RNA–Protein interactions for RNA: ENST00000289703.8

ELK4-201, Transcript of ELK4, ETS transcription factor, humanhuman

TSL 1 (best) BASIC

Gene ELK4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK4-201ENST00000289703 NISCHQ9Y2I1 1504 aa60.74■■■■■ 7.31
ELK4-201ENST00000289703 CCDC180Q9P1Z9 1646 aa52.82■■■■■ 6.05
ELK4-201ENST00000289703 ZCCHC6Q5VYS8 1495 aaKnown RBP51.03■■■■■ 5.76
ELK4-201ENST00000289703 DCAF8L2P0C7V8 631 aa50.4■■■■■ 5.66
ELK4-201ENST00000289703 ABCC9O60706 1549 aa50.11■■■■■ 5.61
ELK4-201ENST00000289703 DCAF1Q9Y4B6 1507 aa50.09■■■■■ 5.61
ELK4-201ENST00000289703 SHROOM4Q9ULL8 1493 aa49.87■■■■■ 5.57
ELK4-201ENST00000289703 MYO15BQ96JP2 1530 aa49.44■■■■■ 5.5
ELK4-201ENST00000289703 NACADO15069 1562 aa49.2■■■■■ 5.47
ELK4-201ENST00000289703 RB1CC1Q8TDY2 1594 aa48.79■■■■■ 5.4
ELK4-201ENST00000289703 SCRIBQ14160 1630 aa48.79■■■■■ 5.4
ELK4-201ENST00000289703 SUPT5HO00267 1087 aaKnown RBP48.1■■■■■ 5.29
ELK4-201ENST00000289703 UNC13AQ9UPW8 1703 aa47.91■■■■■ 5.26
ELK4-201ENST00000289703 BICRAQ9NZM4 1560 aa47.38■■■■■ 5.18
ELK4-201ENST00000289703 PABPN1Q86U42 306 aaKnown RBP eCLIP47.35■■■■■ 5.17
ELK4-201ENST00000289703 CECR2Q9BXF3 1484 aa47.3■■■■■ 5.16
ELK4-201ENST00000289703 RSF1Q96T23 1441 aaPredicted RBP47.2■■■■■ 5.15
ELK4-201ENST00000289703 MROH2BQ7Z745 1585 aa47■■■■■ 5.11
ELK4-201ENST00000289703 BAZ1AQ9NRL2 1556 aaPredicted RBP46.87■■■■■ 5.09
ELK4-201ENST00000289703 SMARCA4P51532 1647 aa46.68■■■■■ 5.06
ELK4-201ENST00000289703 WIZO95785 1651 aa46.65■■■■■ 5.06
ELK4-201ENST00000289703 CHIC1Q5VXU3 224 aa46.26■■■■■ 5
ELK4-201ENST00000289703 TOP2AP11388 1531 aaKnown RBP46.06■■■■■ 4.96
ELK4-201ENST00000289703 PEG3Q9GZU2 1588 aa46.03■■■■■ 4.96
ELK4-201ENST00000289703 EIF4G1Q04637 1599 aaKnown RBP45.95■■■■■ 4.95
ELK4-201ENST00000289703 ATAD2BQ9ULI0 1458 aa45.91■■■■■ 4.94
ELK4-201ENST00000289703 SMARCA2P51531 1590 aa45.82■■■■■ 4.93
ELK4-201ENST00000289703 BAZ1BQ9UIG0 1483 aaKnown RBP45.67■■■■■ 4.9
ELK4-201ENST00000289703 CCDC88BA6NC98 1476 aa45.66■■■■■ 4.9
ELK4-201ENST00000289703 NCAPD3P42695 1498 aa45.44■■■■■ 4.86
ELK4-201ENST00000289703 HMGXB3Q12766 1538 aa45.36■■■■■ 4.85
ELK4-201ENST00000289703 CC2D2AQ9P2K1 1620 aa45.28■■■■■ 4.84
ELK4-201ENST00000289703 TRIM41Q8WV44 630 aa45.1■■■■■ 4.81
ELK4-201ENST00000289703 ABCC8Q09428 1581 aa44.81■■■■■ 4.76
ELK4-201ENST00000289703 LOC105371045A0A1W2PR82 267 aa44.63■■■■■ 4.73
ELK4-201ENST00000289703 CFTRP13569 1480 aa44.49■■■■■ 4.71
ELK4-201ENST00000289703 WRNQ14191 1432 aaPredicted RBP eCLIP44.42■■■■■ 4.7
ELK4-201ENST00000289703 FAM9AQ8IZU1 332 aaPredicted RBP44.41■■■■■ 4.7
ELK4-201ENST00000289703 CADPSQ9ULU8 1353 aa44.33■■■■■ 4.69
ELK4-201ENST00000289703 DNAJC5BQ9UF47 199 aa44.29■■■■■ 4.68
ELK4-201ENST00000289703 SYNJ1O43426 1573 aa44.27■■■■■ 4.68
ELK4-201ENST00000289703 PRDM2Q13029 1718 aa44.22■■■■■ 4.67
ELK4-201ENST00000289703 NESP48681 1621 aa44.03■■■■■ 4.64
ELK4-201ENST00000289703 TOP2BQ02880 1626 aa44.01■■■■■ 4.64
ELK4-201ENST00000289703 SOGA1O94964 1423 aa43.98■■■■■ 4.63
ELK4-201ENST00000289703 BIVM-ERCC5R4GMW8 1640 aa43.94■■■■■ 4.62
ELK4-201ENST00000289703 CUX1P39880 1505 aa43.93■■■■■ 4.62
ELK4-201ENST00000289703 LAMC3Q9Y6N6 1575 aa43.88■■■■■ 4.61
ELK4-201ENST00000289703 FANCD2Q9BXW9 1451 aa43.87■■■■■ 4.61
ELK4-201ENST00000289703 EHMT2Q96KQ7 1210 aa43.85■■■■■ 4.61
ELK4-201ENST00000289703 RUSC2Q8N2Y8 1516 aa43.83■■■■■ 4.61
ELK4-201ENST00000289703 EEA1Q15075 1411 aa43.72■■■■■ 4.59
ELK4-201ENST00000289703 CSRNP3Q8WYN3 585 aa43.61■■■■■ 4.57
ELK4-201ENST00000289703 CEP164Q9UPV0 1460 aa43.57■■■■■ 4.56
ELK4-201ENST00000289703 PDS5BQ9NTI5 1447 aa43.56■■■■■ 4.56
ELK4-201ENST00000289703 KIF21AQ7Z4S6 1674 aa43.44■■■■■ 4.55
ELK4-201ENST00000289703 DNMBPQ6XZF7 1577 aa43.44■■■■■ 4.54
ELK4-201ENST00000289703 FGD5Q6ZNL6 1462 aa43.44■■■■■ 4.54
ELK4-201ENST00000289703 TOPBP1Q92547 1522 aa43.4■■■■■ 4.54
ELK4-201ENST00000289703 URB2Q14146 1524 aaKnown RBP43.33■■■■■ 4.53
ELK4-201ENST00000289703 KIF27Q86VH2 1401 aa43.26■■■■■ 4.52
ELK4-201ENST00000289703 POLA1P09884 1462 aaPredicted RBP43.21■■■■■ 4.51
ELK4-201ENST00000289703 GOLGA3Q08378 1498 aa43.21■■■■■ 4.51
ELK4-201ENST00000289703 KIF21BO75037 1637 aa43.2■■■■■ 4.51
ELK4-201ENST00000289703 CUX2O14529 1486 aa43.19■■■■■ 4.5
ELK4-201ENST00000289703 TNIKQ9UKE5 1360 aa43.19■■■■■ 4.5
ELK4-201ENST00000289703 PCGF6Q9BYE7 350 aa43.16■■■■■ 4.5
ELK4-201ENST00000289703 UBTFP17480 764 aaKnown RBP43.15■■■■■ 4.5
ELK4-201ENST00000289703 RAD54L2Q9Y4B4 1467 aa43.14■■■■■ 4.5
ELK4-201ENST00000289703 RAPGEF2Q9Y4G8 1499 aa43.06■■■■■ 4.48
ELK4-201ENST00000289703 CEP162Q5TB80 1403 aa43.04■■■■■ 4.48
ELK4-201ENST00000289703 MRC2Q9UBG0 1479 aa43.01■■■■■ 4.48
ELK4-201ENST00000289703 ABCA10Q8WWZ4 1543 aa42.99■■■■■ 4.47
ELK4-201ENST00000289703 PRXQ9BXM0 1461 aa42.99■■■■■ 4.47
ELK4-201ENST00000289703 TRIM26Q12899 539 aaPredicted RBP42.92■■■■■ 4.46
ELK4-201ENST00000289703 ERCC6Q03468 1493 aa42.91■■■■■ 4.46
ELK4-201ENST00000289703 IGF1RP08069 1367 aa42.91■■■■■ 4.46
ELK4-201ENST00000289703 ERICH3Q5RHP9 1530 aa42.88■■■■■ 4.45
ELK4-201ENST00000289703 WDR97A6NE52 1622 aa42.84■■■■■ 4.45
ELK4-201ENST00000289703 WDR62O43379 1518 aa42.76■■■■■ 4.44
ELK4-201ENST00000289703 TDRD9Q8NDG6 1382 aaKnown RBP42.72■■■■■ 4.43
ELK4-201ENST00000289703 TARBP1Q13395 1621 aaKnown RBP42.72■■■■■ 4.43
ELK4-201ENST00000289703 CARMIL1Q5VZK9 1371 aa42.7■■■■■ 4.43
ELK4-201ENST00000289703 ABCA5Q8WWZ7 1642 aa42.64■■■■■ 4.42
ELK4-201ENST00000289703 THOC2Q8NI27 1593 aaKnown RBP42.64■■■■■ 4.42
ELK4-201ENST00000289703 GAPVD1Q14C86 1478 aa42.59■■■■■ 4.41
ELK4-201ENST00000289703 CLIP1P30622 1438 aa42.57■■■■■ 4.41
ELK4-201ENST00000289703 RANGAP1P46060 587 aaPredicted RBP42.57■■■■■ 4.41
ELK4-201ENST00000289703 PPARGC1BQ86YN6 1023 aaKnown RBP42.55■■■■■ 4.4
ELK4-201ENST00000289703 CUL7Q14999 1698 aa42.49■■■■■ 4.39
ELK4-201ENST00000289703 IFT140Q96RY7 1462 aa42.48■■■■■ 4.39
ELK4-201ENST00000289703 AQRO60306 1485 aaKnown RBP eCLIP42.43■■■■■ 4.38
ELK4-201ENST00000289703 ZNF608Q9ULD9 1512 aaPredicted RBP42.37■■■■■ 4.37
ELK4-201ENST00000289703 PBRM1Q86U86 1689 aa42.33■■■■■ 4.37
ELK4-201ENST00000289703 HRCP23327 699 aa42.31■■■■■ 4.36
ELK4-201ENST00000289703 VPS8Q8N3P4 1428 aa42.25■■■■■ 4.35
ELK4-201ENST00000289703 GRIN2BQ13224 1484 aa42.21■■■■■ 4.35
ELK4-201ENST00000289703 EIF4G3O43432 1585 aaKnown RBP42.17■■■■■ 4.34
ELK4-201ENST00000289703 ARAP1Q96P48 1450 aa42.13■■■■■ 4.34
ELK4-201ENST00000289703 ARHGAP35Q9NRY4 1499 aa42.11■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms