RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
RMDN3-207ENST00000558777 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
RMDN3-207ENST00000558777 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
RMDN3-207ENST00000558777 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
RMDN3-207ENST00000558777 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
RMDN3-207ENST00000558777 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
RMDN3-207ENST00000558777 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
RMDN3-207ENST00000558777 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
RMDN3-207ENST00000558777 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
RMDN3-207ENST00000558777 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
RMDN3-207ENST00000558777 ABCC9O60706 1549 aa29.04■■■□□ 2.24
RMDN3-207ENST00000558777 NACADO15069 1562 aa29.01■■■□□ 2.23
RMDN3-207ENST00000558777 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
RMDN3-207ENST00000558777 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
RMDN3-207ENST00000558777 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
RMDN3-207ENST00000558777 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
RMDN3-207ENST00000558777 WIZO95785 1651 aa28.11■■■□□ 2.09
RMDN3-207ENST00000558777 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
RMDN3-207ENST00000558777 LOC105371045A0A1W2PR82 267 aa28.04■■■□□ 2.08
RMDN3-207ENST00000558777 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.08
RMDN3-207ENST00000558777 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
RMDN3-207ENST00000558777 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
RMDN3-207ENST00000558777 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
RMDN3-207ENST00000558777 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.04
RMDN3-207ENST00000558777 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
RMDN3-207ENST00000558777 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
RMDN3-207ENST00000558777 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
RMDN3-207ENST00000558777 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
RMDN3-207ENST00000558777 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
RMDN3-207ENST00000558777 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
RMDN3-207ENST00000558777 HRCP23327 699 aa27.56■■■□□ 2
RMDN3-207ENST00000558777 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
RMDN3-207ENST00000558777 TRIM26Q12899 539 aaPredicted RBP27.38■■□□□ 1.97
RMDN3-207ENST00000558777 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
RMDN3-207ENST00000558777 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
RMDN3-207ENST00000558777 EHMT2Q96KQ7 1210 aa27.22■■□□□ 1.95
RMDN3-207ENST00000558777 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
RMDN3-207ENST00000558777 SOGA1O94964 1423 aa27.04■■□□□ 1.92
RMDN3-207ENST00000558777 EEA1Q15075 1411 aa27.02■■□□□ 1.92
RMDN3-207ENST00000558777 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
RMDN3-207ENST00000558777 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
RMDN3-207ENST00000558777 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.9
RMDN3-207ENST00000558777 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
RMDN3-207ENST00000558777 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
RMDN3-207ENST00000558777 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
RMDN3-207ENST00000558777 NCAPD3P42695 1498 aa26.85■■□□□ 1.89
RMDN3-207ENST00000558777 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
RMDN3-207ENST00000558777 CEP162Q5TB80 1403 aa26.79■■□□□ 1.88
RMDN3-207ENST00000558777 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
RMDN3-207ENST00000558777 ZEB1P37275 1124 aaPredicted RBP26.69■■□□□ 1.86
RMDN3-207ENST00000558777 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
RMDN3-207ENST00000558777 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.85
RMDN3-207ENST00000558777 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
RMDN3-207ENST00000558777 KIF21BO75037 1637 aa26.62■■□□□ 1.85
RMDN3-207ENST00000558777 BIVM-ERCC5R4GMW8 1640 aa26.55■■□□□ 1.84
RMDN3-207ENST00000558777 CFTRP13569 1480 aa26.51■■□□□ 1.83
RMDN3-207ENST00000558777 RAPGEF2Q9Y4G8 1499 aa26.41■■□□□ 1.82
RMDN3-207ENST00000558777 CUX1P39880 1505 aa26.41■■□□□ 1.82
RMDN3-207ENST00000558777 CLIP1P30622 1438 aa26.38■■□□□ 1.81
RMDN3-207ENST00000558777 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
RMDN3-207ENST00000558777 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
RMDN3-207ENST00000558777 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
RMDN3-207ENST00000558777 VPS8Q8N3P4 1428 aa26.26■■□□□ 1.79
RMDN3-207ENST00000558777 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
RMDN3-207ENST00000558777 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
RMDN3-207ENST00000558777 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
RMDN3-207ENST00000558777 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
RMDN3-207ENST00000558777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.22■■□□□ 1.79
RMDN3-207ENST00000558777 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
RMDN3-207ENST00000558777 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
RMDN3-207ENST00000558777 APLP2Q06481 763 aa26.03■■□□□ 1.76
RMDN3-207ENST00000558777 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
RMDN3-207ENST00000558777 CUX2O14529 1486 aa25.99■■□□□ 1.75
RMDN3-207ENST00000558777 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
RMDN3-207ENST00000558777 IGF1RP08069 1367 aa25.97■■□□□ 1.75
RMDN3-207ENST00000558777 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
RMDN3-207ENST00000558777 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
RMDN3-207ENST00000558777 CARMIL1Q5VZK9 1371 aa25.84■■□□□ 1.73
RMDN3-207ENST00000558777 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.72
RMDN3-207ENST00000558777 HNRNPUL2Q1KMD3 747 aaKnown RBP25.82■■□□□ 1.72
RMDN3-207ENST00000558777 NESP48681 1621 aa25.79■■□□□ 1.72
RMDN3-207ENST00000558777 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
RMDN3-207ENST00000558777 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
RMDN3-207ENST00000558777 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
RMDN3-207ENST00000558777 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
RMDN3-207ENST00000558777 LAMC3Q9Y6N6 1575 aa25.72■■□□□ 1.71
RMDN3-207ENST00000558777 RAD54L2Q9Y4B4 1467 aa25.7■■□□□ 1.71
RMDN3-207ENST00000558777 RRBP1Q9P2E9 1410 aaKnown RBP25.62■■□□□ 1.69
RMDN3-207ENST00000558777 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
RMDN3-207ENST00000558777 MAP3K1Q13233 1512 aa25.58■■□□□ 1.69
RMDN3-207ENST00000558777 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
RMDN3-207ENST00000558777 CUL7Q14999 1698 aa25.54■■□□□ 1.68
RMDN3-207ENST00000558777 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
RMDN3-207ENST00000558777 TIAM1Q13009 1591 aa25.51■■□□□ 1.67
RMDN3-207ENST00000558777 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
RMDN3-207ENST00000558777 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
RMDN3-207ENST00000558777 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
RMDN3-207ENST00000558777 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
RMDN3-207ENST00000558777 ZNF316A6NFI3 1004 aaPredicted RBP25.45■■□□□ 1.66
RMDN3-207ENST00000558777 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms