344 907 aaKnown RBP eCLIP21.66■■□□□ 1.062e-12■■■■□ 22
HNRNPU-205ENST00000444376 BECN1Q14457 450 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms