Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.04■■■□□ 2.72
BRMS1Q9HCU9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
BRMS1Q9HCU9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
BRMS1Q9HCU9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
BRMS1Q9HCU9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
BRMS1Q9HCU9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32■■■□□ 2.71
BRMS1Q9HCU9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
BRMS1Q9HCU9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
BRMS1Q9HCU9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
BRMS1Q9HCU9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.93■■■□□ 2.7
BRMS1Q9HCU9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.91■■■□□ 2.7
BRMS1Q9HCU9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BRMS1Q9HCU9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
BRMS1Q9HCU9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.89■■■□□ 2.69
BRMS1Q9HCU9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.88■■■□□ 2.69
BRMS1Q9HCU9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.88■■■□□ 2.69
BRMS1Q9HCU9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
BRMS1Q9HCU9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.85■■■□□ 2.69
BRMS1Q9HCU9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BRMS1Q9HCU9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.85■■■□□ 2.69
BRMS1Q9HCU9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BRMS1Q9HCU9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.84■■■□□ 2.69
BRMS1Q9HCU9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
BRMS1Q9HCU9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
BRMS1Q9HCU9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BRMS1Q9HCU9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.81■■■□□ 2.68
BRMS1Q9HCU9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.79■■■□□ 2.68
BRMS1Q9HCU9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.78■■■□□ 2.68
BRMS1Q9HCU9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
BRMS1Q9HCU9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
BRMS1Q9HCU9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
BRMS1Q9HCU9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
BRMS1Q9HCU9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.72■■■□□ 2.67
BRMS1Q9HCU9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
BRMS1Q9HCU9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
BRMS1Q9HCU9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
BRMS1Q9HCU9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
BRMS1Q9HCU9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.68■■■□□ 2.66
BRMS1Q9HCU9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.66■■■□□ 2.66
BRMS1Q9HCU9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.66■■■□□ 2.66
BRMS1Q9HCU9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.65■■■□□ 2.66
BRMS1Q9HCU9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
BRMS1Q9HCU9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
BRMS1Q9HCU9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
BRMS1Q9HCU9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
BRMS1Q9HCU9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
BRMS1Q9HCU9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
BRMS1Q9HCU9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.61■■■□□ 2.65
BRMS1Q9HCU9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
BRMS1Q9HCU9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
BRMS1Q9HCU9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
BRMS1Q9HCU9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.6■■■□□ 2.65
BRMS1Q9HCU9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.6■■■□□ 2.65
BRMS1Q9HCU9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BRMS1Q9HCU9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
BRMS1Q9HCU9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
BRMS1Q9HCU9 AC120057.4-201ENST00000624722 1615 ntBASIC31.59■■■□□ 2.65
BRMS1Q9HCU9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BRMS1Q9HCU9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.57■■■□□ 2.64
BRMS1Q9HCU9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.57■■■□□ 2.64
BRMS1Q9HCU9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BRMS1Q9HCU9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.56■■■□□ 2.64
BRMS1Q9HCU9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
BRMS1Q9HCU9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRMS1Q9HCU9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRMS1Q9HCU9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.53■■■□□ 2.64
BRMS1Q9HCU9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BRMS1Q9HCU9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BRMS1Q9HCU9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BRMS1Q9HCU9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRMS1Q9HCU9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRMS1Q9HCU9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
BRMS1Q9HCU9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.44■■■□□ 2.62
BRMS1Q9HCU9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
BRMS1Q9HCU9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
BRMS1Q9HCU9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
BRMS1Q9HCU9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRMS1Q9HCU9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
BRMS1Q9HCU9 RARRES2P7-201ENST00000567349 469 ntBASIC31.39■■■□□ 2.62
BRMS1Q9HCU9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
BRMS1Q9HCU9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
BRMS1Q9HCU9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
BRMS1Q9HCU9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BRMS1Q9HCU9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.35■■■□□ 2.61
BRMS1Q9HCU9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRMS1Q9HCU9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
BRMS1Q9HCU9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.32■■■□□ 2.61
BRMS1Q9HCU9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
BRMS1Q9HCU9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.32■■■□□ 2.6
BRMS1Q9HCU9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.3■■■□□ 2.6
BRMS1Q9HCU9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
BRMS1Q9HCU9 AL133380.1-201ENST00000506013 324 ntBASIC31.27■■■□□ 2.6
BRMS1Q9HCU9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
BRMS1Q9HCU9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.27■■■□□ 2.6
BRMS1Q9HCU9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
BRMS1Q9HCU9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.25■■■□□ 2.59
BRMS1Q9HCU9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
BRMS1Q9HCU9 SETD8P1-201ENST00000623146 1180 ntBASIC31.24■■■□□ 2.59
BRMS1Q9HCU9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
BRMS1Q9HCU9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms