RNA–Protein interactions for RNA: ENST00000301729.8

ECI1-201, Transcript of enoyl-CoA delta isomerase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ECI1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECI1-201ENST00000301729 NISCHQ9Y2I1 1504 aa68.57■■■■■ 8.57
ECI1-201ENST00000301729 CCDC180Q9P1Z9 1646 aa61.11■■■■■ 7.37
ECI1-201ENST00000301729 ABCC9O60706 1549 aa60■■■■■ 7.2
ECI1-201ENST00000301729 RB1CC1Q8TDY2 1594 aa57.65■■■■■ 6.82
ECI1-201ENST00000301729 NACADO15069 1562 aa57.52■■■■■ 6.8
ECI1-201ENST00000301729 DCAF8L2P0C7V8 631 aa57.38■■■■■ 6.78
ECI1-201ENST00000301729 MYO15BQ96JP2 1530 aa57.11■■■■■ 6.73
ECI1-201ENST00000301729 ZCCHC6Q5VYS8 1495 aaKnown RBP57.07■■■■■ 6.73
ECI1-201ENST00000301729 DCAF1Q9Y4B6 1507 aa56.76■■■■■ 6.68
ECI1-201ENST00000301729 UNC13AQ9UPW8 1703 aa56.3■■■■■ 6.6
ECI1-201ENST00000301729 PABPN1Q86U42 306 aaKnown RBP eCLIP56■■■■■ 6.56
ECI1-201ENST00000301729 BICRAQ9NZM4 1560 aa55.87■■■■■ 6.53
ECI1-201ENST00000301729 SCRIBQ14160 1630 aa55.69■■■■■ 6.51
ECI1-201ENST00000301729 SHROOM4Q9ULL8 1493 aa55.34■■■■■ 6.45
ECI1-201ENST00000301729 DNAJC5BQ9UF47 199 aa55.27■■■■■ 6.44
ECI1-201ENST00000301729 EIF4G1Q04637 1599 aaKnown RBP54.44■■■■■ 6.31
ECI1-201ENST00000301729 CC2D2AQ9P2K1 1620 aa54.28■■■■■ 6.28
ECI1-201ENST00000301729 CECR2Q9BXF3 1484 aa53.96■■■■■ 6.23
ECI1-201ENST00000301729 SMARCA4P51532 1647 aa53.27■■■■■ 6.12
ECI1-201ENST00000301729 BAZ1AQ9NRL2 1556 aaPredicted RBP53.19■■■■■ 6.11
ECI1-201ENST00000301729 NCAPD3P42695 1498 aa53.07■■■■■ 6.09
ECI1-201ENST00000301729 ATAD2BQ9ULI0 1458 aa53.04■■■■■ 6.08
ECI1-201ENST00000301729 SMARCA2P51531 1590 aa53■■■■■ 6.08
ECI1-201ENST00000301729 MROH2BQ7Z745 1585 aa52.82■■■■■ 6.05
ECI1-201ENST00000301729 HMGXB3Q12766 1538 aa52.8■■■■■ 6.04
ECI1-201ENST00000301729 PEG3Q9GZU2 1588 aa52.77■■■■■ 6.04
ECI1-201ENST00000301729 BAZ1BQ9UIG0 1483 aaKnown RBP52.61■■■■■ 6.01
ECI1-201ENST00000301729 WIZO95785 1651 aa52.24■■■■■ 5.95
ECI1-201ENST00000301729 RSF1Q96T23 1441 aaPredicted RBP52.12■■■■■ 5.93
ECI1-201ENST00000301729 NESP48681 1621 aa51.83■■■■■ 5.89
ECI1-201ENST00000301729 ERCC6Q03468 1493 aa51.78■■■■■ 5.88
ECI1-201ENST00000301729 LAMC3Q9Y6N6 1575 aa51.73■■■■■ 5.87
ECI1-201ENST00000301729 TOP2AP11388 1531 aaKnown RBP51.7■■■■■ 5.87
ECI1-201ENST00000301729 CADPSQ9ULU8 1353 aa51.51■■■■■ 5.84
ECI1-201ENST00000301729 PDS5BQ9NTI5 1447 aa51.4■■■■■ 5.82
ECI1-201ENST00000301729 CUX2O14529 1486 aa51.34■■■■■ 5.81
ECI1-201ENST00000301729 KIF21AQ7Z4S6 1674 aa51.24■■■■■ 5.79
ECI1-201ENST00000301729 CFTRP13569 1480 aa51.15■■■■■ 5.78
ECI1-201ENST00000301729 THOC2Q8NI27 1593 aaKnown RBP51.13■■■■■ 5.78
ECI1-201ENST00000301729 CCDC88BA6NC98 1476 aa51.07■■■■■ 5.77
ECI1-201ENST00000301729 FANCD2Q9BXW9 1451 aa50.91■■■■■ 5.74
ECI1-201ENST00000301729 CEP164Q9UPV0 1460 aa50.89■■■■■ 5.74
ECI1-201ENST00000301729 MRC2Q9UBG0 1479 aa50.86■■■■■ 5.73
ECI1-201ENST00000301729 PRDM2Q13029 1718 aa50.75■■■■■ 5.72
ECI1-201ENST00000301729 WDR62O43379 1518 aa50.71■■■■■ 5.71
ECI1-201ENST00000301729 SUPT5HO00267 1087 aaKnown RBP50.59■■■■■ 5.69
ECI1-201ENST00000301729 URB2Q14146 1524 aaKnown RBP50.4■■■■■ 5.66
ECI1-201ENST00000301729 ABCC8Q09428 1581 aa50.09■■■■■ 5.61
ECI1-201ENST00000301729 TOPBP1Q92547 1522 aa50.06■■■■■ 5.6
ECI1-201ENST00000301729 DNAJC5Q9H3Z4 198 aa50.05■■■■■ 5.6
ECI1-201ENST00000301729 DNMBPQ6XZF7 1577 aa50■■■■■ 5.59
ECI1-201ENST00000301729 IFT140Q96RY7 1462 aa49.83■■■■■ 5.57
ECI1-201ENST00000301729 POLA1P09884 1462 aaPredicted RBP49.62■■■■■ 5.53
ECI1-201ENST00000301729 ZNF608Q9ULD9 1512 aaPredicted RBP49.59■■■■■ 5.53
ECI1-201ENST00000301729 CUX1P39880 1505 aa49.57■■■■■ 5.53
ECI1-201ENST00000301729 TARBP1Q13395 1621 aaKnown RBP49.53■■■■■ 5.52
ECI1-201ENST00000301729 FGD5Q6ZNL6 1462 aa49.46■■■■■ 5.51
ECI1-201ENST00000301729 SOGA1O94964 1423 aa49.42■■■■■ 5.5
ECI1-201ENST00000301729 EIF4G3O43432 1585 aaKnown RBP49.41■■■■■ 5.5
ECI1-201ENST00000301729 RAD54L2Q9Y4B4 1467 aa49.38■■■■■ 5.5
ECI1-201ENST00000301729 AQRO60306 1485 aaKnown RBP eCLIP49.28■■■■■ 5.488e-7■■■□□ 17.1
ECI1-201ENST00000301729 WDR97A6NE52 1622 aa49.19■■■■■ 5.46
ECI1-201ENST00000301729 WRNQ14191 1432 aaPredicted RBP eCLIP49.18■■■■■ 5.46
ECI1-201ENST00000301729 OSCARQ8IYS5 282 aa49.15■■■■■ 5.46
ECI1-201ENST00000301729 TDRD9Q8NDG6 1382 aaKnown RBP49.15■■■■■ 5.46
ECI1-201ENST00000301729 TOP2BQ02880 1626 aa49.11■■■■■ 5.45
ECI1-201ENST00000301729 BIVM-ERCC5R4GMW8 1640 aa49.09■■■■■ 5.45
ECI1-201ENST00000301729 SYNJ1O43426 1573 aa49.05■■■■■ 5.44
ECI1-201ENST00000301729 ABCA10Q8WWZ4 1543 aa48.99■■■■■ 5.43
ECI1-201ENST00000301729 GRIN2BQ13224 1484 aa48.88■■■■■ 5.42
ECI1-201ENST00000301729 GAPVD1Q14C86 1478 aa48.85■■■■■ 5.41
ECI1-201ENST00000301729 SNAPC4Q5SXM2 1469 aa48.83■■■■■ 5.41
ECI1-201ENST00000301729 CHD1O14646 1710 aa48.83■■■■■ 5.41
ECI1-201ENST00000301729 ABCA5Q8WWZ7 1642 aa48.81■■■■■ 5.4
ECI1-201ENST00000301729 MAGI1Q96QZ7 1491 aaPredicted RBP48.8■■■■■ 5.4
ECI1-201ENST00000301729 FBLN2P98095 1184 aa48.77■■■■■ 5.4
ECI1-201ENST00000301729 PBRM1Q86U86 1689 aa48.76■■■■■ 5.4
ECI1-201ENST00000301729 CHMP7Q8WUX9 453 aaPredicted RBP48.61■■■■■ 5.37
ECI1-201ENST00000301729 SYNJ2O15056 1496 aa48.6■■■■■ 5.37
ECI1-201ENST00000301729 ERICH3Q5RHP9 1530 aa48.41■■■■■ 5.34
ECI1-201ENST00000301729 RIMBP3CA6NJZ7 1639 aa48.37■■■■■ 5.33
ECI1-201ENST00000301729 RIMBP3BA6NNM3 1639 aa48.37■■■■■ 5.33
ECI1-201ENST00000301729 RIMBP3Q9UFD9 1639 aa48.37■■■■■ 5.33
ECI1-201ENST00000301729 ADAMTS12P58397 1594 aa48.36■■■■■ 5.33
ECI1-201ENST00000301729 ARHGEF11O15085 1522 aa48.35■■■■■ 5.33
ECI1-201ENST00000301729 CLASP1Q7Z460 1538 aa48.3■■■■■ 5.32
ECI1-201ENST00000301729 FHAD1B1AJZ9 1412 aa48.28■■■■■ 5.32
ECI1-201ENST00000301729 TRIM41Q8WV44 630 aa48.27■■■■■ 5.32
ECI1-201ENST00000301729 GRIN2AQ12879 1464 aa48.25■■■■■ 5.31
ECI1-201ENST00000301729 KIF27Q86VH2 1401 aa48.19■■■■■ 5.3
ECI1-201ENST00000301729 NUP160Q12769 1436 aa48.04■■■■■ 5.28
ECI1-201ENST00000301729 CEP170Q5SW79 1584 aa48■■■■■ 5.27
ECI1-201ENST00000301729 IGF1RP08069 1367 aa48■■■■■ 5.27
ECI1-201ENST00000301729 ARAP1Q96P48 1450 aa47.93■■■■■ 5.26
ECI1-201ENST00000301729 CUL7Q14999 1698 aa47.92■■■■■ 5.26
ECI1-201ENST00000301729 CYB5RLQ6IPT4 315 aa47.91■■■■■ 5.26
ECI1-201ENST00000301729 CARMIL1Q5VZK9 1371 aa47.72■■■■■ 5.23
ECI1-201ENST00000301729 SHROOM2Q13796 1616 aa47.72■■■■■ 5.23
ECI1-201ENST00000301729 RUSC2Q8N2Y8 1516 aa47.66■■■■■ 5.22
ECI1-201ENST00000301729 ERCC6L2Q5T890 1561 aa47.58■■■■■ 5.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms