RNA–Protein interactions for RNA: ENST00000340253.9

FBXO38-202, Transcript of F-box protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FBXO38, Length 4,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-202ENST00000340253 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
FBXO38-202ENST00000340253 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
FBXO38-202ENST00000340253 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
FBXO38-202ENST00000340253 ABCC9O60706 1549 aa16.21■□□□□ 0.18
FBXO38-202ENST00000340253 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
FBXO38-202ENST00000340253 NACADO15069 1562 aa15.75■□□□□ 0.11
FBXO38-202ENST00000340253 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
FBXO38-202ENST00000340253 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
FBXO38-202ENST00000340253 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
FBXO38-202ENST00000340253 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
FBXO38-202ENST00000340253 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
FBXO38-202ENST00000340253 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
FBXO38-202ENST00000340253 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
FBXO38-202ENST00000340253 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
FBXO38-202ENST00000340253 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
FBXO38-202ENST00000340253 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
FBXO38-202ENST00000340253 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.05
FBXO38-202ENST00000340253 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
FBXO38-202ENST00000340253 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
FBXO38-202ENST00000340253 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
FBXO38-202ENST00000340253 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
FBXO38-202ENST00000340253 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
FBXO38-202ENST00000340253 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
FBXO38-202ENST00000340253 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
FBXO38-202ENST00000340253 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
FBXO38-202ENST00000340253 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
FBXO38-202ENST00000340253 WIZO95785 1651 aa14.47□□□□□ -0.09
FBXO38-202ENST00000340253 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
FBXO38-202ENST00000340253 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
FBXO38-202ENST00000340253 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
FBXO38-202ENST00000340253 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.11
FBXO38-202ENST00000340253 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
FBXO38-202ENST00000340253 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
FBXO38-202ENST00000340253 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
FBXO38-202ENST00000340253 FAM9AQ8IZU1 332 aaPredicted RBP14.26□□□□□ -0.13
FBXO38-202ENST00000340253 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
FBXO38-202ENST00000340253 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
FBXO38-202ENST00000340253 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
FBXO38-202ENST00000340253 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
FBXO38-202ENST00000340253 CFTRP13569 1480 aa14.09□□□□□ -0.15
FBXO38-202ENST00000340253 PCGF6Q9BYE7 350 aa14.09□□□□□ -0.15
FBXO38-202ENST00000340253 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
FBXO38-202ENST00000340253 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
FBXO38-202ENST00000340253 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
FBXO38-202ENST00000340253 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
FBXO38-202ENST00000340253 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.17
FBXO38-202ENST00000340253 NESP48681 1621 aa13.99□□□□□ -0.17
FBXO38-202ENST00000340253 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
FBXO38-202ENST00000340253 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
FBXO38-202ENST00000340253 SOGA1O94964 1423 aa13.81□□□□□ -0.2
FBXO38-202ENST00000340253 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
FBXO38-202ENST00000340253 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
FBXO38-202ENST00000340253 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
FBXO38-202ENST00000340253 EEA1Q15075 1411 aa13.78□□□□□ -0.2
FBXO38-202ENST00000340253 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
FBXO38-202ENST00000340253 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
FBXO38-202ENST00000340253 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
FBXO38-202ENST00000340253 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
FBXO38-202ENST00000340253 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
FBXO38-202ENST00000340253 CUX1P39880 1505 aa13.73□□□□□ -0.21
FBXO38-202ENST00000340253 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
FBXO38-202ENST00000340253 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
FBXO38-202ENST00000340253 CUX2O14529 1486 aa13.73□□□□□ -0.21
FBXO38-202ENST00000340253 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
FBXO38-202ENST00000340253 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
FBXO38-202ENST00000340253 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
FBXO38-202ENST00000340253 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.22
FBXO38-202ENST00000340253 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
FBXO38-202ENST00000340253 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
FBXO38-202ENST00000340253 FBLN2P98095 1184 aa13.69□□□□□ -0.22
FBXO38-202ENST00000340253 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
FBXO38-202ENST00000340253 WDR62O43379 1518 aa13.66□□□□□ -0.22
FBXO38-202ENST00000340253 APLP2Q06481 763 aa13.66□□□□□ -0.22
FBXO38-202ENST00000340253 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
FBXO38-202ENST00000340253 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
FBXO38-202ENST00000340253 HRCP23327 699 aa13.65□□□□□ -0.22
FBXO38-202ENST00000340253 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
FBXO38-202ENST00000340253 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
FBXO38-202ENST00000340253 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
FBXO38-202ENST00000340253 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
FBXO38-202ENST00000340253 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
FBXO38-202ENST00000340253 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
FBXO38-202ENST00000340253 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
FBXO38-202ENST00000340253 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.241e-10■■■■■ 31
FBXO38-202ENST00000340253 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
FBXO38-202ENST00000340253 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
FBXO38-202ENST00000340253 IGF1RP08069 1367 aa13.51□□□□□ -0.25
FBXO38-202ENST00000340253 CCER1Q8TC90 406 aaPredicted RBP13.5□□□□□ -0.25
FBXO38-202ENST00000340253 WDR97A6NE52 1622 aa13.49□□□□□ -0.25
FBXO38-202ENST00000340253 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
FBXO38-202ENST00000340253 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
FBXO38-202ENST00000340253 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
FBXO38-202ENST00000340253 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.26
FBXO38-202ENST00000340253 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
FBXO38-202ENST00000340253 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
FBXO38-202ENST00000340253 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
FBXO38-202ENST00000340253 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
FBXO38-202ENST00000340253 TNIKQ9UKE5 1360 aa13.41□□□□□ -0.26
FBXO38-202ENST00000340253 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
FBXO38-202ENST00000340253 CUL7Q14999 1698 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms